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10 protocols using cd30 ber h2

1

Immunohistochemical Characterization of Tumors

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FFPE sections were subjected to immunoperoxidase analysis with monoclonal antibodies as follows: CD2, CD4, CD5, and CD56 (Novocastra Laboratories, Newcastle, UK); CD3, CD8, UCHL‐1/CD45RO, L26/CD20, Ber‐H2/CD30, and ALK1 (Dako, Santa Clara, CA); βF1 (T‐cell receptor [TCR] β chain; T Cell Science, Cambridge, MA); TCR 1153 (TCR‐γ; clone γ 3.20) and TCRδ constant region (clone 5A6.E9; Thermo Fisher Scientific),23 TIA‐1 (Coulter Immunology, Hialeah, FL), granzyme B (Monosan, Uden, the Netherlands), PD‐L1 (clone SP142; Spring Bioscience, Pleasanton, CA), and ALK 5A4.28 The reactions were considered positive with a cut‐off of 30% (Figure 1D‐F). Tumor cell and microenviroment PD‐L1 expression was considered positive when ≥10% of the tumor cells and nonmalignant stromal cells showed membranous and/or cytoplasmic PD‐L1 staining, resepectively.29, 30To evaluate the presence of EBV small ribonucleic acids, we subjected formalin‐fixed, paraffin‐embedded sections to in situ hybridization using EBV‐encoded small nuclear early region (EBER) oligonucleotides, as previously reported.8
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2

Immunophenotyping and EBV Analysis of FFPE Samples

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FFPE sections were subjected to immunoperoxidase analysis with the following monoclonal antibodies: CD4, CD5, and CD56 (Novocastra Laboratories, Newcastle, United Kingdom); CD3, CD8, CD10, L26/CD20, Ber-H2/CD30, B-cell lymphoma 6 (BCL6), and 22C3/PD-L1 (Dako, Santa Clara, CA); CXCL13 (R&D Systems, Minneapolis, MN); granzyme B (Monosan, Uden, The Netherlands); SP98/inducible T-cell costimulator (ICOS) and γ 3.20/ T-cell receptor γ (TCR-γ; Thermo Fisher Scientific); programmed cell death protein 1 (PD-1; Abcam, Cambridge, United Kingdom); βF1 (TCR β chain; T Cell Science, Cambridge, MA); H-41/TCRδ (Santa Cruz Biotechnology, Dallas, TX); and T-cell intracellular antigen 1 (TIA-; Coulter Immunology, Hialeah, FL). The reactions were considered positive with a cutoff of 30%. Neoplastic PD-L1 expression (nPD-L1) was considered positive if ≥10% of the tumor cells had membranous and/or cytoplasmic PD-L1 staining. A case was considered positive for PD-L1 in the microenvironment when ≥20% comprised nonmalignant cells with moderate or strong membrane or cytoplasmic PD-L1–specific staining, among the total tissue cellularity.13 (link)
We subjected FFPE sections to ISH using EBER oligonucleotides as previously reported to evaluate the presence of EBV small ribonucleic acids.3 (link)
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3

Multiplex Immunohistochemistry for Tumor Profiling

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mIHC was performed using an Opal automation Multiplex IHC kit (PerkinElmer NEL801001KT or NEL821001KT, or equivalent) on Leica BOND Rx platform followed by IF 6-colorWJJ-CD30 protocol in CAP-controlled area within the Oncology and Immunology Unit of WuXi AppTec. Human FFPE specimens were labeled with different primary antibodies (CD30 Ber-H2, Dako M0751; FcγRΙ+ OTI3D3, Abcam ab140779; CD68 KP-1, Ventana 790–2931; PD-L1 SP263, Ventana 790–4905; CD8 SP57, Ventana 790–4460), followed by appropriate secondary antibodies (Polymer HRP from Opal automation Multiplex IHC kit) and different Opal dyes, and finally counterstained with DAPI (spectral 4′,6-diamidino-2-phenylindole), rabbit immunoglobulin G (IgG; Abcam ab172730, EPR25A), and mouse IgG1 (Abcam ab18443, kappa monoclonal MOPC-21) were used as isotype control. Whole slide images were acquired for each case using a Leica Aperio VERSA 8 automated microscope. Image analysis was performed using the HALO software package (Indica Labs), and segmentation and mark-up of individual cells were performed, reviewed, and scored blinded by two pathologists using the IndicaLabs-HighPlex FL module.
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4

