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12 protocols using lc 2030c plus

1

Batch Fermentation Analysis Protocol

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Liquid and headspace samples were taken periodically over the course of batch fermentations and analysed for biomass, substrate and product concentrations. Biomass growth was measured by optical density at 600 nm (OD600). Biomass concentration (mgCDW L-1) was estimated from OD600 measurements using the correlation: mgCDW L-1 = (OD600 - 0.016)/0.0032, which was experimentally determined from A. neopropionicum cultures grown on ethanol. Concentrations of soluble compounds in the supernatant of liquid samples were determined using high-pressure liquid chromatography (HPLC) (LC-2030C Plus, Shimadzu, USA). The HPLC was equipped with a Shodex SH1821 column operated at 65oC. A solution of 0.1 N H2SO4 was used as mobile phase, at a flowrate of 1 mL/min. Detection was done via a refractive index detector. Concentrations below 0.2 mM could not be accurately quantified and are considered traces. Concentrations of gases in headspace samples were determined via gas chromatography (GC) (Compact GC 4.0, Global Analyser Solutions, The Netherlands). To analyse H2, a Molsieve 5A column operated at 140oC coupled to a Carboxen 1010 column was used. CO2 was analysed in a RT-Q-BOND column at 60oC.
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2

Quantification of Licofelone Release

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Reverse phase-HPLC (RP-HPLC, Shimadzu, LC-2030C Plus) (Fig. S.5) was used to quantify the amount of the licofelone in the buffer and the cartilage digested buffer. The system was equipped with a C18 column (Kinetex 5 μm C18 100 Å, LC Column 250 × 4.6 mm) and UV-detector, which was at 248 nm. The mobile phase consisted of 50% PBS pH 7.4 and 50% ACN at a 1 mL min−1 flow rate. The licofelone conjugate samples were prepared at a concentration of 3 mg mL−1 in a mixture of pH 7.4 PBS and DMSO (75 : 25, v : v). 1 mL of the solution was transferred into HPLC vail for quantification based on the licofelone standard calibration curve using the RP-HPLC method. 10 μL of pH 7.4 PBS and DMSO (75 : 25, v : v) was added to replace the volume that was injected in the HPLC. The quantity of the released licofelone was determined for up to 120 hours.
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3

Rapamycin Extraction and Quantification

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After 72 hours of drug administration, mice were euthanized, and the aorta was isolated. The aorta was minced and homogenized in 0.2 mL of saline. Then, 0.2 mL of sodium carbonate was added and vortexed for 1 minute. After vortexing, 10 mL of tert-butyl methyl ether was added and vortexed for 15 minutes to extract rapamycin. The supernatant was obtained by centrifugation at 5000 rpm for 5 minutes. The residual samples were dissolved in 100 μL methanol solution and analyzed by HPLC (Shimadzu LC-2030C Plus) with a reversed-phase column (4.6 × 250 mm, 5 μm). The mobile phase comprised acetonitrile and water with a volume ratio of 7:3, and the flow rate was set as 1.2 mL/minute. The column temperature was 55 °C, and the detection wavelength was 278 nm.
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4

