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15 protocols using af6456

1

Protein Expression Analysis in Pituitary Tumors

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The protein expressions of TOPK (16110-1-AP, Proteintech), p38 MAPK (AF6456, Affinity), PRL (DF6506, Affinity), Bax (50599-2-Ig, Proteintech) and Bcl-2 (12789-1-AP, Proteintech) in pituitary tumor cells and pituitary tissues were determined by Western Blot assay. The tissue samples or cell samples were treated with RIPA lysate to extract total protein, and protein concentration was determined by BCA method. The proteins were separated by SDS-PAGE and transferred to polyvinylidenedifluoride membranes. The membranes were blocked with 5% skim milk at room temperature for 1 h, then incubated overnight in the primary antibody at 4°C, and incubated in the secondary antibody for 1 h. After TBST elution, electrochemiluminescence (ECL) was used for exposure, and the gray values of protein bands were analyzed by Image J software.
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Western Blot Analysis of MAPK Signaling

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PASMCs were lysed in radio‐Immunoprecipitation assay (RIPA) buffer containing phosphatase and protease inhibitors (ST505; Beyotime) on ice and centrifuged at 12,000 rpm for 20 min at 4°C. Protein concentrations were determined using a BCA assay (Beyotime) and equal amounts of protein (40 μg each lane) were subjected to SDS‐PAGE and then transferred onto polyvinylidene fluoride membranes (Millipore). Membranes were blocked with 5% fat‐free milk, and incubated overnight at 4°C with primary antibodies including anti‐MKK3 (AF6327; Affinity Biosciences), anti‐MKK6 (AF7820; Affinity Biosciences), anti‐P‐38 (AF6456; Affinity Biosciences), and anti‐glyceraldehyde‐3‐phosphate dehydrogenase (GAPDH) (ab181602; Abcam). After washing with PBST five times for 5 min each, the membranes were incubated with secondary antibodies for 1 h at room temperature. Target bands were quantified using a Tanon‐5200 Image Analyzer.
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3

Protein Expression Analysis Protocol

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N-acetyl-L-cysteine (A105420) was purchased from Aladdin (Shanghai, China). β-actin (1:1000, 3700), caspase-3 (1:1000, 9662), cleaved caspase-3 (1:1000, 9664), cleaved PARP (1:1000, 5625), Bcl-2 (1:1000, 5625), SAPK/JNK (1:1000, 9252), phospho-SAPK/JNK (1:1000, 4668), anti-rabbit IgG (1:4000, 7074S), anti-mouse IgG (1:4000, 7076S), Bak (1:1000, 12105), and cytochrome C (1:1000, 4280) were obtained from Cell Signaling Technology (Boston, Massachusetts, USA). The p38 MAPK (1:1000, AF6456), phospho-p38 MAPK (1:1000, AF3455), ERK1/2 (1:1000, AF0155), and phospho-ERK1/2 (1:1000, AF1014) were obtained from Affinity Biosciences (Pottstown, PA, USA).
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4

Protein Expression Analysis in Aortic Tissues

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Total proteins were extracted from the thoracic aorta tissues using the radioimmunoprecipitation buffer lysis buffer (Roche, Mannheim, Germany). Total protein concentration was measured using the BCA Protein Assay Kit (Pierce, Rockford, USA) according to manufacturer's instructions. The same amount of total proteins were injected into the sample holes of 10% sodium dodecyl sulfonate- (SDS-) polyacrylamide gel electrophoresis (PAGE) and then electrophoretically transferred to polyvinylidene fluoride (PVDF) membranes (Millipore, Billerica, MA, USA). After being blocked with 5% skim milk for 1 h, the membranes were incubated overnight at 4°C with anti-p38 (Affinity Bioscience, USA; AF6456, 1 : 1000), anti-p-p38 (Affinity Bioscience, USA; AF4001, 1 : 1000), anti-JNK (Abcam; ab179461, 1 : 1000), anti-p-JNK, (Abcam; ab124956, 1 : 5000), anti-ERK (Affinity Bioscience, USA; AF0155, 1 : 5000), anti-p-ERK (Affinity Bioscience, USA; AF1015, 1 : 2000), and anti-β-actin (Abcam; ab8226, 1 : 5000). The membranes were then incubated with secondary antibodies, including goat anti-mouse IgG-H&L (HRP) (Abcam; ab205719, 1 : 10000) and goat anti-rabbit IgG-H&L (HRP) (Abcam; ab205718, 1 : 10000). Protein signals were assessed using enhanced chemiluminescence (ECL) western blot detection system (Millipore, Billerica, MA, USA) and densitometric analysis.
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5