Immunohistochemical Analysis of EBV-Related Lymphomas

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Tissue samples were fixed in 10% formalin and embedded in paraffin (FFPE), followed by staining of 3 μm-thick sections with hematoxylin and eosin. The immunohistochemistry for 12 EBVMCU cases was performed by an autoimmunostainer using BenchMark ULTRA (Ventana, Oro Valley, AZ, USA) and Leica Bond-III (Leica Biosystems, Wetzlar, Germany). Monoclonal antibodies were as follows; anti-CD3/LN10, CD20/L26, CD10/56C6, BCL6/LN22, EBNA2/PE2 (Novocastra Laboratories, Newcastle, UK), CD30/Ber-H2, MUM-1/MUM1p, LMP1/C.S1-4 (DAKO, Santa Fe, CA, USA), CD15/MMA (Becton Dickinson and Company, NJ, USA), PD-L1/E1J2J (Cell Signaling Technology, MA, USA), PD-L1/SP142 (Roche, Basel, CHE). EBV infection was evaluated by in situ hybridizations for EBV-encoded small RNA (EBER) oligonucleotide probe (PB0589, Leica Biosystems) on FFPE sections using Leica Bond-III.
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5

Immunohistochemical Analysis of Mouse Spleen and Lymph Node

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Three-µm-thick tissue sections were cut from formalin-fixed, paraffin-embedded (FFPE) tissue blocks containing mouse SPL and LI. Staining was performed according to standard protocols for Giemsa. Immunohistochemistry analyses were performed using the Benchmark Ultra automated instrument (Ventana/Roche Tissue Diagnostics, Mannheim, Germany). Following antibodies were used for tissue staining: Ki67 (clone RM9106-S1; ThermoScientific), CD20 (clone M0755; Dako), CD30 (Ber-H2; Dako), CD3 (clone M7254; Dako), programmed cell death ligand 1 (PD-L1; clone 22C3; Dako), CD8 (clone C8/144B; Dako, Copenhagen, Denmark), CD4 (clone SP35; Zytomed Systems, Berlin, Germany), PD-1 (MRQ-22; Medac Diagnostika, Wedel, Germany), FoxP3 (cat. number 560046; BD) (vendor information available in Table S10). For antibody binding detection, the 3,3-diaminobenzidine based UltraView reagent was used according to the manufacturer’s recommendations. EBER-1 detection was performed by an in situ hybridization method (EBER 1 DNP Probe, Ventana/Roche Tissue Diagnostics) and the automated Benchmark Ultra instrument. Whole Slide Scans were produced using an Aperio AT2 scanner (Leica Biosystems), images were taken using the ImageScope software, and trained pathologists evaluated staining results.
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6

Immunohistochemistry Profiling of Lymphomas

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For immunohistochemistry, 3-μm-thick sections were tested using a Ventana BenchMark XT immunostainer (Ventana, Tucson, AZ). Immunohistochemistry using avidin–biotin complex was performed using the panel of the following antibodies: CD30 (BerH2, 1:50; Dako), CD117 (c-Kit) (A4502, 1:100; Dako) and in 25 patients CD2 immunostaining (AB75, 1:50; Novocastra) was performed. In one patient with atypical presentation, a larger panel of immunomarkers was performed (not shown).
The intensity of CD30 and CD117 immunostaining was graded as: negative (0), weak (+), intermediate (++) and strong (+++). The percentage of CD30 positive cells examined was defined as negative, low (<10%), intermediate (10%–50%), and high (>50%).
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7

Immunohistochemical Analysis of Lymphoid Tissue

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Immunohistochemical staining was performed on 3μm sections of formalin fixed paraffin embedded lymph node biopsies of HL patients or non-human primates. The primary antibodies used were mouse anti-human CD20 (L26, Dako), CD83 monoclonal antibodies (mAb; F5, Santa Cruz Biotechnology), CD30 (Ber-H2, Dako), and staining was performed on a Leica Bond III Autostainer (Leica Biosystems) using a Bond Polymer Refine Detection kit for visualization with 3, 3′-diaminobenzidine (DAB). Images were taken with an Olympus BX51 microscopy with an Olympus PP71 camera using Olympus labSens software.
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8

