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14 protocols using ab195055

1

Analyzing HOXC10 and JAK/STAT Signaling

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The protein was extracted using RIPA buffer (Beyotime), separated by 10% SDS-PAGE, and then transferred to PVDF membranes. The membrane was cultured with primary antibodies against HOXC10, Interleukin-6 (IL-6, ab233706, Abcam), Janus kinase 2 (JAK2, ab108596, Abcam), phospho-JAK2 (p-JAK2, ab195055, Abcam), Signal transducer and activator of transcription 3 (STAT3, ab68153, Abcam), phospho-STAT3 (p-STAT3, ab267373, Abcam), and GAPDH (ab8245, Abcam) at 4°C overnight, followed by incubation with secondary antibody for 1 h at 37°C. The enhanced chemiluminescent (ECL) reagent (Beyotime) was employed to visualize protein bands, and quantification was performed using IMAGE J software (National Institutes of Health) [13 ].
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2

Quantification of Intracellular Signaling Proteins

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Tissues or cardiomyocytes were sonicated in RIPA lysis buffer containing 1% NonidetP-40, 0.1% SDS, protease inhibitor, while adding phosphatase inhibitors cocktail (Bimake, Houston, USA), and then homogenized. The nuclear and cytosolic protein were extracted by commercially available kit (Beyotime Biotechnology, Shanghai, China). Briefly, the cells expanded sufficiently under low osmotic pressure, then the cell membrane ruptured, releasing cytoplasmic proteins. Nucleus precipitation could be centrifuged to obtain after then. Finally, the nuclear protein was extracted by high salt nucleoprotein extraction reagent. Equal quantities of tissues or cardiomyocytes protein lysates were subjected to SDS-PAGE (Bio-Rad), and transferred onto PVDF membrane. Blocking was made at room temperature with 5% nonfat milk powder prepared in Tris-buffered saline containing 0.1% Tween 20. Then, membranes were incubated overnight at 4 °C with corresponding antibodies, and followed by incubation with appropriate secondary HRP-conjugated antibodies. Antibodies against p38 (#8690), P-p38 (#4511), NFκB-p65 (#8242), ERK (#4695), P-ERK (#4370), P-Stat3 (#9145), Stat3 (#4904) and GAPDH (#2118) were obtained from Cell signaling Technology (Danvers, USA). Antibodies against FNDC5 (ab174833), P-JAK2 (ab195055), JAK2 (ab108596), Nox2 (ab129068), Nox4 (ab154244) were obtained from Abcam (Cambridge, UK).
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3

Quantitative Western Blotting of Glioma Proteins

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Western blotting was performed as previously described [26 (link)]. In brief, a total cell protein extraction kit (KeyGen Biotechnology, Nanjing, China) was used to isolate the total proteins of glioma tissues or GSCs. Then, protein lysates were prepared, and the total protein for each sample was transferred onto the polyvinylidene difluoride (PVDF) membranes after SDS-polyacrylamide gel electrophoresis (SDS-PAGE), and blocked 2 h at room temperature with 2% bovine serum albumin (KeyGen Biotechnology). Subsequently, all these membranes were incubated overnight at 4 °C with the primary antibodies as below: HOXB5 (1:1000; #ab109375, Abcam), IL6 (1:1000; #ab233551, Abcam), p-JAK2 (1:500; #WL02997, Wanleibio, Shenyang, China), JAK2 (1:500; #ab195055, Abcam), p-STAT3 (1:1000; #WLP2412, Wanleibio), STAT3 (1:2000; #ab76315, Abcam), SRSF1 (1:500; #12929-2-AP, Proteintech, Rosemont, IL, USA) and β-actin (1:2000; #20536-1-AP, Proteintech). Following 2 h’ secondary antibodies (1:1000; #SA00001-2, Proteintech) incubation, all the bands were detected by a chemiluminescence ECL kit (Beyotime Biotechnology, Beijing, China) and quantified by Image J software (National Institutes of Health, Bethesda, MD, USA). The relative expression was calculated based on the internal control β-actin.
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4

