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Methanol and water

Manufactured by Thermo Fisher Scientific
Sourced in United Kingdom, United States

Methanol and water are commonly used solvents in various laboratory applications. Methanol is a polar, volatile organic compound, while water is a universal solvent. These substances can be used for purposes such as sample preparation, cleaning, and extraction, depending on the specific requirements of the laboratory work.

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4 protocols using methanol and water

1

HILIC Analysis of Metabolite Standards

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All solvents and mobile phase additives were LC-MS-grade. Acetonitrile (CHROMASOLV LC-MS) was purchased from Scientific Laboratory Supplies (Wilford, UK), methanol and water were purchased from Fisher Scientific (Leicestershire, UK), ammonium bicarbonate was obtained from Fluorochem (Hadfield, UK), and ammonium hydroxide was from Sigma-Aldrich (Gillingham, UK). All authentic chemical standards used for the annotation of metabolites were of analytical or higher grade and were obtained from various suppliers (Sigma-Aldrich (Gillingham, UK), VWR (Leicestershire, UK), and Fisher Scientific (Leicestershire, UK)). They were accurately weighed and dissolved in appropriate volumes of LC-MS-grade water to obtain individual stock solutions at concentrations of 1 mg/mL. Appropriate amounts of each stock solution were mixed to obtain four standard mixtures at concentrations of 25 µg/mL in water that were further prepared for HILIC analysis, as described below. Stable isotope-labelled internal standards AMP-15N5, ADP-15N5, and ATP-13C10 were purchased from Sigma-Aldrich (Gillingham, UK) and prepared in a mixture at a concentration of 48 µg/mL.
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2

MALDI-MS Analysis of MDA Isomers

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Sample preparation and experimental parameters have been previously described in detail for ESI studies, but a few details will be mentioned here.1 (link) Methylenedianiline (MDA) 2-ring isomers (2,2′-MDA, 2,4′-MDA, and 4,4′-MDA) were provided by Dr. Stefan Wershofen (Bayer MaterialScience AG, 47812 Krefeld, Germany). Methanol and water with 0.1% formic acid were obtained from Fisher Scientific (Waltham, MA). Tetralkylammonium salts, α-cyano-4-hydroxycinnamic acid (CHCA), alkali salts, and 2,7-diaminofluorene (2,7-DAF) were obtained from Sigma-Aldrich (St. Louis, MO). Samples were dissolved at a concentration of 1 mg/mL in 9:1 methanol/water containing 0.1% formic acid (v/v). Each MDA isomer was combined in a 10:1 matrix-to-analyte ratio and 2 to 3 layers of 0.5 μL of sample were spotted on a 100-well MALDI plate.
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3

Preparation of 9-Aminoacridine Hydrochloride

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9-Aminoacridine hydrochloride (9-AA) was purchased from Sigma–Aldrich. Water and Methanol was purchased from Fischer Scientific at the highest purity grade available and used without further purification.
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4

Detailed Isotopic Analysis Protocol

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The internal standard, sodium sulphite-34S (Na234SO3, 95%), in addition to formaldehyde (37%), toluene, ammonium acetate (Sigma Ultra, minimum 98%) and sodium sulphite (Na2SO3, ≥ 98%) were acquired from Sigma-Aldrich (St. Louis, MO, USA). LC-MS-grade acetonitrile, water and methanol, in addition to glacial acetic acid, ethanol, methylene chloride, hydrogen peroxide (30%), sodium hydroxide (certified 0.1 and 0.01 N), potassium hydroxide pellets (85%), potassium dihydrogen phosphate, barium chloride, concentrated phosphoric acid and concentrated hydrochloric acid, were purchased from Thermo Fisher Scientific (Pittsburgh, PA, USA). Methyl red from Mallinckrodt Baker (Phillipsburg, NJ, USA) was used in the MW titration. Samples were diluted and extracted using 18 MΩ water obtained from an Aqua Solutions water purification system (Jasper, GA, USA). Fresh vegetables and all ingredients used for making garlic products were purchased from grocery stores located in Greenbelt, MD, USA. All food samples were stored according to the manufacturers’ suggested storage conditions.
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