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Prolong gold and dapi

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ProLong Gold is a mounting medium for fluorescence microscopy that preserves the fluorescence of labeled specimens. DAPI is a fluorescent stain that binds to DNA and is commonly used for nuclear counterstaining in fluorescence applications.

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11 protocols using prolong gold and dapi

1

Immunofluorescent Staining of LMP1 and p-STAT3

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Cells were fixed on slides by immersion in 4% paraformaldehyde for 10 min, followed by three washes in PBS and were incubated with mouse monoclonal anti-LMP1 and rabbit polyclonal anti-phospho-STAT3 (Tyr705) antibodies at room temperature. Then, the slides were treated at room temperature with a Cy5-conjugated AffiniPure donkey anti-mouse antibody (No.715-175-151, Jackson ImmunoResearch Laboratories, Inc., West Grove, PA) to label the anti-LMP1 antibody and a PE-conjugated goat anti-rabbit antibody (No. 4030-09; Southern Biotech, Birmingham, AL) to label the anti-phospho-STAT3 antibody. The nuclei were counterstained with ProLong Gold and DAPI (Invitrogen, Carlsbad, CA).
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2

Immunostaining of EGFRvIII-expressing GBM Xenograft

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An EGFRvIII-expressing human GBM (GBM39) was propagated as a xenograft40 (link) and kindly provided by C. David James (Department of Neurological Surgery, University of California San Francisco). Harvested tumor tissue was formalin-fixed, paraffin-embedded, and cut into 4 µm sections for mounting on positively-charged slides. Antigen retrieval was performed using protease 2 (Ventana). Sections were immunostained with primary antibodies targeting phospho-Tyr-845 (1:150; Abcam) and human uPAR (1:75; Dako) for 1 h at 37°C using the Ventana Discovery Ultra Platform. Q-dot-linked fluorescent secondary antibodies (1:150; Invitrogen) were added for 1 h. The slides were rinsed and cover-slipped with Prolong Gold and DAPI (Invitrogen). Slides were visualized on a Zeiss Axio Imager2 using Cambridge Research Instruments Nuance Multispectral Imaging System software to capture images and visualize individual fluorophore spectra free from auto-fluorescence noise. In control experiments, phospho-epitope labeling was validated using protein phosphatase treatment, which eliminated signal.
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3

Immunostaining of Embryos

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Each stage of embryos without zona pellucida was fixed in 4% paraformaldehyde for 15 min at room temperature. Fixed samples were permeabilized using 1% Triton X-100 for 1 hour at room temperature and washed three times with phosphate-buffered saline (PBS). The embryos were blocked using 10% goat serum or donkey serum in PBS for 1 hour at room temperature. Samples were stained with anti-GFP (5 μg/mL), RFP (1 μg/mL), and anti-OCT4 (1 μg/mL) or anti-SOX2 (2.5 μg/mL) in PBS containing 10% goat serum at 4°C overnight (Table S1). After washing 3 times in washing solution (PBS with 0.2% Tween-20 and 1% BSA for 10 min), embryos were incubated with goat anti-mouse Alexa 647 (Invitrogen, Carlsbad, California, USA), goat anti-chicken Alexa488 (Invitrogen), and goat anti-rabbit Alexa555 (Invitrogen) in PBS with 10% goat serum or donkey serum at RT for 1 hour. All samples were washed 3 times with washing solution after secondary antibody treatment. Immunostained embryos were mounted on a glass slide with Prolong Gold and DAPI (Invitrogen) and cured for more than 24 hours. We described the list of antibodies in Table S1. Images of stained cells were captured using a confocal microscope and processed by the ImageJ program.
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4

Immunohistochemical Analysis of Mouse Thyroid

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Mouse thyroids were quickly dissected and immersion-fixed in 10% formalin, paraffin-embedded, sectioned, and stained with hematoxylin and eosin (Vector Laboratories). For immunofluorescence, thyroid sections (6 μm) were deparaffinized in Citrisolv, then rehydrated using a graded ethanol series, followed by antigen retrieval in citrate buffer, blocking in 1.5% goat serum, incubation with primary antibodies (overnight, 4°C) and Alexa Fluor–conjugated secondary antibodies (Invitrogen A11073, A11001, A21422, A21428, A21245; Jackson ImmunoResearch 712-606-153; 1 hour, room temperature), counterstaining with ProLong Gold and DAPI (Invitrogen), and imaging with Nikon A1 confocal microscope or Leica STELLARIS 8 FALCON confocal microscope. Quantification of CD45+ cells in the proportion of total cells was performed using AIVIA Artificial Intelligence-guided Software. Immunohistochemistry of Ki67 used VECTASTAIN-ABC (Vector Laboratories) with 40× objective image capture (Olympus EX51 Microscope). Quantitation of Ki67-positive nuclei as a fraction of total thyroid nuclei per field, or Mac2-immunostained cells as a fraction of total thyroid nuclei per field, was performed using Imaris software (version 7.7.2).
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5

Thyroid Histological Analysis in Mice and Rats

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Thyroids from mice and rats were dissected, immersion fixed with 10% formalin, paraffin embedded, sectioned, and stained with hematoxylin–eosin (Vector). For immunofluorescence, thyroid sections (6 μm) were deparaffinized in CitriSolv, followed by antigen retrieval in citrate buffer (12.3 mM, pH 6), and blocked in 1.5% normal goat serum for 30 min at room temperature before incubation with primary antibodies overnight at 4 °C. After washing, the sections were then incubated with Alexa Fluor–conjugated secondary antibodies (Thermo Fisher Scientific) for 1 h at room temperature. Sections were counterstained with Prolong-Gold and DAPI (Invitrogen) and imaged with a Nikon A1 confocal microscope. For immunohistochemistry, anti-Ki67 staining was performed as previously described (21 ). Images were obtained in a Leica DMI-3000B microscope (40× objective). Analysis and quantification (Ki67-positive nuclei as a proportion of total nuclei) were performed by observers blinded to the genotypes and groups.
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6