Metronidazole Stress Study and Photolytic Degradant Analysis

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In the stress study of metronidazole in aqueous solutions and the vaginal lotion, as well as in further verification testing of its major photolytic degradant, the LC system (Shimadzu, Darul Khusus, Malaysia) consisted of a binary pump (LC-2030C plus), an autosampler (LC-2030C plus), a photo diode array (PDA) detector (LC-2030C plus) and a LC-2030C plus column oven. Data acquisition, analysis and reporting were performed using Shimadzu LC-Solution software. The starting chromatographic conditions chosen were based on available compendial monographs of metronidazole7 –11 . The Kromasil 100-5 C18 column (250 mm × 4.6 mm i.d., 5 μm) (AkzoNobel, Bohus, Sweden) was maintained at 30 °C. Mobile phase A (0.05 mol/L KH2PO4 in water) and mobile phase B (methanol) were pumped at a total flow rate of 1.0 mL/min. The gradient program (time (min), % B) was set as: (0, 20), (12, 20), (30, 40), (40, 40), (45, 70), (50, 70), (51, 20), (60, 20). Sample solutions were 0.2 mg/mL of metronidazole in methanol–water (20:80, v/v) and the system suitability solution contained 1 μg/mL of metronidazole RS, 2-methyl-5-nitroimidazole RS and N-(2-hydroxyethyl)-5-methyl -l,2,4-oxadiazole-3-carboxamide RS, respectively. The injection volume was 10 μL and detection wavelengths were set at 315 nm and 230 nm simultaneously.
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5

Ultrasound-aided HPLC Analysis of P5091@RMPs-R4F

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Ultrasound of P5091@RMPs‐R4F was performed in methanol solution following centrifugation (14 000 g, 10 min). Then, the supernatants were filtered (0.2 µm filters) for HPLC (LC‐2030C Plus, designed by Shimadzu Corporation in Japan). A C18 (250 × 4.6 mm, 5 µm particle size) HPLC packed column was used as the chromatographic column. The mobile phase was CH3OH 0.5%TFA/H2O 0.5% TFA (1:1, v/v), the flow rate was 1.0 mL min−1, and the detection wavelength was 254 nm.
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6

Comprehensive Metabolite Analysis Protocol

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Glucose and lactate concentrations were determined by High-Performance Liquid Chromatography (HPLC). Samples are analyzed on a Shimadzu Prominence LC-2030C Plus with an RI detector (RID-20A). An isocratic method of 15 min on a Rezex ROA-Organic Acid H+ (8%) column (Phenomenex—part number 00F-0138-K0 + SecurityGuard Cartridge Kit (KJ0-4282) + SecurityGuard Cartridges Carbo-H 4 × 3.0 mm ID (AJ0-4490)) was used. The mobile phase was 5 mM sulfuric acid (Chem-lab CL00.2653.0050). The column temperature was 60°C and the temperature of samples was 4°C. The detection of glucose was done with an RI detector and the detection of lactate with a UV detector (210 nm).
Carboxylic acids (acetate, propionate, butyrate, iso-butyrate, valerate, iso-valerate, and caproate) were determined by gas chromatography (GC) with flame ionization detection (FID) as described by Candry et al. (2020) (link) after the extraction of acids into diethyl ether as described by Andersen et al. (2014) (link).
The gaseous head space composition was analyzed using a Compact Gas Chromatograph (Global Analyser Solutions, Breda, Netherlands), equipped with a Molsieve 5A pre-column and Porabond column (CH4, O2, H2, and N2), and a Rt-Q-bond pre-column and column (CO2). Concentrations of gases were determined using a thermal conductivity detector.
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7

HPLC Analysis of DCF and IBP

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The concentrations of DCF and IBP were measured using high-performance-liquid chromatography (HPLC; Shimadzu, LC-2030C plus) equipped with an ultraviolet detector and an analytical column: NUCLEODUR 100-5 C18 (250 mm × 4.6 mm, 5 μm pore size, Agilent). The injection volume was 10 μL and the flow rate was 1.0 mL min−1. The eluent conditions were 40% 0.1 M sodium acetate and 60% methanol solution for DCF and 40% 0.1 M chloroacetic acid and 60% acetonitrile for IBP keeping for 30 min at 254 and 264 nm, respectively. Leached metal ions in the aqueous solution after treatment reaction was measured using inductively coupled plasm atomic emission spectroscopy (ICPE-9820, Shimadzu). Total organic carbon (TOC) removal was used to calculate the mineralization efficiency using a TOC-Analyzer (TOC-VCPH, Shimadzu).
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8

