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Alexa fluor 594 conjugated goat anti rabbit igg

Manufactured by Thermo Fisher Scientific
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Alexa Fluor 594-conjugated goat anti-rabbit IgG is a secondary antibody used for immunofluorescence detection. It is a conjugate of goat anti-rabbit IgG and Alexa Fluor 594 dye, which emits red fluorescence upon excitation.

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133 protocols using alexa fluor 594 conjugated goat anti rabbit igg

1

Immunostaining of Mouse Aortic and Human Carotid Arteries

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Mouse aortic root frozen sections (n = 6) were fixed in acetone and immunostained with rabbit anti-CCL2, and NOX4 (Abcam), CCL5, IL6, and VCAM1 (Bioss), AlexaFluor 594-conjugated goat anti-rabbit IgG (Thermo Scientific), and mouse FITC-conjugated anti-α-smooth muscle actin (Sigma-Aldrich). Human carotid artery frozen sections (n = 8) were fixed in acetone and immunostained with rabbit anti-TGFβ1 (Cell Signaling Technology), anti-NOX4 (Abcam), anti-CCL2, and anti-IL6 (Bioss), AlexaFluor 594-conjugated goat anti-rabbit IgG (Thermo Scientific), and mouse FITC-conjugated anti-α-smooth muscle actin (Sigma-Aldrich). Sections were mounted in Vectashield mounting medium with DAPI for fluorescence studies (Vector Laboratories). All images were acquired with Nikon Microphot-FX microscope at the same photomultiplier tube voltage, exposure, gain and offset. Single-channel images were merged using Adobe Photoshop CC 2014.
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2

Immunofluorescent Detection of IDO1 and TDO2 in Cells

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Cells (104 in 100 mL in 50% FCS in PBS) were pelleted onto Superfrost Plus slides in a cytospin centrifuge (5 min at 400 rpm), and then blocked with 5% goat serum in TBS for 30 mins in a humidity chamber, at room temperature. Intracellular human IDO1 was detected using the same polyclonal rabbit anti-human IDO1 primary antibody (catalogue # HPAD23072) as that used for the Western Blots (Section 3.4), followed by Alexa Fluor 594 conjugated goat anti-rabbit IgG (catalogue # A11072, Invitrogen, Eugene, OR, USA). For murine IDO1, the primary antibody used was rat anti-mouse IDO (clone mIDO-48, catalogue # 122402, Biolegend, San Diego, CA, USA), followed by Alexa Fluor 594 conjugated goat anti-rat IgG secondary antibody (catalogue # 405422, Biolegend, San Diego, CA, USA). Human TDO2 was detected using polyclonal rabbit anti-human TDO2 primary antibody (catalogue # PA5-42759, ThermoFisher, Rockford, USA), followed by the same Alexa Fluor 594 conjugated goat anti-rabbit IgG secondary antibody described above. All cytospots were co-stained with DAPI to detect the nuclei of all cells and imaged using a Zeiss Axioplan 2 fluorescence microscope (Carl Zeiss Meditec, Jena, Germany) at 40× magnification.
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3

Immunofluorescence Staining of Microglia

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For MDMGs and iCell-MGs, cells cultured in coverslip chambers (LabTekII) were washed and fixed with 4% paraformaldehyde. Cells were then permeabilized with 0.1% TritonX100 and stained with a rabbit anti-P2RY12 antibody (Sigma-Aldrich; HPA014518; 1:100) or a rabbit anti-IBA1 antibody (Fujifilm Wako; catalog no. 019-19741; 1:250). Cells were then stained with Alexa594-conjugated anti-rabbit-IgG antibody (Invitrogen; catalog no. A-11072; 1:200) and DAPI (4′,6-diamidino-2-phenylindole; Sigma-Aldrich). Cells were analyzed with a Nikon SP5 confocal microscope. hiMG-hiNeuron coculture was fixed, permeabilized, and stained with a mouse anti-beta-tubulin III antibody (clone TUJ1; Stemcell Technologies; catalog no. 60052; 1:1000) and a rabbit polyclonal anti-TMEM119 antibody (Novus Biologicals; catalog no. NBP2-30551; 0.25-2 µg/ml) or a goat anti-IBA-1 antibody (Abcam; catalog no. ab5076; 1:500), followed by an Alexa Fluor 488-conjugated donkey anti-mouse IgG (Invitrogen; catalog no. A21202; 1:500) and an Alexa Fluor 594-conjugated goat anti-rabbit IgG (Invitrogen; catalog no. A11012; 1:500) or an Alexa Fluor 594-conjugated rabbit anti-goat IgG (Invitrogen; catalog no. A11080; 1:500), respectively, and DAPI (NucBlue; Invitrogen). Cells were analyzed with a Keyence BZ-X710 all-in-one fluorescence microscope. Images were analyzed with ImageJ (NIH).
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4

