The largest database of trusted experimental protocols

Crisprv2pspcas9 bb 2a puro px459 v2

Manufactured by Addgene

CrisprV2pSpCas9(BB)-2A-Puro (PX459) V2.0 is a plasmid vector designed for CRISPR/Cas9-mediated genome editing. It expresses the Streptococcus pyogenes Cas9 (SpCas9) protein and a puromycin resistance gene, allowing for selection of transfected cells.

Automatically generated - may contain errors

3 protocols using crisprv2pspcas9 bb 2a puro px459 v2

1

CRISPR-Mediated TAOK2 Knockout in HEK293T

Check if the same lab product or an alternative is used in the 5 most similar protocols
Two independent TAOK2 knockout cell lines were generated using CRISPR/Cas9 genome editing in HEK293T cells. Four guides were designed using Synthego guide design tool (https://www.synthego.com) to target coding exon 2. Guides were cloned into plasmid CrisprV2pSpCas9(BB)-2A-Puro (PX459) V2.0 (Addgene Plasmid #62988) which has Puromycin resistance. Cells were passaged in single cell suspension and plated at 50% confluence. Cultures were then transfected with lipofectamine 2000 reagent (Invitrogen 11668–030) and 2mg of each of the 2 guides used per KO line. Cells were then selected with Puromycin for 2 days to select for transfected cells. Non-Homology End Joining (NHEJ) repair created a deletion around the gRNA cutting site. Edited cells were then passaged into single cells and expanded into single cell colonies. Genomic DNA was extracted and the region around the cutting site was PCR amplified to send for sequencing. Knockout of the gene TAOK2 was confirmed by Sanger sequencing analysis, and absence of encoded protein was validated using western blot.
+ Open protocol
+ Expand
2

CRISPR-Mediated TAOK2 Knockout in HEK293T

Check if the same lab product or an alternative is used in the 5 most similar protocols
Two independent TAOK2 knockout cell lines were generated using CRISPR/Cas9 genome editing in HEK293T cells. Four guides were designed using Synthego guide design tool (https://www.synthego.com) to target coding exon 2. Guides were cloned into plasmid CrisprV2pSpCas9(BB)-2A-Puro (PX459) V2.0 (Addgene Plasmid #62988) which has Puromycin resistance. Cells were passaged in single cell suspension and plated at 50% confluence. Cultures were then transfected with lipofectamine 2000 reagent (Invitrogen 11668–030) and 2mg of each of the 2 guides used per KO line. Cells were then selected with Puromycin for 2 days to select for transfected cells. Non-Homology End Joining (NHEJ) repair created a deletion around the gRNA cutting site. Edited cells were then passaged into single cells and expanded into single cell colonies. Genomic DNA was extracted and the region around the cutting site was PCR amplified to send for sequencing. Knockout of the gene TAOK2 was confirmed by Sanger sequencing analysis, and absence of encoded protein was validated using western blot.
+ Open protocol
+ Expand
3

Generating TAOK2 Constructs and Knockouts

Check if the same lab product or an alternative is used in the 5 most similar protocols
Full length human TAOK2 was PCR amplified from pCMV-Sp6-TAOK2 plasmid described previously (Ultanir et al., 2014) , and inserted in vector sfGFP-C1 (Addgene #54579) using restriction sites HindIII and MfeI. Domain dissection mutants were subcloned from sfGFP-TAOK2 using restriction enzymes HindIII and MfeI (New England Biolabs). All resultant plasmids were verified by sequencing. GST-TAOK2-(1187 -1235) was subcloned from the sfGFP-TAOK2 into the pGEX4T1 vector using sites SalI and NotI. TAOK2 knockout cell line was generated using CRISPR/Cas9 genome editing in HEK293T cells. Four independent guides were designed using Synthego guide design tool (https://www.synthego.com) to target coding exon 2. Two plasmids were made by adding their respective guides into CrisprV2pSpCas9(BB)-2A-Puro (PX459) V2.0 (Addgene Plasmid #62988). Cells were passaged in single cell suspension and plated at 50% confluence. Cultures were then transfected with lipofectamine 2000 reagent (Invitrogen 11668-030) and 2mg of each respective plasmid. Non-Homology End Joining (NHEJ) repair created a deletion around the gRNA cutting site. Cells were selected with Puromycin for 2 days. Genomic DNA was extracted and the region around the cutting site was PCR amplified. Knockout of the gene TAOK2 was confirmed by Sanger sequencing analysis, and absence of encoded protein was validated using western blot.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!