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Beyofasttm sybr green qpcr mix

Manufactured by Bio-Rad
Sourced in China

BeyoFastTM SYBR Green qPCR Mix is a pre-formulated reagent designed for real-time quantitative PCR (qPCR) applications. It contains SYBR Green I dye, Taq DNA polymerase, and necessary components for efficient and sensitive qPCR amplification.

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3 protocols using beyofasttm sybr green qpcr mix

1

Quantifying Long Non-coding RNA Expression

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Total RNA was extracted using the EastepTM total RNA extraction kit (Promega, Beijing, China) and reverse transcribed to cDNAs with the GoScript Reverse Transcription System (Promega, Beijing, China). qRT-PCR was performed using GoTaq qPCR Master Mix (Promega, Beijing, China) to determine the relative expression amount of the mRNA. qRT-PCR was carried out using BeyoFastTM SYBR Green qPCR Mix following the manufacturer's guidelines (Bio-Rad, China). GAPDH transcription levels were used as an internal control. The 2^(-△△Ct) method was used to calculate the relative expression levels. All these primers were provided by Tsingke Biotechnology Co (Beijing, China) and were available in Table 1.

Primer sequences used in qRT-PCR.

Table 1
PrimersSequence
LINC02321 Forward5′-ACCCTTCTGACCACCAAGTG-3′
LINC02321 Reverse5′-CAAGCCAAGCCTTGAAAAAG-3′
GAPDH Forward5′-CACATCGCTCAGACACCATG-3′
GAPDH Reverse5′-TGACGGTGCCATGGAATTTG-3′
RUVBL2 Forward5′-GACATCAAGCGGGTCTACTCA-3′
RUVBL2 Reverse5′-CTCAGGGCAACCACACATACAC-3′
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2

Quantitative RT-PCR for Gene Expression

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Total RNA was isolated from cells or human tissues using Trizol reagent (Invitrogen, Carlsbad, CA). The cDNA was generated from each 2 ug RNA sample using All-in-One™ First-Strand cDNA Synthesis Kit (GeneCopoeia, Cat. No QP006). The temperature protocol for reverse transcription was: 28 ºC for 2 min, 42 ºC for 30 min, and 85 ºC for 5 min. cDNA was subjected to initial denaturation at 94˚C for 2 min, followed by 40 cycles at 95˚C for 15 s and 60–68 ºC for 30 s, after the end, it starts from 65˚C to 95 ºC, rising by 0.5 ºC per second, using the BeyoFastTM SYBR Green qPCR Mix (Bio-Rad, Cat. No 1708882AP). The primers used in qRT-PCR are shown in Additional file 3: Table S2. The method was used for relative quantification and the quantifications were normalized by taking GAPDH as an internal reference. All experiments were repeated in three times.
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3

Cellular Fractionation and Gene Expression Analysis

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According to the manufacturer’s fractions, the Cytoplasmic & Nuclear RNA Purification Kit (Norgen, Cat. No 21000, Canada) was used to prepare the nuclear and Cytoplasmic RNA fraction from 1 × 106. After using the manufacturer’s instructions to isolate RNAs, RNA concentrations of nuclear and cytoplasmic were measured at OD260, and their purity was calculated with OD260/OD280. Following the manufacturer’s guidelines, a All-in-One™ First-Strand cDNA Synthesis Kit (GeneCopoeia, Cat. No QP006) and BeyoFastTM SYBR Green qPCR Mix (Bio-Rad, Cat. No 1708882AP) were applied to determine the expression level of DIO3OS in the nucleus (U6 as an internal reference) and cytoplasm (GAPDH as an internal reference). The primer sequences are performed in Additional file 3: Table S2.
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