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Vectashield vibrance antifade mounting medium with dapi

Manufactured by Vector Laboratories
Sourced in United States

VECTASHIELD Vibrance Antifade Mounting Medium with DAPI is a high-performance mounting medium designed to preserve fluorescent signals in microscopy samples. It contains an antifade reagent to minimize photobleaching and DAPI, a DNA-binding dye that stains nuclei.

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22 protocols using vectashield vibrance antifade mounting medium with dapi

1

Whole-section Fluorescence Imaging Protocol

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H&E staining was performed by Yale Pathology Tissue Services (YPTS). For whole-section fluorescence imaging, the section was mounted in VECTASHIELD Vibrance Antifade Mounting Medium with DAPI (VectorLabs, H-1800–2). Stitched fluorescence images in 353-nm, 488-nm and 592-nm illumination channels for DAPI, GFP, and tdTomato, respectively, were collected with a Plan-Apochromat 10×/0.45 M27 objective on a Zeiss Axio Imager M2 microscope.
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2

pH-Responsive TROS Delivery of Propidium Iodide

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Propidium iodide was used in place of IR780 to evaluate cell internalization prior to dye release. Propidium iodide usually emits green fluorescence, but when bound to nucleic acid, red fluorescence is instead emitted. Propidium iodide is usually impermeable to the cell membrane, but can be allowed entry into the cell by encapsulation within TROS. S2VP10 cells were grown to confluency in a 6-well plate containing 12mm cover glasses in wells. Cells were grown overnight in DMEM with 10% FBS and 1% L-glutamine. pH-specific DMEM (pH 7.4 or 6.6) was used to mimic benign and malignant conditions for pH-specific internalization and release. 80 μL of PBS (control) or V7-TROS with propidium iodide was added to the plate for 1.5 hr. Plates with then fixed with 4% formaldehyde for 10 min at room temperature. Cells were washed with PBS to remove free TROS and propidium iodide. The cover glasses were removed and mounted with VectaShield Vibrance Antifade Mounting Medium with DAPI (Vector Laboratories, Burlingame, CA). The samples were dried in the darkness for 2 hrs. Images were taken at 400X magnification using a Leica SP8 Confocal Microscope. Fluorescence counts of images were determined through channel splitting and thresholding via ImageJ.
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3

Tissue Histology and Immunofluorescence Staining

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Tissues were fixed overnight in 10% formalin, dehydrated in ethanol, embedded in paraffin, and cut into 5 µm sections. Picrosirius Red staining was performed with the Picro Sirius Red Stain Kit (Abcam) according to the manufacturer’s instructions. Masson’s trichrome staining was performed with the Masson’s Trichrome Stain Kit (Polysciences) according to the manufacturer’s instructions. For immunofluorescence staining, sections were de-paraffinized with Histo-Clear II (National Diagnostics) and rehydrated according to the manufacturer’s instructions. Antigen retrieval was performed for 40 min in citrate buffer pH 6.0 (Vector Laboratories) in a steamer (IHC World). Sections were blocked in 5% BSA and 5% normal goat serum (Cell Signaling) in TBS containing 0.1% Tween-20, and incubated in primary antibodies at 4°C in a humidified chamber overnight. Sections were incubated in secondary antibody in blocking solution for 1h at room temperature and mounted in Vectashield Vibrance Antifade Mounting Medium with DAPI (Vector Laboratories). The following primary antibodies were used: SMA (1:400; Millipore, CBL171), CK8 (1:200; DSHB, TROMA-I). The following secondary antibodies were used: donkey anti-mouse Alexa-Fluor 488, donkey anti-rat Alexa Fluor 647 (1:1,000; Thermo Scientific).
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4

