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4 protocols using cell lysis buffer for western blotting and immunoprecipitation

1

Protein Extraction and Western Blot Analysis

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Total protein was extracted using a cell lysis buffer for Western blotting and immunoprecipitation (Beyotime, Shanghai, China) containing PMSF and a protease inhibitor cocktail. Proteins (30 μg/well) were separated using 10% SDS/PAGE and transferred onto PVDF membranes (Millipore, Billerica, MA, USA). The primary antibodies used in this study were against anti-HAPSTR1 (1:1000, OTl2B8; Origene), anti-HAPSTR1 (1:500, OTI2D1; Novusbio, Centennial, CO, USA), anti-LRPPRC (1:5000, 21175-1-AP; Proteintech), anti-β-actin (1:1000, 20536-1-AP; Proteintech), anti-Ub (1:1000, 10201-2-AP; Proteintech), anti-N-cadherin (1:5000, 66219-1-Ig; Proteintech), anti-Beclin1 (1:2000, T55092; Abmart, Berkeley Heights, NJ, USA), anti-P62/SQSTM1 (1:2000, T55546; Abmart), anti-ATG5 (1:2000, T55766; Abmart), anti-vimentin (1:500, WL01960; Wanleibio), anti-snail (1:500, WL01863; Wanleibio), and anti-E-Cadherin (1:500, WL01482; Wanleibio).
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2

Western Blotting and Immunoprecipitation for HBx, DHX9, and TIMP3

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Total proteins were extracted using cell lysis buffer for western blotting and immunoprecipitation (Beyotime) with protease and phosphatase inhibitors (Selleck). Equal amounts of total proteins (30 μg) were separated using 10% SDS-PAGE gel electrophoresis and transferred onto polyvinylidene fluoride membranes. The membranes were incubated with primary antibodies specific for HBx (1:500 dilution; Abcam), DHX9 (1:1,000 dilution; Abcam), TIMP3 (1:500 dilution; ImmunoWay) and tubulin (1:1,000 dilution; Cell Signaling Technology) at 4°C overnight, followed by incubation with secondary antibodies (1:10,000; Cell Signaling Technology) at room temperature for 1 h. Signals were detected using West Pico PLUS Chemiluminescent Substrate (Thermo Fisher Scientific), and the images were acquired using an Optimax X-ray Film Processor (Protec).
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3

12-epi-napelline Cytotoxicity Evaluation

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K-562 cells (5 × 105/well) were plated into 6-well plates. After 5 h, they were treated with 12-epi-napelline (0, 12.5, 25, and 50 μg/ml) for 24 h. HL-60 cells (1 × 106/well) were plated into 6-well plates, incubated for 5 h, and treated with 12-epi-napelline (0, 12.5, 25, and 50 μg/ml) for 24 h. Cells were collected and lysed in 100 μl of cell lysis buffer for western blotting and immunoprecipitation (Beyotime Biotechnology, Shanghai, China) that was supplemented with phenylmethylsulfonyl fluoride (Beyotime Biotechnology, Shanghai, China). Total protein was extracted, and the protein concentration was determined using the Bradford Protein Assay Kit (Tiangen, Beijing, China). Total protein was mixed with an appropriate amount of 5x SDS-PAGE Sample Loading Buffer (Beyotime Biotechnology, Shanghai, China), boiled, separated by SDS-PAGE, and then transferred to polyvinylidene difluoride membranes, which was blocked with 5% nonfat dry milk in TBST buffer. The primary antibodies were added at proper dilution and incubated at 4°C overnight, and the secondary antibody was added and incubated for 60 min. Finally, the protein was measured by BeyoECL Plus (Beyotime Biotechnology, Shanghai, China) according to the manufacturer's protocol using a gel imaging system (SYSTEM Gel Doc XR+, Bio-Rad, Hercules, CA, USA).
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4

Western Blotting of CD40 in HASMCs

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The cell lysis buffer for Western blotting and immunoprecipitation (Beyotime, Shanghai, China) was used to isolate the proteins from the HASMCs and the aorta. Proteins were separated by SDS-PAGE and transferred to a 0.45μm PVDF membrane (Millipore, USA). The membranes were blocked with 5% nonfat milk for 1 h at room temperature and then incubated with the following primary antibodies overnight at 4 • C: CD40 (1:1000, #ab13545, Abcam, UK) and GAPDH (1:2000, #2118S, Cell Signaling Technology). After incubation with anti-rabbit IgG, HRP-linked antibody (1:3000, Proteintech, USA) for 1h, the protein bands were treated with Chemiluminescence reagent (Beyotime, Shanghai, China) and detected using the ChemiDoc™ Touch Imaging System (Bio-Rad, USA).
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