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6 protocols using vx 680

1

Mitotic Arrest and Synchronization Techniques

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HeLa S3 and HEK293 cells were cultured at 37 °C in 5% CO2 in Dulbecco’s Modified Eagle Medium (DMEM) (Cellgro, Herndon, VA) supplemented with 10% Fetal Bovine Serum (FBS) (Mediatech, Herndon, VA), and 1% Penicillin-Streptomycin (Mediatech). HeLa-Flag-YY1 cells are stably transfected with pCS2(+)-Flag-YY1, the generation of this cell line has been previously described28 . Cells were arrested at pro-metaphase of mitosis by adding nocodazole (100 ng/ml) or Taxol (100 nM) (Sigma) for 16–18 hours; cells were then collected by shake-off. For thymidine-nocodazole synchronisation, cells were blocked in thymidine (Sigma) at 2.5 mM for 18 hours, released for 3 hours, and then nocodazole was added for 12 hours. Cells were then collected, washed, and re-plated into fresh media to progress through mitosis. For the inhibition of Aurora A activity, VX-680 (LC Laboratories, Woburn, MZ) was added, for 15 minutes, to cells blocked in mitosis by nocodazole. For Aurora A knockdown, cells were transfected with control scrambled siRNA or Aurora A siRNA (50 nM) using DharmaFECT reagent (Dharmacon, Chicago, IL). After 36 hours of knockdown, the cells were blocked in mitosis with nocodazole for 18 hours. For transfection of mammalian expression plasmids, the Polyjet transfection reagent (SignaGen, Rockville, MD) was used according to the manufacturer’s instructions.
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2

Evaluation of Anti-Cancer Agents in Mice

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Mice were administrated the following single agents i.p. daily for 7 or 14 days: 4 mg/kg rapamycin (LC Laboratories), 50 mg/kg JQ1 (Bradner Laboratory, Dana-Farber Cancer Institute), or 75 mg/kg VX-680 (LC Laboratories). For combination treatments, mice were treated daily for 7 or 14 days with 4 mg/kg rapamycin and 50 mg/kg JQ1 or 4 mg/kg rapamycin and 40 mg/kg VX-680. At indicated time points, BM and spleen were harvested for pathological and flow cytometric analysis.
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3

MTS Assay for Cell Viability

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An MTS [3-(4,5-dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)-2-(4-sulfophenyl)-2H-tetrazolium, inner salt] assay (a water-soluble form of the MTT assay) was performed as described in our previous study (12 (link)). OSU-03012 was purchased from Cayman Chemical Company (Ann Arbor, MI, USA). VX-680 was purchased from LC Laboratories (Woburn, MA, USA). The stock solutions of the inhibitors were prepared at 10 mM in DMSO, and stored at −20°C.
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4

Assessing Small Molecule Inhibitors

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All chemicals were resuspended in DMSO. NSC697923 (Sigma-Aldrich) was used at 20 µM. Nocodazole (Sigma-Aldrich) was used at 50 nM. MG132 (EMD Biosciences) was used at 10 µM. CC0651 (Thermo Fisher Scientific) was used at 50 µM. Taxol (Life Technologies) was used at 1 µM. PYR-41 (Santa Cruz Biotechnology) was used at 20 µM. TAK-243 (formerly MLN7243) was a gift from Hidde Ploegh (Whitehead Institute) and used at 25 µM. PR-619 (Sigma-Aldrich) was used at 100 µM. ZM447439 (R&D Systems) was used at 2 µM. VX680 (LC Laboratories) was used at 2.5 µM. Flavopiridol (Santa Cruz Biotechnology) was used at 5 µM. AZ3146 (Tocris) was used at 2 µM. BI2536 (Thermo Fisher Scientific) was used at 10 µM. Okadaic acid (VWR) was used at 1 µM. To dose cells, drugs were diluted in fresh media and then added to the cells. For immunofluorescence, cells were dosed for 15 min before fixation.
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5

In Vitro and In Vivo Experiments with VX-680, GDC-0941, Artemisinin, and JQ1

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For in vitro experiments, VX-680 and GDC-0941 (free base) were ordered from LC Laboratories (http://www.lclabs.com/); 99 % of pure artemisinin was ordered from ebiochem (http://www.ebiochem.com/product/artemisinin-99-uv-8157). JQ1 was shipped directly from the laboratory of James Bradner, MD at the Dana-Farber Cancer Institute. Doxorubicin was obtained from the UCSF inpatient pharmacy. For in vivo experiments, GDC-0941 (free base) was obtained directly from the laboratory of Kevin Shannon, MD, and JQ1 was obtained directly from the Bradner laboratory.
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6

Colorectal Cancer Cell Line Characterization

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The human colorectal cancer cell lines, including HCT116, DLD1, RKO, HT29, SW480, and SW48 were obtained from the American Type Culture Collection. Cell lines were last tested and authenticated for genotypes, drug response, morphology, and absence of mycoplasma in October, 2012. p53-knockout (KO) and PUMA-KO colon cancer cell lines and wide-type (WT) and PUMA-KO mouse embryonic fibroblasts (MEF) cells were previously described (13 (link)). All cell lines were maintained at 37°C in 5% CO2 and cultured in McCoy’s 5A modified media (Invitrogen) supplemented with 10% defined FBS (HyClone), 100 units/ml penicillin, and 100 µg/ml streptomycin (Invitrogen). For drug treatment, cells were plated in 12-well plates at 20% to 30% density 24 hours before treatment. The DMSO (Sigma) stocks of agents used, including ZM-447439 (Selleck Chemicals), VX-680, Gefinitib (LC Laboratories), 5-fluorouracil (5-FU; Sigma), BAY 11-7082 (Merck Chemicals), GX15-070 (Cayman Chemical), were diluted to appropriate concentrations with the cell culture medium. Human TNFα (R&D system) was diluted with phosphate-buffered saline. For NF-κB inhibition, cells were pre-treated with BAY 11–7082 for 1 hour before ZM-447439 treatment. Transfection of expression constructs of WT and constitutive AKT was performed as described (12 (link)).
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