Immunofluorescence Staining of Neurospheres

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Invasive neurospheres seeded in Lab-Tek chamber slides coated with Matrigel were fixed with 4% PFA for 15 min at RT. Quenching and permeabilization steps were performed using PBS solution containing 5% BSA (Sigma–Aldrich, Burlington, MA, USA) and 0.3% Triton-X100. The primary antibody, anti-GPM6A (Genetex, Irvine, CA, USA), was incubated in PBS 5% BSA and 0.3% Triton-X100 solution for 2 h. The secondary antibody, Donkey anti-Rabbit Alexa Fluor™ 488 (Invitrogen), or Phalloidin–iFluor 594 conjugate (AATBioquest, Sunnyvale, CA, USA) were incubated for 1 h in PBS 5% BSA and 0.3% Triton-X100. Mounting was performed with VECTASHIELD Vibrance® Antifade Mounting Medium with DAPI (Vector Laboratories, Newark, CA, USA). Immunofluorescence stains were analyzed on a Nikon Eclipse Ti with the Nikon software NIS Element AR and on a LSM 880 Fast Airyscan-Zeiss inverted confocal microscope with the Zeiss software Zen 2.
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5

Immunofluorescence Staining of Cells on CELLview Slides

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Cells on CELLview slides (Greiner Bio-One) were fixed with 4% (vol/vol) paraformaldehyde (PFA)/PBS at room temperature for 20 min, permeabilized with 0.1% Triton X-100/4% PFA/PBS at room temperature for 20 min, and incubated with human Fc receptor blocking solution (5% FBS/PBS containing 10% of Clear Back; MBL Life Science) at room temperature for 1 h. Cells were stained with the primary antibodies diluted in 5% FBS/PBS overnight at 4°C (1:100 for anti-gB polyclonal antibody, anti-gB Mab, and anti-TGN46 antibody), washed with 0.1% Tween 20/PBS (PBS-T) for 5 min three times, stained with secondary antibodies (1:300) diluted in 5% FBS/PBS at room temperature for 1 h, washed with PBS-T for 5 min 3 times, covered with VECTASHIELD Vibrance Antifade Mounting Medium with DAPI (Vector Laboratories), and imaged by an FV1000D confocal microscopy (Olympus).
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6

Immunolocalization of NFAT Transcription Factors

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Cells grown on glass coverslips were fixed in 4% paraformaldehyde for 10 min at room temperature, permeabilized with 100% MetOH for 10 min at −20 °C and incubated in a blocking solution containing 3% donkey serum and 10% FBS in 0.1% Triton-X-100 in PBS. Immunostaining was performed with mouse anti-human NFATc1 and rabbit anti-human NFATc3 antibodies, followed by donkey anti-mouse or anti-rabbit AlexaFluor 555-conjugated antibodies, respectively. After final washing in PBS, the coverslips were dried, mounted on slides with Vectashield Vibrance antifade mounting medium with DAPI (Vector Laboratories, Burlingame, CA, USA) and visualized with a confocal microscope (Fluoview FV10i, Olympus Corp., Tokyo, Japan).
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7

Comprehensive Cellular Analysis Protocol

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For immunostaining, cells were fixed in 4% formaldehyde, permeabilised, blocked, incubated with primary and fluorescent secondary antibodies, and mounted in Vectashield Vibrance Antifade Mounting Medium with DAPI (Vector Laboratories, USA).
Proteins were resolved in SDS-PAGE, transferred to nitrocellulose membranes and blotted with specific primary and horseradish-conjugated secondary antibodies (ESM Table 6).
mRNA was isolated and reverse transcribed as described [36 (link)]. Gene expression was assessed on a MyiQ2 Single-Color Real-Time PCR System (Bio-Rad, USA). GAPDH and/or beta-actin (ACTB) were used as reference genes.
Intracellular reactive oxygen species were detected using the fluorescent probe hydroxyphenyl fluorescein (HPF; Invitrogen, USA).
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8

