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32 protocols using coolpix

1

Wound Repair Assay for Alveolar Cells

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Wound repair assay was performed as reported previously [18 (link)]: human alveolar epithelial-like cells A549 (American Type Culture Collection [ACCT]; Rockville, MD, United States of America) were cultured to confluence in six-well plates in RPMI supplemented with 10% FCS. The cell layer was mechanically wounded using a pipette tip, and CM obtained from mesenchymal stem cells with and without different concentrations of HGF-neutralizing antibodies (0.1, 0.4, 0.8 ng/ml) was added to the wounded cells. Images of the wound surface were captured at time 0 and after 24 hours using a microscope (Leitz Diavert, Wetzlar, Germany) connected to a digital camera (Nikon Coolpix). Image J software (NIH, USA) was applied to analyze the wound surface and wound repair was expressed as percentage of lung epithelial wound closure after 24 hours.
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2

Pramlintide Effect on Endothelial Tube Formation

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For evaluation of the effect of pramlintide on tube formation, the Geltrex™ reduced growth factor basement membrane matrix was used. Briefly, the ice-cold 24-well plates were coated with Geltrex™ (10 ng/mL) and incubated at 37 °C for 30 min. HUVECs were plated (1.2 × 105/well) in the absence or presence of the pramlintide (1 and 10 μg/mL) or VEGF (2 ng/mL) on the polymerized Geltrex™ surface layer in DMEM. After 24 h incubation at 37 °C / 5% CO2, the cells were washed with Hanks balanced salt solution and stained with calcein acetoxymethyl dye. Photographs of each well were taken with a Nikon Coolpix camera attached to an inverted fluorescent microscope. The average tubules length, size and the mean number of junctions were measured in 5 high power fields of each well using AngioQuant software (MATLAB, Inc. Tampere, Finland) (17 (link)).
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3

Germination Scoring and Phenotypic Analysis

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Germination was scored as complete emergence of the radicle as described (Kim et al., 2019 (link)). Phenotypic responses on untreated (control) and experimental hormone plates were determined by comparison of mutants to Columbia WT on a Zeiss Stereo Discovery V.8 microscope at 1× using Axiovision with images recorded, and entire plates were photographed on day 4 after stratification using Nikon Coolpix on a white light box or black background. At least three sets of 30 seeds were scored for germination on phytatrays at 0 to 72 h every 4 h, post-stratification.
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4

Quantifying Root Gravitropism and Elongation

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For each experiment, 5-d-old uniformly grown seedlings were transferred to treatment mediums and positions of their root tips were marked at the back sides of plates. Digital images of seedlings were captured using Nikon Coolpix digital camera after 3 d. For gravitropic-bending kinetics, pictures were taken at different time intervals after gravistimulation. The root deviation was measured by calculating the angle of root from the vertical axis using ImageJ (http://rsb.info.nih.gov/ij/). Root elongation was measured using ImageJ. Root coiling and waving response was studied as described previously (Buer et al., 2003 (link); Chen et al., 2009 (link)). Digital images were captured and processed using ImageJ. For biomass, 5-d-old uniformly grown seedlings were transferred to treatment medium for 10 d, root and shoot tissues were harvested, and fresh weight was measured. The area spanned by roots was measured using ImageJ.
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5

Imaging wing discs and adult wings

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Wing imaginal discs and brains were imaged on a Zeiss LSM 780 laser-scanning confocal microscope using the sequential scanning mode and a 40x/1.3NA oil objective. Adult wings were mounted in 50% glycerol / 50% ethanol and imaged on a Nikon Eclipse TS100 microscope with a 5x objective and a Nikon Coolpix digital camera.
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6

Quantifying Skin Pathology via Imaging

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Images were captured weekly with a digital camera (Coolpix, Nikon Inc., Tokyo, Japan) to record clinical symptoms on the ear and dorsal skin. Ear thickness was measured using a dial gauge (Olympus, Tokyo, Japan) on day 30. Ear and skin epidermal thickness were measured using Masson’s stain and the aid of a microscope with Image-Pro Plus software (version 6.0 for Windows).
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7

Multispectral Land Cover Dataset

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The abovementioned five different types of land cover plots have a 43560-square-foot area (1 acre) for each type. Digital photographs of bare land, desert rangeland, fertile cultivated land, green pasture, and Sutlej river land are taken by a digital Nikon camera, model COOLPIX having a 10.1-megapixel resolution, which are shown in Figure 2. The 15 colored images of each type of land cover with the dimensions of 4288 × 3216 pixels and 24-bit depth of jpg format are acquired. To increase the dataset, four nonoverlapping regions of interests (ROIs) of size (512 × 512) on each image are developed; in this way total (75 × 4 = 300) subimages data are arranged for the analysis. The photographic data are acquired at the altitude of 5 feet from the ground surface of the same specific location where radiometric data are acquired.
To keep away from the sun shadow effect, the data are acquired at noontime (1.00 pm to 3.00 pm) under a clear sky. At the time of data acquisition, the light intensity is measured by digital Luxmeter MS 6610, MATECH, and described in Table 1.
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8

Non-Destructive Canopy Estimation Protocol

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Non‐destructive estimates of canopy area were made using photographs of all plants at all garden sites during July in 2010 and 2014. Images were taken using a Nikon Coolpix camera from directly above each plant with white background. A ruler was placed next to the plant to set image scale. Images were imported into ImageJ v1.8.0 and converted to black and white to delineate plant from background. Canopy area was determined by pixel counts (Image J, Rasband 1997–2008, online resource‐https://imagej.nih.gov/ij/) after selecting outline of plant and using a reference scale to provide area in cm2. Measurement error was approximately 2% based on repeated measurements of the same ImageJ photographs. On a separate set of non‐study plants, we correlated ImageJ canopy area with actual leaf area measurements (the gold standard for leaf area) from plants using a leaf scanner (Figure S2, r = .95 p < .0001).
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9

Wound Closure Imaging and Analysis

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Wounds were imaged daily to follow closure of the wounds. Each wound site was imaged using high-resolution camera (Nikon Coolpix). Closure fraction was determined as described previously1 (link). Briefly, closure was determined by comparing the pixel area of the wound to the pixel area within the 10 mm center hole of the red rubber splint. Closure fractions were normalized to Day 0 for each mouse/scaffold sample. Investigators were blinded to treatment group identity during analysis.
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10

Wound Closure Imaging and Analysis

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Wounds were imaged daily to follow closure of the wounds. Each wound site was imaged using high-resolution camera (Nikon Coolpix). Closure fraction was determined as described previously1 (link). Briefly, closure was determined by comparing the pixel area of the wound to the pixel area within the 10 mm center hole of the red rubber splint. Closure fractions were normalized to Day 0 for each mouse/scaffold sample. Investigators were blinded to treatment group identity during analysis.
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