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Amicon ultra 15 centrifuge filter unit

Manufactured by Merck Group
Sourced in United States

The Amicon Ultra-15 Centrifuge Filter Unit is a laboratory equipment designed for sample concentration and buffer exchange. It utilizes a centrifugal filtration process to separate and concentrate molecules based on their molecular weight. The device features a membrane with a specified molecular weight cutoff to retain the desired sample components while allowing smaller molecules to pass through.

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6 protocols using amicon ultra 15 centrifuge filter unit

1

Isolation and Characterization of Neuronal Exosomes

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Exosomes were prepared from neuronal primary culture NCM. The medium was collected and centrifuged at 300×g for 10 min and 2000×g for 10 min at 4 °C. Following centrifugation, the supernatant was passed through a 0.22-μm sterile filter (Steritop™ Millipore, MA, USA). Then, the filtered supernatant was transferred to the upper compartment of an Amicon Ultra-15 Centrifuge Filter Unit (Millipore) and centrifuged at 4000×g until the volume of the upper compartment was reduced to ~ 200 μL. The liquid was loaded onto the top of a 30% sucrose/D2O cushion in a sterile Ultra-Clear™ tube (Beckman Coulter, CA, USA) and underwent a 10,000×g centrifugation step for 60 min at 4 °C in an Optima L-100 XP Ultracentrifuge (Beckman Coulter) in order to purify the exosomes. Partially purified neuron-derived exosomes were recovered using an 18-G needle diluted in PBS and centrifuged at 4000×g at 4 °C in a filter unit until the final volume reached 200 μL. Exosomes were used for downstream experiments or stored at − 80 °C
A Nanosight LM10 System (Nanosight Ltd., Navato, CA) was used to analyze the distribution of vesicle diameters from the exosomes. A transmission electron microscope (TEM; Tecnai 12; Philips, Best, The Netherlands) was used to observe the morphology of the acquired exosomes. Western blotting was used to determine specific exosome surface markers, such as CD9, CD63, and CD81.
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2

Purification of HDL from Serum

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HDL were isolated from 600 μl of serum by immunoprecipitation using goat anti-apoA-I beads as previously described. Briefly, human serum was applied to a column containing goat anti-human apoA-I antibody covalently coupled to Cyanogen bromide (CNBr)-activated Sepharose 4B (Amersham Pharmacia Biotech). To remove proteins non-specifically bound to the beads, the column was washed 10 times with 1X Tris Buffered Saline (TBS). HDL that bound to the column were eluted with stripping buffer (0.1 M acetic acid) and neutralized immediately with 1 M Tris, pH 11 (final concentration, 0.11 M). Samples were further concentrated using Amicon Ultra-15 centrifuge filter unit (Millipore, Catalogue # UFC901024) and Amicon Ultra-0.5, ultracel-10 membrane (Millipore, Catalogue # UFC501096).
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3

Exosome Isolation from Conditioned Media

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MSCs were incubated for 48 h after reaching 80% confluency, replacing the media with exosome-depleted FBS. Then, the supernatant was collected and centrifuged successively at 300 × g for 10 min and 2,000 × g for 10 min at 4 °C. After centrifugation, the cell supernatant was filtered through a 0.22-μm sterile filter (Steritop™ Millipore, Burlington, MA) and applied to the upper compartment of an Amicon Ultra-15 Centrifuge Filter Unit (Millipore). Then the supernatant was centrifuged at 4,000 × g till the volume decreased to 200 μl in the upper compartment. The ultra-filtered supernatant was then washed twice with PBS and re-filtered to another 200 μl. The liquid was loaded onto the top of a 30% sucrose/D2O cushion in a sterile Ultra-Clear™ tube (Beckman Coulter, Asphalt, CA, USA), followed by centrifugation at 100,000 × g for 60 min at 4 °C with an optima L-100 XP Ultracentrifuge (Beckman Coulter). Exosomes were stored at -80 °C.
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4

Pressure-Induced Tyr/Trp Spectral Changes

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Pressure titrations were recorded using an ISSK2 spectrofluorometer (ISS, Inc.) equipped with a high-pressure cell. Tyr/Trp emission spectra from p53 family members were collected from 1 bar to 3.1 kbar at 25 °C. Protein samples of 5 μM were left for 5 min at each pressure before excitation. Tyr/Trp residues were excited at 280 nm using a slit width of 1 mm, and emission was recorded from 290 to 400 nm using a slit width of 2 mm and step-size of 2 nm. Concomitant light scattering measurements were taken after each pressure increment with excitation at 320 nm and emission from 300 to 340 nm (slit width of emission were reduced to 0.5 mm). Changes in Tyr/Trp emission spectra were quantified as the center of spectral mass, CM = ∑viFi/∑Fi where Fi stands for fluorescence emitted at wavenumber vi and the summation is carried out over the range of appreciable values of F, and subtracted to the value at 1 bar (Δ center of mass, cm−1). Increased light scattering against pressure is shown as the area under the scattering plot. Protein buffers were changed to 50 mM Tris-HCl pH 7.4, 150 mM NaCl and 5 mM DTT using 10,000 MWCO Amicon Ultra-15 centrifuge filter units (Millipore). Experiments were performed three times with different protein preparations and results are expressed as the avg. ± s.e.
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5

Purification of Fusion Proteins by SEC

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The fusion proteins were purified by size exclusion chromatography (SEC) using an AKTA Purifier UPC 100 system (GE Healthcare, Wauwatosa, WI, USA) with a Hiprep 26/60 Sephacryl S-200 HR column (60 cm × 26 mm) (GE Healthcare, Wauwatosa, WI, USA). The proteins were eluted with 30 mM Tris, 100 mM NaCl, pH 6.8. The flow rate was 1.0 mL/min and the detection wavelength was set at 280 nm. The protein eluted in the first peak was collected and concentrated on Amicon Ultra-15 centrifuge filter units with a molecular mass cutoff of 50 kDa (Millipore, Billerica, MA, USA). After a final buffer exchange to a buffer containing 10 mM histidine, 260 mM glycine, 1% sucrose, 0.005% Tween 80, the purified fusion protein was stored at −80 °C until use.
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6

Cryo-TEM Analysis of LNP-Encapsulated mRNA

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LNPs loaded with mRNA were concentrated (Amicon Ultra-15 Centrifuge Filter Units, Millipore, Billerica, MA) to a total lipid concentration of ∼25 mg/mL prior to analysis. Formulations were deposited onto glow-discharged copper grids and vitrified using an FEI Mark IV Vitrobot (FEI, Hillsboro, OR). Cryo-TEM imaging was performed using a 200 kV Glacios microscope equipped with a Falcon III camera at the UBC High Resolution Macromolecular Cryo-Electron Microscopy facility (Vancouver, BC, Canada).
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