Immunofluorescence Staining of FFPE Tumor Sections

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FFPE mouse tumor specimens (iBIP and Yumm1.7) were sectioned with a microtome (5-μm sections) and put on slides. After deparaffinization, citrate-based antigen retrieval was performed. Blocking was performed using Normal Horse Serum. Slides were then incubated with the following primary antibodies overnight at 4°C in a humid chamber: anti-Cxcr3 (#LS‑B10183, LSBio) and anti-CD8 (#14–0808-82, Clone 4SM15, Invitrogen). Slides were then incubated with fluorescence-conjugated anti-rabbit or anti-rat secondary antibodies (#A11008 Alexa Fluor 488, #A21247 Alexa Fluor 647, ThermoScientific). Processed slides were counterstained with hematoxylin. Slides were processed with TrueVIEW Autofluorescence Quenching Kit (#SP8400, Vector Labs), and coverslips were mounted using VECTASHIELD Vibrance Antifade Mounting Medium with DAPI (#H1800, Vector Labs). Images were digitally acquired with the ImageXpress Pico Imaging system (Molecular Devices). Quantification was performed using the CellReporterXpress Image Acquisition and Analysis Software v2.0 (Molecular Devices).
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9

Immunofluorescence Analysis of Bone Markers

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Double immunofluorescent staining was performed using the following primary antibodies: mouse anti-NF-κB p65 (dilution ratio: 1:150; Santa Cruz Biotechnology, Dallas, TX, USA), rabbit anti-CTSK (1:150; Abcam), rabbit anti-RANKL (1:150; Proteintech Group Inc., Rosemont, IL, USA), rabbit anti-OPG (1:150; Abcam), rabbit anti-OPN (1:200; Abcam), and rabbit anti-OCN (1:200; Abcam). The sections were first blocked using 5% bovine serum albumin and were then incubated with a specific primary antibody, followed by species-matched secondary antibodies (Donkey Anti-Rabbit IgG H&L Alexa Fluor 594 and Donkey Anti-Rabbit IgG H&L Alexa Fluor 488; Abcam), at a 1:200 dilution. All tissue sections were subjected to autofluorescence quenching (Vector TrueVIEW; Vector Laboratories, Inc.) and mounted with VECTASHIELD Vibrance Antifade Mounting Medium with DAPI (Vector Laboratories, Inc.) following the manufacturer’s protocol. Fluorescent images were acquired using a Leica TCS-SP8 confocal laser scanning microscope (Leica Biosystems, Wetzlar, Germany) within 48 h after mounting. The immunofluorescence expression of each sample was evaluated using the MFI; a.u.).
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10

Immunostaining Protocol for Olfactory Markers

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Deparaffinized sections were boiled for 20 min in 10 mM citrate buffer (pH 6) (Genemed Biotechnologies) for antigen retrieval, rinsed in distilled water, and then blocked with 3% normal goat serum (Vector Laboratories) in PBS for 1 h at room temperature. The sections were incubated with primary antibodies in PBS or Can Get Signal immunostain solution (Toyobo, Osaka, Japan) for 1 h at room temperature. The primary antibodies were as follows: rabbit anti-GFAP, rabbit anti-Iba1, rabbit anti-NeuN, and rabbit anti-olfactory marker protein (OMP) (#ab183947, 1:1,000; Abcam, Cambridge, UK). After washing in PBS, the sections were incubated with Alexa Fluor 488- or 594-conjugated goat anti-rabbit IgG antibodies (#A31627 and #A-11012, 1:1,000; Thermo Fisher Scientific, Waltham, MA, USA) in PBS or Can Get Signal immunostain solution for 1 h at room temperature, washed in PBS, and mounted using VECTASHIELD Vibrance Antifade Mounting Medium with DAPI (Vector Laboratories). All images were captured and analyzed using the ECLIPSE Ti confocal microscope (Nikon Instruments) with NIS-Elements AR imaging software version 4.00.06 (Nikon Instruments). The number of OMP-positive cells was measured in all bilateral subareas, and their mean values were calculated for each animal.
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