Protein Expression Analysis in HRMECs

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HRMECs were collected and extracted by RIPA lysis buffer (89901, Thermo Scientific, U.S.A.) with protease inhibitor cocktail (Merck KGaA, Darmstadt, Germany). A BCA™ Protein Assay Kit (Pierce, Appleton, WI, U.S.A.) was used to evaluate the protein levels. Equal amounts of proteins were loaded on 10% SDS-PAGE gels (Thermo Scientific), transferred to polyvinylidene fluoride (PVDF) membranes (Millipore, Bedford, Massachusetts, U.S.A.) and blocked with 5% non-fat milk at room temperature for 1 h. Afterwards, membranes were subjected to immunoblotting with primary antibodies (all purchased from Abcam, Cambridge, MA, U.S.A.) against SOCS6 (ab197335, 1/500), p-JAK2 (ab195055, 1/500) JAK2 (ab39636, 1/1000), p-STAT3 (ab32143, 1/1000) STAT3 (ab119352, 1/5000), PCNA (ab92552, 1/1000), Cyclin D1 (ab16663, 1/200), Cyclin E1 (ab33911, 1/1000), cleaved caspase-3 (ab32042, 1/500), Bcl-2 (ab59348, 1/500) and Bax (ab216494, 1/100) and incubated at 4°C overnight. Subsequently, the blots were washed with PBST, and the membranes were incubated with secondary peroxidase-linked goat anti-rabbit IgG H&L (1:5000, Santa Cruz, California, U.S.A.) at room temperature for 2 h. Signals were visualized by the ECL (Amersham Biosciences, Piscataway, NJ) method after washing, while optical densities of the bands were measured using ImageJ software (Bio-Rad).
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5

Western Blot Analysis of Protein Expression

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Western blot was used to detect the protein expression in tissues and cell lysates as previously described.20 (link),21 (link) The primary antibody were incubated in 4°C overnight and the primary antibody were anti-IL-12 p40 antibody (1:1000, ab77373, abcam, UK), anti-JAK2 antibody (1:500, ab39636, abcam, UK), anti-JAK2 (phospho Y1007) antibody (1:500, ab195055, abcam, UK), anti-STAT4 antibody (1:2000, ab235946, abcam, UK) and anti-STAT4 (phospho Y693) antibody (1:500, ab28815, abcam, UK). The second antibody was incubated for 1 hr at room temperature. BeyoECL Plus kit (P0018S, Beyotime, Shanghai, China) was used to chromogenic and densitometry protein bands with Beckman Coulter Immunoassay System (UniCel DxI 800, Beckman, CA, USA).
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6

Western blot analysis of JAK2/STAT3 and Nrf2/Keap1

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Total protein extracts were prepared from the harvested testes using radio-immunoprecipitation assay (RIPA) buffer (Sigma-Aldrich, St. Louis, MO, USA) and stored at −80 °C. The primary antibodies for JAK2 (ab108596) and ph-JAK2 (ab195055) were purchased from abcam (Cambridge, UK). The primary antibodies for STAT3 (mAb#4904) and ph-STAT3 (mAb#9145) were purchased from Cell Signaling Technology (Danvers, MA, USA). The primary antibodies for Nrf2 (MBS9600480) and Keap1 (MBS2536215) were purchased from MyBioSource.com (San Diego, CA, USA). Protein extracts (150 μg) were resolved through 10% SDS-PAGE. Separated proteins were transferred to a PVDF membrane followed by blocking and incubation with primary antibody for each target protein individually. The primary antibody dilutions are as follows: JAK2 (1:1000), ph-JAK2 (1:500), STAT3 (1:1000), ph-STAT3 (1:500), Nrf2 (1:1000), and Keap1 (1:1000). The PVDF membrane was then treated with a horseradish peroxidase/HRP-conjugated secondary antibody. Protein band signal amplification was performed using the electrochemiluminescence method (ECL) (Thermo Fisher Scientific, Waltham, MA, USA) and visualized by the ChemiDoc™ MP Imaging System (BioRad, Hercules, CA, USA). Band intensity quantification was measured using the Image Lab software v. 4.1 (BioRad, Hercules, CA, USA).
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7

Western Blot Analysis of JAK2/STAT3 Signaling

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Total protein of cells was extracted using high-efficiency RIPA lysis buffer (R0010, Beijing Solarbio Science & Technology Co., Ltd., Beijing, China) in strict accordance with the instructions. The protein concentration was determined using a BCA kit (20201 ES76, Yeasen Company, Shanghai, China). Then, the protein was separated by polyacrylamide gel electrophoresis and then transferred to PVDF membranes by wet transfer method. Next, the membranes were blocked using 5% BSA at room temperature for 1 h and probed overnight at 4 °C with the following diluted primary antibodies: mouse anti-human GAPDH (ab9425, 1:2500, Abcam, Cambridge, UK), JAK2 (ab39636, 1:1000, Abcam, Cambridge, UK), p-JAK2 (ab195055, 1:1000, Abcam, Cambridge, UK), STAT3 (ab31370, 1:500, Abcam, Cambridge, UK), and p-STAT3 (ab86430, 1:500, Abcam, Cambridge, UK). The membranes were washed for three times (5 min/time) with Tris-buffered saline Tween-20 (TBST), and horseradish peroxidase (HRP)-labeled goat anti-rabbit immunoglobulin G (IgG) (ab205718, 1:20,000, Abcam, Cambridge, UK) was added for 1 h of incubation at room temperature. Then, ImageJ 1.48u software (National Institutes of Health) was performed for protein quantification analysis. The ratio of the gray value of the target band to GAPDH was representative of the relative protein expression. The experiment was repeated three times.
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8