Immunofluorescent Detection of Babesia Parasites

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Blood obtained from mice was diluted to 1:40 in PBS and washed three times. Blood smears were fixed on glass slides with ethanol/methanol (1:1) for 1 min at – 20°C. Later, the fixed smears were blocked with 3% bovine serum albumin (BSA) in PBS for 30 min at room temperature (RT). Mouse anti-B. microti P32 (rBmP32) and rabbit anti-B. rodhaini P26 (rBrP26) polyclonal antisera were applied as the primary antibody on the fixed smears and incubated at 37°C for 1 h in a moist chamber. After washing three times with PBS and rinsing with distilled water, Alexa Fluor® 594-conjugated goat anti-rabbit IgG or Alexa Fluor® 488-conjugated anti-mouse IgG (Thermo Fisher Scientific, Massachusetts, USA) was applied as the secondary antibody (diluted 1:200 in 3% BSA in PBS) on the smears, which were incubated at 37°C for 30 min. The slides were then washed three times and incubated with 200 µg/mL Hoechst 33342 solution (Thermo Fisher Scientific) diluted in 3% BSA in PBS containing 50 mg/mL RNase (Qiagen, Hilden, Germany) at 37°C for 10 min. After washing with PBS twice, the glass slides were mounted by adding 10 mL of a 50% glycerol–PBS (v/v) solution and covered with a glass coverslip. The slides were examined and micrographs were taken using the All-in-One BZ-9000 microscope (Keyence, Illinois, USA).
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5

Quantifying ICAM-1 and VCAM-1 Expression in HUVECs

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We added rWRS to the wells of an eight-part slide culture of HUVECs at 5 µg/mL in serum-free HuMedia-EG2 medium. After 12 h of incubation at 37 °C, the cells were fixed with paraformaldehyde. After washing the cells with PBS and then blocking them with 1% fetal calf serum, they were treated with monoclonal anti-ICAM-1 antibodies (1:200; Abcam, Tokyo, Japan) and anti-VCAM-1 antibodies (1:200; Abcam) overnight at 4 °C. The cells were washed with PBS and then treated with Alexa Fluor 594-conjugated goat anti-rabbit IgG (1:1000; Thermo Fisher Scientific), followed by the staining of the nuclei with DAPI (1:1000; Thermo Fisher Scientific). We analyzed the treated cells using fluorescence microscopy (KEYENCE, Osaka, Japan) [61 (link)]. The fluorescence intensity was measured using the image processing software ImageJ.
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6

EST12 Protein Treatment in RAW264.7 Cells

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RAW264.7 cells were pretreated with MG-132 (5 μM) for 1 h and treated with 2 μM purified EST12 protein for indicated time. Media was removed from stimulated macrophages and the dishes were submerged in 4% paraformaldehyde (PFA). The fixed dishes were submerged in PBS to remove residual PFA and then cells were permeabilized with 0.1% Triton X-100 in PBS for 5 minutes at room temperature (RT), washed in PBS and blocked in PBS containing 10% donkey serum. Primary antibodies against FBW7 (28424-1-AP, Proteintech, China) and Myc (M4439, Sigma-Aldrich, USA) were used at a 1:50 dilution in PBS with 3% serum and incubated at 4°C overnight. Then Alexa Fluor 594-conjugated goat anti-rabbit IgG (A-11037, ThermoFisher, USA) or Alexa Fluor 488-conjugated goat anti-mouse IgG (A28175, ThermoFisher, USA) was used at 1:500 dilution in PBS with 3% FBS and incubated at RT for 1 h. Dishes were washed to remove the unbound secondary antibody and the cellular nuclei DNA was stained with DAPI. Fluormount-G Anti-Fade Mounting Medium (Southern Biotech) was added to each well to protect the fluorescent signal. Confocal fluorescence microscopy was performed using ZEISS LSM880 microscope and representative images were captured.
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7

