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20 protocols using smoothened agonist sag

1

Hedgehog Signaling Pathway Analysis

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NIH3T3 cells were cultured in DMEM containing 10% Bovine Calf Serum (ATCC). HEK 393T and Sufu -/- MEF cells were cultured in DMEM with 10% Fetal Bovine Serum (FBS) (Sigma Aldrich). Shh treatment was done by serum starvation for 24 hours (0.5% Bovine Calf Serum), then adding a recombinant mouse Shh N-terminal fragment (R&D Systems #464-SH) at 1 ug/ml overnight. Smoothened agonist SAG (Sigma Aldrich) treatment was done at 200 ng/ml for 8–12 hours. Cell transfections were performed using PolyJet in vitro DNA Transfection Reagent (SignaGen) following manufacturer’s instruction. Immunoprecipitation, immunostaining, and western blot analyses were carried out as described previously [47 (link)]. The antibodies used in this study are listed as follows: anti-Myc (9E10, Santa Cruz Biotechnology), anti-β-galactosidase (A11132, Life Technologies), anti-acetylated tubulin (T7451, Sigma Aldrich), anti-mGli2 (AF3635, R&D Systems), anti-mGli3 (AF3690, R&D Systems), anti-mKapβ2 (Ab10303, Abcam), anti-α-tubulin (T9026, Sigma Aldrich), anti-Histone3 (Ab1791, Abcam), and anti-BrdU (B8434, Sigma Aldrich).
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2

Liver Fibrosis Inhibition Protocol

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PB2, pentobarbital sodium salt, cyclopamine hydrate and Smoothened agonist (SAG) were purchased from Sigma‐Aldrich (Merck KGaA). Sorafenib tosylate was purchased from Selleck Chemicals. CCl4 was purchased from China Sinopharm International Corporation. TGF‐β1 was obtained from PeproTech. Alanine aminotransferase (ALT), aspartate aminotransferase (AST) and hydroxyproline detection kits were purchased from Nanjing Jiancheng Bioengineering Institute. Oligonucleotide primers were synthesized by Generay Biotech Co., Ltd. The PrimeScript RT Reagent kit and SYBR Premix Ex Taq were purchased from TaKaRa Biotechnology. The primary antibodies used in the study are listed in Table 1. Anti‐goat or antimouse secondary antibodies were obtained from Dako. Dulbecco's Modified Eagle Medium (DMEM) and foetal bovine serum (FBS) were from HyClone (GE Healthcare). The Annexin V‐FITC apoptosis detection kit was purchased from BD Biosciences. Growth factor‐reduced Matrigel was purchased from BD Biosciences. PB2, sorafenib and cyclopamine were dissolved in DMSO (<0.1% [v/v]) for in vitro treatment.
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3

Hedgehog Signaling Assays in Cell Lines

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ASZ001 (ASZ, gender: female) BCC cells were cultured in 154CF media (Life Technologies) supplemented with 2% chelated fetal bovine serum, Human Kerytinocyte Growth Supplement (Thermo Fisher), Penn-strep, and 0.05mM CaCl2. Experiments assaying hedgehog signaling carried out in serum-free conditions.
NIH-3T3 (gender: male) and HEK-293T (gender: female) cells were cultured in DMEM supplemented with 10% fetal bovine serum (FBS). Experiments assaying hedgehog signaling were carried out in 0–0.2% FBS supplemented with Smoothened Agonist (SAG, Sigma).
Mammalian cell transfection performed using FuGENE® 6 Transfection Reagent (Promega), Lipofectamine® LTX with Plus™ Reagent (Thermo Fisher), and MEF 1 Nucleofector® Kit (Lonza) per manufacturer protocol. Transient transfection mammalian expression vectors are included below. Stable expression produced by piggybac transposition.
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4

Protein Synthesis and Degradation Regulation

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Cycloheximide (CHX) was provided by SERVA (Heidelberg, Germany). MG-132 was purchased from Sigma-Aldrich (Darmstadt, Germany). HEK293T were incubated with 200μg/ml CHX for 2h, 6h and 12 h; and with MG-132 (5 μM) for 16 h.
Hyperconfluent HEK293T cells pre-starved for 24 h in serum-free DMEM medium were treated with 200 nM Smoothened Agonist (SAG, Sigma-Aldrich, Steinheim, Germany) for 48 h.
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5

Efficient Motor Neuron Differentiation from Stem Cells

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For motor neuron differentiation, cells were seeded at high density (5.2 × 104 cell/cm2) on Matrigel (Corning, Flintshire, United Kingdom)-coated plates in IMDM 20% FBS and sequentially exposed to SB431542 hydrate (10 μM, Sigma-Aldrich, United States), LDN193189 (100 nM Stemgent, Cambridge, MA, United States), CHIR-99021 (3 μM, Tocris Bioscience, Bristol, United Kingdom), basic FGF (10 ng/ml Thermo Fisher Scientific, United States), ascorbic acid (10 µM Sigma-Aldrich, United States), RA (100 nM Sigma-Aldrich, United States), Smoothened agonist (SAG) (500 nM, Sigma-Aldrich, United States), DAPT (10 μM, Tocris Bioscience, Bristol, United Kingdom), BDNF (10 ng/ml, R&D system, United States), GDNF (20 ng/ml, R&D system, United States), CTNF (10 ng/mL R&D system, United States) β-mercaptoethanol (βMOH) (25 µM Sigma-Aldrich, United States), Forskolin (10 µM STEMCELL Technologies, Vancouver, British Columbia, Canada), IBMX (100 μM, R&D system, United States).
From day 4, the IMDM medium was gradually replaced with increasing concentrations of N2 medium (IMDM, 1% penicillin/streptomycin, 2 mM L-glutamine, N2 supplement 1:100, B27 w/o vitamin A (B27-) 1:50). At day 11, cells were detached and replated (1.3 × 105cell/cm2) on polyornithine/laminin coated plates in Neurobasal medium (Thermo Fisher Scientific) supplemented with N2, B27 1:50. (Figure 1).
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6

