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5 protocols using ab150440

1

Multiplex Immunofluorescence Profiling of Tissue Samples

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Tissue samples were fixed in formalin, embedded in paraffin, and sectioned. These specimens were incubated with the following antibodies: anti-CD3 (A045229–2; DAKO), anti-CD4 (ab133616; Abcam), anti-Pan-CK (ab27988; Abcam), anti-CD31 (3528; Cell Signaling Technology), anti-SLAMF7 (HPA055945; Sigma-Aldrich), anti-CX3CR1 (ab8021; Abcam), anti-T-bet (ab150440; Abcam), anti-GATA3 (MA1028; Invitrogen), anti-Ror gamma (ab212496; Abcam), anti-CXCR5 (clone: MAB190; R&D Systems), anti-FoxP3 (clone: 98377; Cell Signaling Technology), anti-CD8 (ab85792; Abcam), anti-PD1 (B13300; Lifespan Bioscience), anti-GZMB (ab4095; Abcam), anti-HLA-DR (ab20181; Abcam), anti-TGF-β (ab27969; Abcam) and anti-cleaved caspase-3 (9664; Cell Signaling Technology) followed by incubation with a secondary antibody using an OpalTM Multiplex Kit (Perkin Elmer). The samples were mounted with ProLongTM Diamond Antifade mountant containing DAPI (Invitrogen).
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2

Immunophenotyping of TIME in TNBC

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The FFPE tissue sections were deparaffinized to water using graded ethanol-dimethylbenzene, employed in ethylenediaminetetraacetic acid (EDTA) buffer (pH 8.0, ZHHC, PI001) for 15 min to recover the antigen, incubated in Triton X-100 (ZHHC, PI024) for 5 min to implement a permeable membrane, and sealed with bovine serum albumin (BSA). To label the TH1, TH2, and Treg subsets of the TIME in TNBC, sections were incubated overnight at 4 °C with primary antibodies against T-bet (Abcam, ab150440, 1:30), GATA-3 (Abcam, ab199428, 1:30), and CD25 (Abcam, ab231441, 1:50) and CD4 (Proteintech, 67786-1-Ig, 1:200). The sections were washed with phosphate-buffered saline (PBS) and incubated with the secondary antibody (Proteintech, SA00003-1 and SA00009-2, 1:50) at room temperature for 60 min. The nuclei were stained with 4,6-diamidino-2-phenylindole (DAPI) (ZHHC, CD110) for 3 min. The stained cells were observed, and images were acquired by a confocal laser scanning microscope (Leica Company) in at least 10 fields per section. For Masson’s trichrome staining, the deparaffinized sections were analyzed with a Masson’s trichrome stain kit (Solarbio, G1340) and were observed, and images were acquired by a Leica scanning optical microscope after dehydration, clearing, and mounting.
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3

Immunostaining of Kidney Allograft Biopsies

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FFPE blocks of kidney allograft biopsies from transplant patients were cut (4 μm), then underwent sequential rehydration and antigen retrieval in citrate pH 6 solution buffer. The sections were incubated overnight with anti-CD20 (mouse, M0755, Dako), anti-CD27 (armenian hamster, ab219779, Abcam), and anti–T-bet (rabbit, ab150440, Abcam) antibodies. After washing, the sections were incubated 30 minutes with secondary anti-mouse (AF488, Dako), anti–armenian hamster (AF568, Abcam), and anti-rabbit (Cy5, Abcam) antibodies. Nuclei were counterstained with DAPI, and slides were mounted using ProLong medium (Thermo Fisher Scientific). Sections were also stained with hematoxylin and eosin for histological evaluation. Each experiment was performed concomitantly with a positive control (section from kidney allograft removed due to incurable ABMR or human spleen) and a negative control (section from kidney allograft incubated with secondary antibody without primary antibody). Images were acquired on a Zeiss Axio Scan instrument. We used the number of CD20+CD27+T-bet+ (triple-positive) cells per 10 consecutive high-power fields for cell quantification.
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4

Immunohistochemical Analysis of ARPC Skin

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Immunohistochemistry was performed to detect lymphocyte subsets and Th2-related molecules in skin samples of 22 patients with ARPC, 5 patients with atopic dermatitis (AD), and 5 healthy controls (HCs).
Formalin-fixed, paraffin-embedded 3-µm tissue sections were prepared for immunohistochemical analysis. The sections were incubated with the following primary antibodies: anti-CD3 (DF6594; Affinity Biosciences, Cincinnati, OH, USA), anti-CD20 (DF13319; Affinity Biosciences), anti-T-bet (ab150440; Abcam, Cambridge, UK), anti-GATA3 (ab199428; Abcam), anti-IL-4 (66142-1-Ig; Proteintech, Chicago, IL, USA), and anti-IL-13 (CSB-PA011590LA01HU; Cusabio, Wuhan, China). A mouse and rabbit antibody kit (KIT9922; MXB, Fuzhou, China) was used for the detection of primary antibodies.
Stained sections were scanned using the Pannoramic Scan 150 device (3DHISTECH Ltd., Budapest, Hungary), to produce digital images (40× and 200× magnification) that were imported into the CaseViewer 2.4 (3DHISTECH Ltd.) image management system. ImageJ software (NIH, Bethesda, MD, USA) was used to analyze the images. The levels of IL-4, IL-13, and T- and B-cell markers in the dermis are expressed in terms of cellular density.
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5

Immunofluorescence Staining of Breast Cancer Tissue

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The paraffin embedded sections from breast cancer tissue samples were deparaffinized in xylene and dehydrated in gradient concentration of ethanol. Antigen repair of tissue slides was subsequently performed in ethylene diamine tetraacetic acid (EDTA) buffer (pH 8.0) for 15 min in a microwave oven, followed by permeabilized with 0.5% TritonX-100 for 10 min, and blocked with 5% bovine serum albumin (BSA). Then tissue slides were incubated overnight with specific primary antibodies, followed by secondary antibodies of Cy3-conjugated goat anti-rabbit IgG and FITC-conjugated goat anti-mouse IgG(Proteintech). Primary antibodies used for IF staining included CD4 (Proteintech, 67786, 1:200), T-bet (Abcam, ab150440, 1:30), CCR4 (Abcam, ab59550, 1:50), CD25 (Abcam, ab231441, 1:50) and IL-17A (Abcam, ab79056, 1:100). DAPI solution (Bioworld, 1:1000) was next used for nuclear staining. Image capture was performed by a Leica confocal microscope at 40× magnification. For the quantitative analysis of each Th cells, we randomly selected 3 fields from the slices of each sample for statistical analysis.
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