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27 protocols using dcfh da

1

Apoptosis, Mitochondrial Potential, and ROS Analysis

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Cells were trypsinized and resuspended in 1X binding buffer, and stained using the Annexin-V-FITC/PI Apoptosis Detection kit (40305ES50, Yeasen Biotechnology, Shanghai, China). The cells were then washed with PBS, and cell apoptosis was analyzed using flow cytometry (FACSCalibur, BD, Biosciences, USA). Mitochondrial membrane potential detection: Cells were tripsinized and resuspended in 1X binding buffer, and stained using the JC1 staining solution (40705ES03, Yeasen Biotechnology, Shanghai, China) following the instruction manual. The cells were re-suspended with fresh culture solution for subsequent flow cytometry analysis. Reactive oxygen species (ROS) detection: DCFH-DA (50101ES01,Yeasen Biotechnology, Shanghai, China)was diluted in serum-free medium at 1:1000 to a final concentration of 10 μM; Cells were tripsinized and resuspended in appropriate volume of diluted DCFH-DA working solution. After staining, the cells were re-suspended with fresh serum-free medium and immediately detected by flow cytometry.
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2

Quantifying Intracellular ROS Levels

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The ROS assay kit is based on the oxidation and subsequent change in fluorescence intensity of 2, 7-dichlorodi-hydrofluorescein diacetate (DCFH-DA) in the presence of ROS. It is the most commonly used method for the quantitative determination of intracellular ROS levels. SH-SY5Y cells stimulated with MPP+ were incubated with 100 μM DCFH-DA (Yeasen, Shanghai, China) at 37°C in the dark for 30 min. Fluorescence intensity was determined using a microplate reader according to the manufacturer’s instructions.
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3

Cellular ROS Detection by DCFH-DA and DHE

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2,7-Dichlorodihydrofluorescein diacetate (DCFH-DA, 50101ES01, Yeasen, China) is an indicator of intracellular ROS. Dihydroethidium (DHE, 50102ES25, Yeasen, China) is a specific fluorescent probe that detects superoxide anions. Briefly, samples were stained with DCFH-DA (10 μM) or DHE (10 μM) at 37°C for 30 min. After washing twice with PBS, the cells were analyzed by confocal microscopy (FV10i, Olympus, Japan).
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4

Measuring Cellular ROS Production

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The ROS production in different samples was determined by 2,7-dichlorodihydrofluorescein diacetate (DCFH-DA) (YEASEN, Shanghai, China). Briefly, HK-2 cells were seeded in the 6-well plates at 2 × 105 cells/well and pretreated with 0, 1, 10 and 50 µM zoledronate at 37 °C for 6 h, and then 500 µl DCFH-DA (10 µM final concentration) was added to each well incubated at 37 °C for 30 min. After washing three times with PBS, cells were harvested by cell scrapers and resuspended in PBS, were analyzed immediately using flow cytometry (Ex = 488 nm, Em = 525 nm).
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5

MRSA ROS Generation Assay

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MRSA suspensions (108 CFU/mL) were added into 6-well plates and treated with blank LB, EM, M-LFLIU, or EM+M-LFLIU (EM, 6.25 μg/mL, and M-LFLIU, 1 W/cm2). After treatment, the suspensions were incubated at 37°C for 3 h, and the bacterial cells were collected, stained with DCFH-DA (2′,7′-dichlorodihydrofluorescein diacetate; Yeasen, Shanghai, China) at 37°C for 30 min, and imaged under a confocal microscope. The ROS-positive rates for each sample were measured by a CytoFlex S flow cytometer (Beckman Coulter, USA).
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6

MRSA ROS Generation Assay

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MRSA suspensions (108 CFU/mL) were added into 6-well plates and treated with blank LB, EM, M-LFLIU, or EM+M-LFLIU (EM, 6.25 μg/mL, and M-LFLIU, 1 W/cm2). After treatment, the suspensions were incubated at 37°C for 3 h, and the bacterial cells were collected, stained with DCFH-DA (2′,7′-dichlorodihydrofluorescein diacetate; Yeasen, Shanghai, China) at 37°C for 30 min, and imaged under a confocal microscope. The ROS-positive rates for each sample were measured by a CytoFlex S flow cytometer (Beckman Coulter, USA).
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7

