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Goat anti doublecortin

Manufactured by Santa Cruz Biotechnology
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Goat anti-doublecortin is a primary antibody used in research applications to detect and study the expression of the doublecortin protein. Doublecortin is a microtubule-associated protein that plays a crucial role in neuronal migration and development. This antibody can be utilized in various techniques, such as immunohistochemistry, immunocytochemistry, and Western blotting, to investigate the localization and expression of doublecortin in biological samples.

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18 protocols using goat anti doublecortin

1

Immunocytochemical Analysis of Neuronal Differentiation

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After 12 d of differentiation, NSCs were briefly rinsed in PBS and fixed in 4% paraformaldehyde (PFA) at 4 °C for 20 min. Cells were permeabilized in 0.3% Triton X-100 for 30 min and blocked for in 1% BSA/PBS for 1 h at RT. Incubation with primary antibody goat anti-Doublecortin (1:250, Santa Cruz, Sc-8066) diluted in 0.1% BSA/0.2% Triton X-100 was performed overnight at 4 °C. The secondary antibody Alexa Fluor antigoat-555 (1:1,000; Thermo Fisher Scientific) was incubated for 1 h at RT followed by DAPI staining (1:20,000) for 10 min. Coverslips were mounted on glass slides using FluorSave reagent (Merck Millipore). Images were acquired using a 63 oil immersion objective (numerical aperture 1.4) on a Zeiss confocal microscope. The number and length of neuronal processes were measured using the NeuronJ plugin of ImageJ (ImageScience).
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2

Quantifying pNF-κB p65 Colocalization in Hippocampus

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To assess pNF-κB p65 colocalization, free-floating hippocampal sections were processed similar to previously reported methods (Vetreno et al., 2013 (link); Vetreno and Crews, 2015 (link)). Briefly, sections collected from subjects sacrificed on P56 (24 h post-AIE) were washed in 0.1 M TBS, antigen retrieval performed by incubation in Citra solution (BioGenex]) for 1 h at 70°C, and blocked with normal horse serum (MP Biomedicals). Sections were incubated for 48 h at 4°C in a primary antibody cocktail of rabbit anti-pNF-κB p65 (Santa Cruz Biotechnology) with an antibody against immature neurons (goat anti-doublecortin [Santa Cruz Biotechnology]), microglia (goat anti-Iba-1 [Abcam; Cat. #ab5076]), or astrocytes (goat anti-GFAP [Abcam; Cat. #ab53554]). Sections were washed in TBS and incubated for 2 h at room temperature in the secondary antibody cocktail (Alexa Fluor 594 and Alexa Fluor 488; Invitrogen, Carlsbad, CA). Tissue was mounted onto slides and cover slipped using Prolong Gold Anti-Fade mounting media (Life Technologies, Grand Island, NY). Immunofluorescent images were obtained using a DS-RiZ scope (Nikon Inc., Melville, NY) and colocalization quantified using NIS Elements AR46 (Nikon Inc.).
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3

BrdU Immunohistochemistry of Adult Neurogenesis

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Mice were anesthetized and perfused by 4% PFA transcardially, and the dissected brains were postfixed with 4% PFA overnight. After immersion in 30% sucrose in PBS, 30-μm-thick coronal sections were cut on a cryostat microtome. For BrdU immunohistochemistry, sections were treated first with 2 M HCl at 37 °C for 15 min, and then blocked in 2% BSA (Sigma-Aldrich) in DPBS supplemented with 1% Triton-X 100 (Sigma-Aldrich) at 4 °C overnight. The sections were then incubated with primary antibodies at 4 °C overnight. The following antibodies were used: rat anti-BrdU (1:200; Serotec), goat anti-doublecortin (1:50; Santa Cruz), and mouse anti-NeuN (1:200; Millipore). Fluorophore-conjugated secondary antibodies were used at a dilution of 1:1000 and incubated with the sections for 1.5 h at RT. Secondary antibodies used were (all from Thermo Fisher Scientific) Alexa 594-conjugated donkey anti-rat, Alexa 488-conjugated donkey anti-goat, Alexa 488-conjugated donkey anti-rat, and Alexa 594-conjugated donkey anti-mouse. Cell nuclei were visualized by DAPI (Sigma-Aldrich).
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4

