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5 protocols using rat anti mouse cd8a

1

Multicolor Flow Cytometry Panel for Immune Cell Analysis

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FITC Rat Anti-Mouse CD3 (#561798), PerCP-Cy™5.5 Rat Anti-Mouse CD4 (#561115), FITC Rat Anti-Mouse CD8a (#561966), PE Rat Anti-Mouse CD25 (#561065), FITC Rat Anti-CD11b (#561688), PE Rat Anti-Mouse CD49b (DX5, #561066), PerCP-Cy™5.5 Rat Anti-Mouse CD335 (#560800), Alexa Fluor® 488 Rat anti-Mouse Foxp3 (#560407), PE Rat Anti-Mouse Ly-6G and Ly-6C (Gr-1, #561084), PerCP-Cy™5.5 Mouse Anti-Mouse NK-1.1 (#561111) and Foxp3 Fixation/Permeabilization Buffer Set (#560409) were all purchased from BD Pharmingen™ (BD Biosciences, San Diego, CA, USA). Cleaved-caspase-3 (E-AB-30004, Elabscience Biotechnology Inc, Houston, TX, USA), BAX (#50599-2-lg, Proteintech Inc., Rosemont, IL, USA), Ki-67 (#E-AB-2202, Elabscience Biotechnology Inc.), granzyme B, Indoleamine 2,3-dioxygenase (IDO), Forkhead box protein P3 (FOXP3), CD49b and Interferon-gama (IFN-γ Rat Anti-Mouse PD-L1 (10F.9G2, Bioxcell, Lebann, NH, USA) antibodies were all purchased from different companies as listed.
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2

Histology and Immunofluorescence Staining

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For histology, sections were stained with hematoxylin and eosin (H&E), according to established protocols. For immunofluorescence, the sections were air-dried at room temperature for 15 min and with 4% paraformaldehyde for 10 min. Sections were then rinsed with 1 X PBST (0.25% Triton-X100). Blocking was performed for 30 min at room temperature in 5% normal serum in PBS. Sections were incubated with primary antibodies diluted in PBS for 2 h at room temperature. Sections were washed with 1 X PBS and incubated with secondary antibodies diluted in PBS for 1 h at room temperature. After washing again, sections were mounted with the VECTASHIELD HardSet mounting medium with DAPI (Vector Laboratories, Burlingame, CA) and imaged. Primary antibodies used were: rat anti-mouse Ly6G and rat anti-mouse F4/80 (BioLegend, San Diego, CA), rat anti-mouse CD31, rat anti-mouse CD4, and rat anti-mouse CD8a (BD PharMingen, Mississauga, ON). Alexa Fluor 546, goat anti-rat (Life Technology, Burlington, ON) was used as the secondary antibody. All histology and immunofluorescence images are representative of at least three independent animal experiments.
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Immunohistochemical analysis of pancreas and colon

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Pancreas and colon specimens were fixed with 4% paraformaldehyde, incubated with 30% sucrose, embedded in OCT compound (Olympus), and frozen in dry ice. 10-μM sections were permeabilized and blocked with Image-It FX signal enhancer (Invitrogen, Molecular Probes). The following antibodies were used: rabbit anti-GFP (Abcam, 1/100), rat anti-mouse CD8a (BD Pharmingen, 1/100), mouse anti-Cytokeratin 8 (TROMA I, 1/50), goat anti-rabbit Alexa Fluor 488 (Molecular Probes, 1/500), goat anti-mouse Alexa Fluor 488 (Molecular Probes, 1/500), and goat anti-rat Cy3 (Jackson ImmunoResearch, 1/500). Slides were mounted with Vectashield mount medium containing DAPI (Vector Laboratories).
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4

Multiparameter Flow Cytometry of Immune Cells

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BAL fluid, lungs, and mediastinal LNs were analyzed by FACS (FACSCalibur BD Biosciences). The following mAbs were used for T cell analysis: rat anti-mouse CD4, rat anti-mouse CD8a, anti-CD3e, allophycocyanin-conjugated rat anti-mouse CD25, anti-CD62L, and anti-TCR Vβ5.1/5.2 (all from BD Pharmingen). Granulocytes in the BAL were detected using rat anti-mouse GR-1 (BD Pharmingen).
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5

Immunofluorescence Analysis of Tumor Samples

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Tumor samples were collected and progressively frozen in cold 2-methylbutane solution. Sections (6μm) were fixed in 100% cold acetone, blocked with 8% normal goat serum for 2 hours, and incubated with the appropriate primary antibodies (rat anti-mouse CD11b, Hamster anti-mouse CD11c, rat anti-mouse CD8a or rat anti-mouse CD11b, BD Biosciences) for 2 hours at room temperature. Sections were washed 3 times with PBS and incubated with goat anti-rat secondary antibodies coupled to Alexa488 or 597 for CD11b, CD8 and CD4 studies or with Cy5-goat anti-Hamster for CD11c studies. Nuclei were stained with 4’,6-diamidino-2-phenylindole (DAPI). The slides were washed and mounted in DAKO fluorescent mounting medium. The detection of apoptotic cells was performed using a TUNEL-assay (ApoTag Fluorescein In Situ Apoptosis Detection Kit, Promega) in accordance with the manufacturer’s instructions. Immunofluorescence images were collected on a Nikon microscope (Eclipse TE2000-U) and pixels of fluorescence or area of staining was quantified using MetaMorph Software.
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