HPLC Quantification of Bioactive Compounds

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High-performance liquid chromatography (HPLC, LC-2030C Plus, Shimadzu Corporation, Japan) was used to measure the content of LUT, SIT, MYA, and VAN in YFBP. A volume of 51.00 g of YFBP was accurately weighed and 100 ml of methanol was added, and the mixture was ultrasonicated for 12 h at 60°C. The extracts were filtered using a filter paper and concentrated to 1.00 g crude drug per ml. The concentrated solution was taken and passed through a 0.22-µm microporous membrane, and the content of LUT, SIT, MYA, or VAN was determined by HPLC. LUT, SIT, MYA, or VAN standards were accurately weighed and dissolved in methanol as the stock solution. Chromatography was performed on a C18 column (5 μm C18, 4.6 × 250 mm) at 35°C. LUT was eluted with a mobile phase (methanol/0.1% phosphoric acid water at a ratio of 50:50) at a flow rate of 0.5 ml/min and monitored at 350 nm. SIT was eluted with a mobile phase (methanol/water at a ratio of 55:45) at a flow rate of 0.5 ml/min and monitored at 210 nm. MYA was eluted with a mobile phase (acetonitrile/water at a ratio of 33:67) at a flow rate of 0.5 ml/min and monitored at 270 nm. VAN was eluted with a mobile phase (acetonitrile/0.1% phosphoric acid water at a ratio of 13:87) at a flow rate of 0.5 ml/min and monitored at 281 nm. The chromatograms were recorded and integrated using LabSolutions System software.
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9

Biomass Composition and Biogas Analysis

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The neutral detergent fiber (NDF), acid detergent fiber (ADF) and acid detergent lignin (ADL) were determined using an ANKOM 2000 I, fiber Analyzer (ANKOM Technology Corporation, NY 14502, USA).
The dry matter content (TS) was analyzed with a moisture analyzer Ohaus MB 45. The volatile solids (VS) were analyzed as loss on ignition at 550 °C. The pH of the samples before and after pretreatment, hydrolysis, and fermentation was measured using a pH meter, model SevenCompact pH/Ion S220 from Mettler-Toledo AG (Schwerzenbach, Switzerland).
Glucose, glycerol, acetic acid, and ethanol were quantified by HPLC (LC-2030C Plus, Shimadzu, Kyoto, Japan) equipped with a refractive index detector (RID-20A, Shimadzu, Kyoto, Japan) using a Rezex ROA Organic Acid column (Phenomenex, Torrance, CA, USA) column at 45 °C, and isocratic elution at 0.6 mL/min of 5 mmol/L H2SO4.
The quantification of methane in the produced biogas was done by gas chromatography (CP-4900 Micro-GC, from Varian Inc., Palo Alto, USA).
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10

Quantification of RSL3 and CT20p in RMPs

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The concentration of RSL3 in RMPs was measured by HPLC. HPLC analysis was conducted using a LC-2030C Plus instrument (Shimadzu, Japan). The separation was implemented with a ShimNex C18 chromatographic column (4.6 × 250 mm, 5 μm, 100 A, Shimadzu, Japan). Three times volume of acetonitrile was mixed with RMPs and then added chloroform (1:2, v/v). After vortexed, the mixture was centrifuged at 10,000 g for 5 min and the lower layer was extracted for measurement. As the standard solution, 10 mg RSL3 was dissolved in acetonitrile and chloroform in a ratio the same as RMPs. All the samples were filtered through a 0.45 μm polytetrafluoroethylene filter. The components were separated and eluted by mobile phase eluted (A: methanol; B: acetonitrile) in the column at 25 °C with a flow rate of 1 mL min−1. An ultraviolet wavelength (254 nm) was selected for the detection of RSL3. For CT20p detection, FITC-CT20p was capsuled into RMPs by electroporation in different conditions and relative fluorescence units (RFU) was measured via SpectraMax® iD3 microplate reader (MOLECULAR DEVICES, CA, USA).
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