Immunohistochemical Staining of Zif268 and Doublecortin

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Free-floating sections were prewashed three times for 10 min with 0.1 M Tris buffer saline (TBS; Sigma-Aldrich, Oakville, ON, Canada). Sections were then incubated in a primary antibody solution containing 1:500 rabbit anti-zif268 (Santa Cruz Biotechnology, Dallas, TX, USA), 1:500 goat anti-doublecortin (Santa Cruz Biotechnology, Dallas, TX, USA) 0.3% Triton-X (Sigma-Aldrich) and 3% normal donkey serum (NDS; MilliporeSigma, Burlington, MA, USA) in 0.1 M TBS for 24 h at 4 °C. Sections were washed three times for 10 min in TBS and a further incubation of sections commenced in a secondary antibody solution containing 1:500 donkey anti-rabbit ALEXA 594 (Invitrogen, Burlington, ON, Canada), 1:500 donkey anti-goat ALEXA 488 (Invitrogen, Burlington, ON, Canada), 3% NDS and 0.3% Triton-X in 0.1 M TBS for 24 h at 4 °C. Following three final rinses with TBS, the sections were mounted onto microscope slides and cover-slipped with PVA DABCO.
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5

Mapping Cellular Tropism of AAV-PHP.eB

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To determine what kinds of cells in the brain AAV-PHP.eB could transduce, sections were stained with rabbit anti-NeuN (GB11138, Servicebio, Wuhan, China), rabbit anti-GFAP (ab7260, abcam, Cambridge, MA, USA), goat anti-Doublecortin (Santa Cruz Biotechnology, Dallas, Texas, USA), and goat anti-CD31 (AF3628, R&D Systems, Minneapolis, MN, USA).
The preparation of sections for immunofluorescent staining was as follows: sections were 1) rinsed in PBS at RT for 5 min; 2) blocked in 5% bovine serum albumin (BSA) in PBS at RT for 1 h; 3) incubated with primary Abs (diluted in 5% BSA) at RT overnight, including the rabbit anti-NeuN Ab (1:100), rabbit anti-Glial fibrillary acidic protein (GFAP) Ab (1:100), goat anti-Doublecortin (DCX) Ab (1:100), and goat anti-CD31 Ab (1:100); 4) washed in PBS, 10 min × 3 times; and, 5) incubated in secondary Abs (diluted in 5% BSA) at RT for 1 h. For primary Abs from rabbit, Alexa Fluor 488-labeled goat anti-rabbit IgG (1:100) were used. Alexa Fluor 488-labeled Donkey anti-goat IgG (1:100) was used for goat primary Ab; 6) washed in PBS, 10 min × 3 times; and, 7) coverslipped using anti-fade mounting medium with or without 10 µg/ml Hoechst dye.
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6

Cryosectioning and immunostaining of animal tissue

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Unused hemispheres from a subset of animals (n = 5) were sectioned coronally on a cryostat at 60 μm and mounted to gelatin-coated slides. Sections were immunostained with mouse anti-nestin (1:100; Millipore), chicken anti-glial fibrillary acidic protein (GFAP; 1:500; Chemicon), goat anti-doublecortin (1:250; Santa Cruz Biotechnology), mouse anti-calretinin (1:200; Millipore) or guinea pig anti-calbindin-d-28K (1:200; Sigma-Aldrich). Alexa Fluor 405 goat anti-mouse, 488 goat anti-chicken, 594 goat anti-mouse, 647 donkey anti-goat or Alexa Fluor 647 goat anti-guinea pig secondary antibodies were used (Invitrogen). Tissue was dehydrated in alcohol series and cleared in xylenes, and coverslips were secured with mounting media (Krystalon, Harleco).
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7