Immunostaining of EGFRvIII-expressing GBM Xenograft

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An EGFRvIII-expressing human GBM (GBM39) was propagated as a xenograft40 (link) and kindly provided by C. David James (Department of Neurological Surgery, University of California San Francisco). Harvested tumor tissue was formalin-fixed, paraffin-embedded, and cut into 4 µm sections for mounting on positively-charged slides. Antigen retrieval was performed using protease 2 (Ventana). Sections were immunostained with primary antibodies targeting phospho-Tyr-845 (1:150; Abcam) and human uPAR (1:75; Dako) for 1 h at 37°C using the Ventana Discovery Ultra Platform. Q-dot-linked fluorescent secondary antibodies (1:150; Invitrogen) were added for 1 h. The slides were rinsed and cover-slipped with Prolong Gold and DAPI (Invitrogen). Slides were visualized on a Zeiss Axio Imager2 using Cambridge Research Instruments Nuance Multispectral Imaging System software to capture images and visualize individual fluorophore spectra free from auto-fluorescence noise. In control experiments, phospho-epitope labeling was validated using protein phosphatase treatment, which eliminated signal.
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7

Immunocytochemistry for Apoptosis and β-Catenin

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Immunocytochemistry for CC3 and β‐catenin was performed to analyse cell death after 24‐hr stimulation with Wnt ± H2O2 or to analyse β‐catenin localization after 30 min. VSMCs were fixed with 3% paraformaldehyde/PBS and permeabilized with 0.1%–0.2% Triton X‐100/PBS. After blocking with 20% goat serum/PBS, 1 µg/ml CC3 antibody (AF835; R&D Systems) in 1% BSA/PBS or 2.5 µg/ml β‐catenin antibody (610154; BD Transduction Laboratories, Oxford, UK) in PBS was added overnight at 4°C. Bound antibodies were detected with biotinylated goat anti‐rabbit IgG (B7389; Sigma‐Aldrich) or biotinylated goat anti‐mouse IgG (BA9200; Vector Laboratories, Peterborough, UK) and then DyLight‐488 Streptavidin (SA‐5488‐1; Vector Laboratories) diluted 1:200 in PBS. Coverslips were mounted in ProLong Gold and DAPI (P36931; Invitrogen, Paisley, UK).
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8

Immunofluorescence Labeling of NF-κB Subunits

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Cells were fixed on slides via immersion in 4% paraformaldehyde for 10 min, followed by 3 washes in PBS and incubation with mouse monoclonal anti-LMP1, p52, p50, RelA, or RelB antibodies at room temperature. Next, slides were treated at room temperature with a Cy5-conjugated Affinipure donkey anti-mouse antibody (Jackson ImmunoResearch Laboratories, Inc., West Grove, PA, USA) to label anti-p52 and anti-RelA antibodies or a PE-conjugated goat anti-rabbit antibody (Southern Biotech, Birmingham, AL, USA) to label anti-p50 and anti-RelB antibodies. Nuclei were counterstained with ProLong Gold and DAPI (Invitrogen, Carlsbad, CA, USA).
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9

Immunohistochemical Analysis of Thyroid Tissue

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Thyroid glands from mice and rats were immersion-fixed with 10% formalin and processed for paraffin embedding, sectioning, and H&E staining. For immunofluorescence, 6 μm sections were deparaffinized in Citrisolv and an ethanol series, then heated in citrate buffer (12.3 mM, pH 6) for antigen retrieval, and blocked in 1.5% normal goat serum for 30 minutes at room temperature. Primary antibody incubation was performed overnight at 4°C, followed by incubation of Alexa Fluor–conjugated secondary antibodies (Thermo Fisher). After washing, sections were counterstained and mounted with Prolong-Gold and DAPI (Invitrogen). Images were captured in a Nikon A1 confocal microscope. For anti-Ki67 immunohistochemistry, the VECTASTAIN ABC Kit (Vector) was used. After antigen retrieval, sections were treated with 3% H2O2, blocked in 1.5% normal goat serum for 20 minutes at room temperature, and incubated with anti-Ki67 antibody for 1 hour at room temperature and biotinylated secondary antibody for 30 minutes, followed by incubation with avidin-HRP. Staining was visualized by DAB reaction. Sections were counterstained with hematoxylin, dehydrated in a graded series of ethanol, and mounted with Permount. Images were obtained with a Leica DMI-3000B microscope.
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10

Visualizing CD137 Expression in EBV Cells

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The expression of CD137 protein on EBV-infected cells was examined by immune-fluorescent staining. Cells were fixed on slides by immersing in 4% paraformaldehyde for 10 min, followed by washing three times in PBS and incubation with mouse monoclonal anti-CD137, goat polyclonal anti-EBNA1) antibodies (Abcam, Cambridge, MA, USA), Cy5-conjugated Affinipure donkey anti-mouse antibody, and FITC-conjugated donkey anti-goat antibody (Jackson ImmunoResearch Laboratories, Inc. PA, USA). Nuclei were counterstained with ProLong Gold and DAPI (Invitrogen, Carlsbad, CA, USA), and the cells were analyzed by confocal microscopy (Fluoview FV10i, Olympus).
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