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91 protocols using kanamycin sulfate

1

Inducing Ototoxic Hearing Loss in Mice

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The mice were randomly divided into 2 groups. The SGN degenerative group (experimental group) was subcutaneously injected with 1 g/kg kanamycin sulfate (Sigma-Aldrich, E004000), and after 30 ~ 45 min, 0.4 g/kg furosemide (Tianjin Pharmaceutical Group, H12020527; 10 mg/ml) was injected intraperitoneally [19,20,51]. Mice in the experimental group were subgrouped on the 5th, 15th, and 30th day after drug administration, with 16 mice in each subgroup. Sixteen mice that were the same age served as the blank control group and were simultaneously treated with equal doses of saline by subcutaneous and intraperitoneal injections.
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2

Antibiotic Sensitivity of Multidrug-Resistant Salmonella

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Multidrug-resistant Salmonella (ATCC 700408) was obtained from the American Type Culture Collection (Manassas, VA). Silver nitrate, sodium borohydride, sodium citrate, NaOH, tetracycline hydrochloride (TET), neomycin sulfate (NEO), kanamycin sulfate (KAN), tryptic soy broth (TSB), and tryptic soy agar (TSA) were purchased from Sigma-Aldrich (St. Louis, MO). Penicillin G sodium salt (PEN) and nitric acid (trace metal grade, 67%–70%) were from Fisher Scientific (Houston, TX). Ampicillin sodium salt (AMP) was from Research Products International Corp (Prospect, IL), and enoxacin hydrochloride (ENO) was from MP Biomedicals LLC (Solon, OH). The structures of the antibiotics are shown in Figure SI 1.
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3

Recombinant BCG Strains for Imaging

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Construction of the recombinant strains rBCG::noPGL, rBCG::PGL-b, rBCG::PGL-I have been described previously (17 (link), 21 (link)). The various recombinant strains were transformed with plasmid pWM124, a mycobacterial replicative plasmid carrying the gfp gene under the control of the pblaF* promotor (17 (link)). Strains were cultured in Middlebrook 7H9 broth (Invitrogen, Cergy-Pontoise, France) containing 0.05% Tween 80 (Sigma-Aldrich, St. Louis, USA) and ADC (5% BSA fraction V, 2% dextrose, 0.003% beef catalase and 0.85% NaCl; BD Microbiology Systems) and supplemented with 40 μg/ml of Kanamycin sulfate (Sigma-Aldrich, St. Louis, USA) or 50 μg/ml of Hygromycin B (Sigma-Aldrich, St. Louis, USA) for the fluorescent strains. Ten days before infection, bacteria were inoculated into 7H9 with ADC without Tween 80. Bacteria were pelleted at 3,000× g 10 min, washed and suspended in PBS. Clumps were dispersed by vortex with 4 mm diameter glass beads. Bacteria were centrifuged (200× g) for 5 min and concentration of bacterial suspensions was measured by OD 600 nm (1 OD = 108 bacilli/ml). To assess CFUs, serial dilutions were plated on Middlebrook 7H11 agar plates supplemented with OADC (ADC supplemented with 0.05% oleic acid).
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4

Bacterial Culture Media and Buffers Preparation

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Salts and other ingredients for buffers and
bacteria culture media,
dopamine hydrochloride, fetal bovine serum (FBS), l-glutamine,
sodium l-(+)-lactate, kanamycin sulfate, β-d-1-thiogalactopyranoside (IPTG), and phosphate-buffered saline (PBS)
were obtained from Sigma-Aldrich (St. Louis, MO). Alginic acid sodium
salt from brown algae (ref 71238), poly-l-lysine hydrochloride
(MW 15 000–30 000 Da), and low-molecular-weight
chitosan (ref 448869) were also supplied by Sigma-Aldrich. Chemically
competent E. coli NEB5α cells
were purchased from New England Biolabs (NEB, MA).
M9 culture
medium was prepared with 33.7 mM Na2HPO4, 22
mM KH2PO4, 8.55 mM NaCl, and 9.35
mM NH4Cl as 10× stock and autoclaved. It was supplemented
with 0.4% d-glucose (or glycerol), 1 mM MgSO4,
0.3 mM CaCl2, and 1 mg/L thiamine from stocks that were
prepared separately and filter-sterilized. Krebs–Ringer N-(2-hydroxyethyl)piperazine-N′-ethanesulfonic
acid (HEPES) (KRH buffer) buffer was prepared with 20 mM HEPES, 135
mM NaCl, 5 mM KCl, 0.4 mM K2HPO4, adjusted to
pH 7.4, autoclaved, and supplemented with 1 mM MgSO4, and
1 mM CaCl2 from stocks prepared separately and filter-sterilized.
Incubation buffer (buffer A) consisted of 10 mM HEPES, 150 mM NaCl,
20 mM CaCl2, and disruption buffer (buffer B) of 0.1 M
ethylenediaminetetraacetic acid (EDTA) and 0.2 M potassium citrate;
both were filter-sterilized.
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5