Multimodal Immunostaining of Brain Tissue

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Immunohistochemistry was performed as previously described [44] (link). Briefly, injected animals were perfused at different time points with 4% paraformaldehyde (PFA). The brains were removed and immersed in 4% PFA overnight at 4°C and then equilibrated in 30% sucrose. Entire brains were processed in sagittal 40 microns microtome sections. Sections which were positive with GFP-labelled cells were blocked with 5% donkey serum, permeabilized with 0.25% Triton X in TBS for 30 minutes before application of primary antibodies of rabbit anti-GFAP (Dako, Glostrup, Denmark), anti-PDGFRα (Millipore), goat anti-doublecortin (Santa Cruz, CA, USA), mouse anti-human nestin (Millipore) and anti-human nuclei (Millipore) at dilutions of 1∶100 to 1∶500 for overnight incubation at 4°C. Incubations with secondary antibody (1∶500) of 647 donkey anti-rabbit or 647 donkey anti-goat with 555 donkey anti-mouse for one hour at room temperature were performed, followed by a five minute staining with DAPI (Millipore), before sections were mounted on slides with mounting medium. The staining was viewed using Zeiss LSM 710 confocal system (Carl Zeiss Pte Ltd, Singapore) at 63X magnification.
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8

Immunostaining for Neurogenesis in Rat Brains

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Upon completion of behavioral tests, rats were perfused with 4% paraformaldehyde, and brains were postfixed in 4% paraformaldehyde, cryoprotected with glycerol, and coronally sectioned on a freezing microtome (40 μm). A few sections from each brain were immunostained with goat anti-doublecortin (1:200; Santa Cruz) and donkey anti-goat Alexa 488 secondary antibody (1:200; Invitrogen), counterstained with bisbenzimide (1:1000), and coverslipped under PermaFluor. At least 2 sections per brain were examined to qualitatively determine the presence or absence of doublecortin-labeled neurons in the subgranular zone of the dentate gyrus. Brains from TK rats were essentially devoid of DCX+ cells, while those from WT rats had significant numbers of DCX+ cells, as expected [22 (link)]. Deviation from this expected pattern, indicating misidentification of genotype or incomplete ablation, was not observed in any rats.
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9

Doublecortin immunohistochemistry protocol

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Sections were first washed in PBS 5 × 10 min and then treated with 0.3% hydrogen peroxide in dH20 for 30 min before transferring into the primary antibody solution: 1:1000, goat anti-doublecortin (Santa Cruz Biotechnology, Santa Cruz, CA, USA) with 0.04% Triton-X in PBS and 3% normal rabbit serum. Twenty-four hours later, sections were washed 5 × 10 min and transferred to the secondary antibody solution: 1:500, rabbit anti-goat (Vector Laboratories, Burlington, ON, Canada) in PBS for 24 h. Then sections were washed 5 × 10 min and incubated in ABC complex (ABC Elite Kit; 1:1000; Vector Laboratories) for 4 h. Sections were then washed in 0.175 M sodium acetate buffer 2 × 10 min. Finally, sections were developed using diaminobenzidene in the presence of nickel (DAB Peroxidase Substrate Kit, Vector), mounted on slides, dried overnight, dehydrated, cleared in xylene and cover slipped with Permount (Fisher). All steps took place at room temperature with the exceptions of the primary and secondary antibody incubations, which took place at 4° C.
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10

Immunofluorescence Staining of Cell Samples

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Samples were fixed with 4% PFA for 10 min at room temperature, subsequently washed with PBS, permeabilized, and blocked in blocking solution (with 2% BSA, 0.1% Triton-X100 in PBS) for 2 h. Primary antibodies were added at 1:100 dilution [rabbit polyclonal anti-MyoVIIa (Proteus); mouse monoclonal anti-Sox2 (Millipore); rabbit polyclonal anti-Sox2 (Invitrogen); rat anti-E-cadherin (Abcam); mouse anti-GATA3 (Thermo Fisher Scientific); mouse anti-Islet 1 (DSHB, deposited by Jessell T.M.); goat anti-Doublecortin (Santa Cruz Biotechnology); rabbit anti-Pax2 (Thermo Fisher Scientific); rabbit anti-Pax8 (Abcam); mouse anti-Nestin (BD Transduction Laboratories); mouse anti-βIII-Tubulin (R&D); rabbit anti-Peripherin (Millipore); and mouse monoclonal anti-Brn3a (Millipore)], and incubated in blocking solution overnight at 4°C. Samples were then washed three times with PBS, followed by the addition of Alexa Fluor conjugated secondary antibodies (Invitrogen) at 1:500 dilution in blocking buffer for 2 days at room temperature. The images were acquired with a confocal microscope (Zeiss LSM 700) using 10× and 20× air objectives.
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