Spinal Cord Single-Cell ROS Measurement

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After anesthesia, mice were intracardially perfused with ice-cold PBS to remove the blood. Next, the L3–L5 spinal cord was dissected to prepare a single-cell suspension. The isolated cells were diluted to 1 × 107 cells/mL and seeded into a 24-well plate. The cells were then incubated with DCFH-DA (10 μM, 50101ES01, Yeasen Biotechnology, China) for 30 min at 37 °C. After washing the cells thrice with serum-free medium, they were suspended in PBS and analyzed by flow cytometry.
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8

Quantitative Intracellular ROS Measurement

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Measurement of intracellular ROS was performed using 2,7-dichlorofluorescin-diacetate (DCFH-DA) (Yeasen, Shanghai, China). Cells were incubated with 10 μM DCFH-DA diluted in RPMI-1640 medium for 30 min at 37 °C in the dark. The cells were then immediately observed under the fluorescence microscope. Fluorescence intensity was quantified using ImageJ software. For flow cytometry, cells were collected for analysis. For tissue ROS measurement, frozen tumour sections were incubated with DCFH-DA (Item No: E004, Jiancheng Bioengineering, Nanjing, China) at 37 °C for 30 min. The ROS level in the tissue was measured under the BX41 fluorescence microscope.
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9

Oxidative Stress and Cell Viability Assays

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UDCA (MCE, cat: HY-13771); fetal bovine serum (Biological Industries); trypsin (Beyotime, cat: C0201), penicillin–streptomycin (Beyotime, cat: C0222), reactive oxygen fluorescent probe (DCFH-DA, Yeasen, cat: 50101ES01); reverse transcription kit (Vazyme; code: R333-01); DMEM medium (Gibco), hydrogen peroxide (H2O2, Sigma, CAS-No: 7722-84-1); SYBR Green Mix (Vazyme); CCK-8 kit (Beyotime, cat: C0037); H2O2 kit (Solarbio, cat: BC353); and H2O2 kit (Solarbio, cat: BC3595); MDA kit (Beyotime; cat: S0131S); SOD kit (Beyotime; cat: S0101S); ROS kit (Yeasen; cat: 50101ES01).
Enzyme Labeling Instrument (BioTek, cat: Cytation3); Fluorescence Quantitative PCR Instrument (Applied Biosystems, USA, ABI PRISM®7900HT system).
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10

Exosome Isolation and Characterization

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Lipofectamine 2000, Dulbecco's modified Eagle's medium (DMEM), α‐minimal essential medium (α‐MEM), Opti‐MEM, fetal bovine serum, horse serum, penicillin‐streptomycin, 0.25% trypsin‐EDTA, DiO dye, Exosome Spin Columns, Micro BCA Protein Assay kit, as well as CD11b, CD86, CD206, CD11c, CD80 monoclonal antibodies were purchased from Thermo Fisher Scientific, USA. Calnexin, CD9, CD63 and CD81, FASL, Caspase‐3, Caspase‐8, and PARP antibodies were purchased from Abcam. 3‐(4, 5‐dimethylthiazol‐2‐yl)‐2,5‐diphenyltetrazolium bromide (MTT), RNAlater, dimethyl sulfoxide (DMSO), LysoTracker Green DND‐26, isothiocyanate‐labeled phalloidin and Hoechst 33342 were purchased from Sigma Aldrich, USA. Filter membranes and ultrafilter tubes were purchased from Millipore (Shanghai, China). Cy5‐labeled siRNA (Cy5‐NC), siPLK1 (targeting PLK1), and siPD‐L1 (targeting PD‐L1) were supplied by Suzhou Ribo Life Science Co., Ltd. (Suzhou, China) or Suzhou Biosyntech Co., Ltd (Suzhou, China). All the primers were provided by BioSune Co., Ltd (Shanghai, China). DCFH‐DA, Annexin V‐FITC/PI Apoptosis Detection Kit, and Hieff qPCR SYBR Green Master Mix were purchased from Yeasen (Shanghai, China). Chlorin e6 (Ce6) was purchased from Macklin Biochemical Technology Co., Ltd (Shanghai, China). Optimal cutting temperature (OCT) compound was from Sakura Finetek USA, Inc. (Torracne, CA90501, USA).
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