Immunohistochemical Analysis of Lymphoid Neoplasms

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Pathological specimens were fixed in 10% neutral buffered formalin, embedded in paraffin, and then subjected to histopathological examination. The monoclonal antibodies used for immunohistochemistry (IHC) were: anti-CD3 (PS1; Nichirei Biosciences), CD5 (4C7; Leica Biosystems, Newcastle upon Tyne, UK), CD10 (56C6; Leica Biosystems), CD20 (L26; Leica Biosystems), CD30 (Ber-H2; DAKO, Glostrup, Denmark), CD79a (JCB117; DAKO), BCL2 (124; DAKO), BCL6 (LN22; Nichirei Biosciences), MUM1 (NCL-L-MUM1; Leica Biosystems), Ki-67 (MIB-1; DAKO), MYC (Y69; Abcam PLC, Cambridge, UK), BCL3 (clone 1E8; Novocastra, Newcastle upon Tyne, UK), and PD-1 (NAT105; Abcam). Insitu hybridization (ISH) for Epstein-Barr virus (EBV)-encoded RNA (EBER) was performed using EBER Probe (Leica Biosystems) according to the manufacturer’s instructions.
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9

Immunohistochemical Profiling of Tissue Samples

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The tissue slides were deparaffinized in xylene, hydrated in alcohol, and baked in a microwave (30 min in Tris buffer pH 9). Endogenous peroxidase was blocked. Staining was performed on the Benchmark ultra-automated stainer (Ventana) using diamino-benzidine as chromogen (Dako, Glostrup, Denmark). The following antibodies were used: AE1/E3 (clone PCK26, Ventana), KL1 (clone KL1, HIS-TOLS reagent), EMA (clone E29, Ventana), P63 (4A4, Ventana), S100 protein (clone poly Z311, Dako), SOX10 (EP268, BioSB), Desmin (clone DE-R11, Ventana), Myogenin (clone LO26, Leica), MYOD1 (clone EP212, Cell marque), ALK (clones D5F3, Cell Signaling Technology and clone 1A4, Novocastra), CD99/MIC2 (12E7, Dako), ETV4 (clone 16, Santa Cruz), CD30 (BerH2, Dako), CD4 (4B12, Novocastra), and CD7 (SP94, Ventana).
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10

Immunohistochemical Analysis of Hematological Malignancies

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The biopsied materials were fixed in 10% neutralbuffered formalin, embedded in paraffin, cut into 4-mm-thick sections, and stained with hematoxylin and eosin for routine histopathological evaluation. All specimens were diagnosed by 2 pathologists (AMM and HT) according to the World Health Organization Classification of Tumours of Haematopoietic and Lymphoid Tissues published in 2008. 12 Immunohistochemical analysis of formalin-fixed, paraffinembedded tissues was performed by standard procedures. Antibodies against the following antigens were used: CD3 (PS1, 1:25; Novocastra, Newcastle, UK), CD5 (4C7, 1:100; Novocastra), CD10 (56C6, 1:100; Novocastra), CD15 (MMA, 1:100; Becton Dickinson, Tokyo, Japan), CD20 (L26, 1:200; Dako, Glostrup, Denmark), CD23 (1B12, 1:100; Novocastra), CD30 (Ber-H2, 1:100; Dako), CD56 (1B6, 1: 100; Novocastra), CD138 (MI15, ready for use; Leica, Newcastle, UK), ALK (ALK1, 1:200; Dako), Bcl-2 (124, 1: 100; Dako), cyclin D1 (SP4, ready for use; Nichirei, Tokyo, Japan), granzyme B (GrB-7, 1:200; Dako), TIA-1 (26gA10F5, 1:1,000; Immunotech, Marseille, France), TdT (poly, 1:20; Dako), k (poly, 1:20,000; Dako), and l (poly, 1: 40,000; Dako). In situ hybridization with an EBV-encoded small nuclear early region (EBER)-1 probe (Dako) was performed to detect possible EBV infection.
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