Recombinant Protein Expression Reagents

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Proli-NONOate was from Cayman chemicals, UK. Sodium phosphate (sodium dihydrogen orthophosphate and disodium hydrogen orthophosphate), sodium chloride, sodium tetraborate, sodium imidazole, kanamycin sulfate, and sodium chloride were purchased from Sigma-Aldrich, Poole, UK. Luria Bertani media was purchased from Melford laboratories Ltd., Ipswich, UK. Isopropyl B-D-1-thiogalactopyranoside and aminoleuvelic acid were obtained from Molekula Ltd., Darlington, UK.
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6

Reagents for Gel Electrophoresis Protocols

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The materials used in this study were agar bacto (Oxoid), agarose (Sigma-Aldrich), ammonium persulfate (Bio Basic INC), aquades, glacial acetic acid, bis-acrylamide, Coomassie brilliant blue R-250, ethanol, glycerol, kanamycin Sulfate (Sigma-Aldrich), Unstained Protein MW Marker, L-rhamnosa (Sigma-Aldrich), sodium chloride (Brand), sodium dodesyl sulphate (Brand), tris (hydroxymethyl) aminomethane (Brand), TEMED, glycine, tryptone (1'st Base), urea (Brand), and yeast extract (1'st Base).
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7

Protein Purification and Characterization

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All chemicals and reagents used in this study were of the highest purity grade. LB medium, kanamycin sulfate, isopropyl-β-D-thiogalactopyranoside (IPTG), nickel-nitrilotriacetic acid resin (Ni-NTA), imidazole, 4-nitrophenyl-β-D-glucopyranoside (pNPG), 1-anilinonaphthalene-8-sulfonate (ANS), tannic acid (TAN, molecular weight of 1,701.2 g/mol) and Triton X-100 (approximate molecular weight of 625 g/mol) were purchased from Sigma–Aldrich.
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8

Staphylococcus epidermidis Cultivation Protocol

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Staphylococcus epidermidis RP62A was obtained from American Type Culture Collection (ATCC 35984), and S. epidermidis clinical isolates were collected from the Department of Laboratory Medicine, Affiliated Gulou Hospital, Medical College of Nanjing University. Staphylococcal strains were cultured in tryptic soy broth (TSB; Oxoid Ltd., Basingstoke, United Kingdom), and Escherichia coli strains DH5α and BL21(DE3) were cultured in Luria-Bertani (LB) broth (1% tryptone, 0.5% yeast extract, 1% NaCl). Kanamycin sulfate was obtained from Sigma Aldrich (St. Louis, MO, United States).
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9

Hesperetin and Hesperidin Purification Protocol

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Hesperetin (HST), kanamycin sulfate, chloramphenicol, D-sorbitol, β-mercaptoethanol (BME), isopropyl β-D-1-thiogalactopyranoside (IPTG), ethylenediamine tetraacetic acid (EDTA), dimethyl sulfoxide (DMSO), deuterated DMSO-d6, deuterium oxide (2H2O and D2O) ribonuclease A, Tris-HCl, NaCl, ZnSO4, (NH4)2SO4, K2HPO4, and KH2PO4 were purchased from Sigma-Aldrich (Saint Louis, MO, USA); 1,4-dithiothreitol (DTT) from InLab; and Amicon Ultra-15 centrifugal filter (MWCO: 3.0 kDa) from Millipore. Hesperidin (HSD) was produced, purified [40 ] and kindly provided by Prof. Dr. Ljubica Tasic from University of Campinas (UNICAMP), Brazil.
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10

Cytochrome c Reductase Enzyme Assay

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Dichlorophenolindophenol (DCPIP) and potassium ferricyanide were from Fluka (Buchs, Switzerland). L-Arginine, ampicillin, kanamycin sulfate, chloramphenicol, cytochrome c (horse heart), isopropyl β-D-1-thiogalactopyranoside (dioxane-free), thiamine, glucose 6-phosphate, glucose 6-phosphate dehydrogenase, NADP+ and NADPH were obtained from Sigma–Aldrich (St. Louis, MO, United States). Phenylmethanesulfonyl fluoride was purchased from Gerbu Biotechnik GmbH (Heidelberg, Germany). Bacto agar, Bacto peptone and Bacto tryptone were obtained from BD Biosciences (San Jose, CA, United States). Bacto yeast extract was obtained from Formedium (Norwich, England). A polyclonal antibody from rabbit serum raised against recombinant human CPR obtained from Genetex (Irvine, CA, United States) was used for immunodetection of the membrane-bound CPR, while the respective antibody used the in the case of the soluble form of the enzyme was obtained from Thermofisher Scientific (Waltham, MA, United States).
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