Differentiation of ES Cells into Spinal Motor Neurons

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ES cells were differentiated into spinal motor neurons as previously described.33 ,34 (link) Briefly, Hb9::GFP mouse embryonic stem cells were plated into ES cell medium (ES DMEM, ES FBS, glutamine, non-essential amino acids, nucleosides, 2-mercaptoethanol, LIF (Life Technologies)) at approximately 5 × 105 cells per gelatinized T25 flask. After 24 hours the media was replaced, and on day 2 of culture, ES cells were trypsinized and placed in suspension culture in motor neuron media (Advanced-DMEM/F12, Neurobasal, and Knockout Serum Replacement (Life Technologies)) at 5 × 105 cells per untreated 10 cm tissue culture dish. In suspension culture, the cells aggregated into embryoid bodies (EBs). Two days after initial seeding the EBs were split 1 : 4 and induced into motor neurons with 1 μM retinoic acid (RA) (Sigma) and 1 mM smoothened agonist (SAG) (Millipore). After 3 days of exposure to RA and SAG, the EBs displayed strong expression of Hb9 : GFP transgene.
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7

Differentiation of Neurons from iNPCs

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Neurons were differentiated from iNPC’s as previously described40 . Briefly, iNPCs are plated in a 6-well plate and cultured for 2 days in DMEM/F-12 medium with Glutamax supplemented with 1% NEAA, 2% B27 (Gibco) and 2.5 µM of DAPT (Tocris). On day 3, DAPT is removed and the medium is supplemented with 1 µM smoothened agonist (SAG; Millipore) and FGF8 (75 ng/ml; Peprotech) for additional 10 days. Neurons are replated at this stage. Subsequently SAG and FGF8 are withdrawn and replaced with BDNF (30 ng/ml; Peprotech), GDNF (30 ng/ml; Peprotech), TGF-b3 (2 mM; Peprotech) and dcAMP (2 mM, Sigma) for 15 days.
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8

Astrocytoma and Motor Neuron Culture

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1321N1 astrocytoma cells were cultured in DMEM (Sigma-Aldrich) supplemented with 10% FBS (Gibco) and 5 U ml−1 Penstrep (Lonza). Hb9-GFP mouse stem cells were cultured as described (Wichterle et al, 2002 (link)) and differentiated into motor neurons with 2 μM retinoic acid (Sigma-Aldrich) and 1 μM Smoothened Agonist (SAG) (Millipore) for 5 d. Embryoid bodies were then dissociated with papain. All cells were maintained in a 37°C incubator with 5% CO2.
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9

Differentiating Embryonic Stem Cells into Motor Neurons

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Mouse embryonic stem cells expressing GFP under the motor neuron (MN)-specific promoter HB9 (HBG3 cells; gift from Tom Jessell) were cultured on primary mouse embryonic fibroblasts (Millipore). For differentiation into MNs, cells were treated with trypsin and resuspended in DFK10 culture medium consisting of knockout DMEM/F12, 10% knockout serum replacement, 1% N2, 0.5% L-glutamine, 0.5% glucose (30% in water), and 0.0016% 2-mercaptoethanol. The cells were plated on non-adherent Petri dishes to allow formation of embryoid bodies. After 1 d of recovery, 2μM retinoic acid (Sigma) and 1μM Smoothened Agonist (SAG) (Millipore) were added to the medium every day for 5 days. Embryoid bodies were then dissociated with papain and sorted using the FACSAria™ III (BD Biosciences).
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10

Generation of GABAergic Interneurons from hiPSCs

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hiPSCs were differentiated into MGE progenitors as previously reported with modifications26 (link)–28 (link). On day 1 through day 8 of differentiation, MGE spheres were grown in suspension in KSR medium supplemented with Rock Inhibitor (RI, Tocris Bioscience), the TGF-ß receptor inhibitor SB431542 (SB, Stemgent), the Wnt pathway inhibitor Wnt Antagonist II (IWP-II, Millipore), the Hedgehog pathway activator Smoothened Agonist (SAG, Millipore), and the bone morphogenetic protein receptor inhibitor LDN-193189 (LDN, Stemgent). On day 8, MGE spheres were transferred to KSR media supplemented with FGF-8 (PeproTech), IWP-II, SAG, and LDN. On day 21, MGE-progenitors were dissociated with Accutase and plated on culture plates coated with PLL overnight at 37°C and Laminin for ≥ 1hour at 37°C in neural induction medium containing DMEM/F12 and Neurobasal Medium (1:1, Thermo Fisher), N2 Supplement, B27 Supplement (Life Technologies), NEAA, Glutamax, and penicillin/streptomycin supplemented with Brain-Derived Neurotrophic Factor (BDNF, PeproTech), Glial-Derived Neurotrophic Factor (GDNF, PeproTech), the γ secretase inhibitor DAPT (Tocris), the MEK/ERK pathway inhibitory SU5402 (STEMCELL Technologies), and the MEK inhibitor PD0325901 (Tocris). From day 28 on, maturing GABAergic inhibitory interneurons were cultured in neural induction medium containing BDNF and GDNF for up to 5 weeks.
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