Proximity Ligation Assay for Protein-Protein Interactions

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Information for special reagents: mouse anti-talin antibody, clone TA205 (Millipore Sigma, 05-385), rabbit anti-vinculin antibody (42H89L44, Invitrogen, 700062), rabbit anti-rickettsia antibody (provided by Dr David Walker), rabbit anti-Ebola virus antibody (provided by Dr Thomas Ksiazek), mouse anti-Rab5 (BD transduction, 610724) and rabbit anti-von Willebrand factor (vWF, Thermo Fisher, PA5-16634), Alexa Fluor 488-conjugated goat anti-mouse IgG (Thermo Fisher, A-11017), Alexa Fluor 594-conjugated goat anti-rabbit IgG (Thermo Fisher, A-11012), Duolink® In Situ PLA® Probe Anti-Rabbit PLUS, Affinity purified Donkey anti-Rabbit IgG(H+L) (Millipore Sigma, DUO92002-30RXN), Duolink® In Situ PLA® Probe Anti-Mouse MINUS, Affinity purified Donkey anti-Mouse IgG(H+L) (Millipore Sigma, DUO92004-30RXN), Duolink® In Situ Detection Reagents Red (Millipore Sigma, DUO92008-30RXN), Duolink® In Situ Mounting Medium with DAPI (Millipore Sigma, DUO82040-5ML), Duolink® Blocking Solution (Millipore Sigma, DUO82007-4ML), Duolink® Antibody Diluent (Millipore Sigma, DUO82008-2.5ML), Duolink® In Situ Washing Buffer A (Millipore Sigma, DUO82046-1EA), Duolink® In Situ Washing Buffer B (Millipore Sigma, DUO82048-1EA), TritonX-100 (Fisher BioReagents, BP151-100), Phalloidin iFluor 488 (Abcam, ab176753).
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8

Immunofluorescence Staining of Cellular Proteins

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HCT-116 or SW620 stable cells were grown in 4-well chamber slides (Thermo Fisher Scientific) and allowed to attach for 1 day. Cells were fixed and permeabilized with 100% methanol (prechilled at − 20 °C) at room temperature for 5 min and blocked with 1% bovine serum albumin for 1 h. Then, the cells were incubated with anti-FLAG M2, anti-BiP (Abcam), or anti-giantin (Abcam) antibodies. After washing cells with phosphate-buffered saline (PBS), they were incubated with secondary Alexa Fluor® 488-conjugated rabbit anti-mouse IgG or Alexa Fluor® 594-conjugated goat anti-rabbit IgG (Thermo Fisher Scientific) antibodies. Nucleic acids were stained with 4′,6-diamidino-2-phenylindole (Vector Laboratories). Images were acquired using a confocal laser-scanning microscope and analyzed using an LSM image examiner (Carl Zeiss).
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9

Immunofluorescent Detection of TNALP and ENPP1

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For the detection of TNALP and ENPP1, dewaxed paraffin sections were incubated with 1% BSA-PBS and then with rabbit polyclonal antibodies against TNALP at a dilution of 1:300 (1% BSA-PBS). Subsequently, they were incubated with Alexa Fluor 594-conjugated goat anti-rabbit IgG (Thermo Fisher Scientific, Inc., Waltham, MA, USA) at a dilution of 1:100 (1% BSA-PBS) for 1 h and then with goat polyclonal anti-ENPP1 at a dilution of 1:200 (1% BSA-PBS) after washing with PBS. Additionally, the sections were incubated with Alexa Fluor 488-conjugated donkey anti-goat IgG (Thermo Fisher Scientific, Inc.) at a dilution of 1:100 (1% BSA-PBS) for 1 h. After embedding the sections using VECTASHIELD hard-set mounting medium with DAPI (Vector Laboratories, Inc. Burlingame, CA, USA), the sections were observed under a light microscope.
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10

Immunofluorescence Staining of NPCs

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Each of control, Actb-knockout and Srf-overexpressing NPCs were seeded on a gelatin-coated culture plate. Cells were fixed with 4% paraformaldehyde (Nacalai Tesque) and permeabilized with 0.5% TritonX-100 in PBS. These cells were treated with Blocking One (Nacalai Tesque) and reacted with Rabbit anti-Mkl1 antibody (Abcam, 49311) at a 1:200 dilution overnight. Specimens were subsequently reacted with Alexa Fluor 594-conjugated goat anti-rabbit IgG (Thermo Fisher Scientific, A-11012) at a 1:500 dilution and mounted with VECTASHIELD Mounting Medium (Vector Laboratories) followed by observation using an inverted IX73 fluorescence microscope (Olympus).
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