Sprague Dawley Rat Hepatoprotective Assay

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PTS (C16H16O3, molecular weight: 256.3 g/mol, purity ≥99%) was purchased from Lifome Technologies LLC (CAS: 537-42-8). Specific pathogen-free male Sprague Dawley rats (250–300 g) were purchased from the Laboratory Animal Center of Zhejiang University. The antibodies were purchased from Abcam as were as follows: anti-cleaved caspase-3 antibody (ab49822), anti-caspase-9 antibody (ab184786), anti-B-cell lymphoma-2 (Bcl-2) antibody (ab59348), anti-Bax antibody (ab32503), anti-α-smooth muscle actin (α-SMA) antibody (ab5694), anti-fibronectin antibody (ab2413), anti-laminin antibody (ab11575), anti-vimentin antibody (ab24525), anti-collagen I antibody (ab34710), anti-JAK2 antibody (ab108596), anti-phospho-JAK2 antibody (ab195055), anti-STAT3 antibody (ab119352), and anti- phospho-STAT3 antibody.
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9

JAK2 Inhibitor Tyrphostin AG490 Pathway

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For JAK2 inhibition, Tyrphostin AG490 (#3434) was purchased from Sigma-Aldrich Co. (St. Louis, MO, USA). Antibodies against p-JAK2 (ab195055) and ATM (2CI) were purchased from Abcam (Cambridge, UK) and Santa Cruz Biotechnology (Dallas, TX, USA), respectively. Antibodies against Chk1(LS-C352010), p-Chek1 (LS-C358948), Chk2 (LS-C358943), p-Chk2 (LS-C416418), p-ATM (LS-C353715) were all purchased from Lifespan BioSciences (Seattle, WA, USA). Antibodies against p-STAT1 (#8826) and p-STAT3 (#9145), γH2AX (#9718), ATR (#2790), p-ATR (#2853) and GAPDH (#2118) were purchased from Cell Signaling Technology (Danvers, MA, USA). The secondary antibodies for Western blot: peroxidase-conjugated AffiniPure Goat anti-Rabbit (#133499) and anti-Mouse (#133599) were purchased from Jackson ImmunoResearch (West Grove, PA, USA). For anesthesia, Ketamine and Xylazine were purchased from Hikma Pharmaceuticals (Amman, Jordan) and Bayer GMP (Bergkamen, Germany), respectively.
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10

Western Blotting Protein Expression Analysis

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Western blotting was carried out as previously described [22 (link)]. Briefly, total protein from tissues and cells was extracted by using a total cell protein extraction kit (KeyGen Biotechnology, Nanjing, China). Then, equivalent amounts of protein were separated by SDS-PAGE and transferred onto the polyvinylidene difluoride (PVDF) and blocked with 2% bovine serum albumin (Beyotime Biotechnology, Beijing, China) for 2 h. The membrane were incubated overnight at 4 °C with the primary antibodies: β-actin (1:2000; #20536-1-AP, Proteintech), XPR1 (1:1000; #14174-1-AP, Proteintech), IL6 (1:1000; #ab233551, Abcam), IL6 (1:1000; #ab233551, Abcan), p-JAK2 (1:500; #WL02997, Wanleibio, Shenyang, China), JAK2 (1:500; #ab195055, Abcam), p-STAT3 (1:1000; #WLP2412, Wanleibio), STAT3 (1:2000; #ab76315, Abcam), IGF2BP3 (1:1000; #14642-1-AP, Proteintech), followed washing with PBS/T (Phosphate Buffer Solution with 0.05% Tween20). Next, the membranes were incubated with horseradish peroxidase-linked secondary antibody (1:1000; #SA00001-2, Proteintech) at room temperature for 1 h. Finally, immunoreactive bands were displayed by a chemiluminescence ECL kit (Beyotime Biotechnology, Beijing, China) and quantified by Image J software (National Institutes of Health, Bethesda, MD, USA) while the β-actin was used as internal control.
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