Articular Cartilage Protein Analysis

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Articular cartilage (0.1 g) was weighed and lysed for 30 min on ice with RIPA lysis buffer containing PMSF (R0010). The supernatant was obtained by centrifugation for 20 min at 4 ℃ and 12,000 rpm, that is, the total protein. The protein concentration was measured by a BCA protein assay kit (PC0020, Solarbio). Equal amounts of protein samples were separated by SDS‒PAGE and then transferred to PVDF membranes (IPVH00010, Millipore). The membrane was blocked with 5% skim milk at room temperature for 1 h and then incubated with antibodies against p38MAPK (AF6456, Affinity), p-p38MAPK (AF4001, Affinity), MMP1 (AF0209, Affinity), MMP13 (AF5355, Affinity) and beta actin (AF7018, Affinity) overnight at 4 °C. Then, the membrane was incubated with the secondary antibody at room temperature for 2 h. The protein bands were detected by ECL reagent (WBKLS0100, Millipore) and observed by a Bio-Rad chemiluminescence imaging system (Chemidoc XRS+, Bio-Rad). ImageJ software was used to quantify the scanned image.
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6

Protein Quantification and Western Blotting Analysis

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A BCA Protein Assay Kit (Beyotime, Beijing, China, #E-BC-K318-M) was employed to analyze the total protein concentration in the brain tissue samples. Sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) was conducted at 80 V for 1 hour. Proteins were transferred to the membrane using Trans-Blot®Turbo™ (Bio-Rad, USA). The total protein was incubated with rabbit antibodies against p-P38 (1:1000; 43 KD, AFFINITY, #AF3455, Rabbit), P38 (1:3000; 43 KD, AFFINITY, #AF6456, Rabbit, Jiangsu, China), p-IκBα (1:1000; 39 KD, AFFINITY, #AF2002, Rabbit, Jiangsu, China), Caspase1 (1:1000; 45 KD, AFFINITY, #AF5418, Rabbit, Jiangsu, China), COX2 (1:1000; 72 KD, AFFINITY, #AF7003, Rabbit, Jiangsu, China), iNOS (1:500; 130 KD, AFFINITY, #AF0199, Rabbit, Jiangsu, China) and α-Tubulin (1:5000; ProMab, #PM210797, Rabbit) at 4°C overnight. Then, the blots were incubated with rabbit IgG (1:80000; AFFINITY, #S0001, Rabbit, Jiangsu, China) at room temperature for 2 h. Image-Pro Plus software was used to analyze the positive signals.
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7

Analysis of Uterine Protein Expression

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After treatment, the uterine tissues (myometrium and endometrium) were lysed with RIPA buffer. After isolation by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), the proteins were transferred to polyvinylidene difluoride (PVDF) membranes. After blocking by 5% defatted milk powder, the membranes were incubated with the primary antibodies against tubulin alpha antibody (AF7010, 1 : 5000, Affinity, USA), ERK1/2 antibody (AF0155, 1 : 1000, Affinity, USA), phospho-ERK1/2 (Thr202/Tyr204) antibody (ab92946, 1 : 500, Affinity, USA), JNK1/2/3 antibody (AF6318, 1 : 500, Affinity, USA), phospho-ERK1/2 (Tyr204) antibody (AF1014, 1 : 500, Affinity, USA), p38 MAPK antibody (AF6456, 1 : 500, Affinity, USA), and phospho-p38 MAPK (Thr180/Tyr182) antibody (AF4001, 1 : 500, Affinity, USA) at 4°C for 24 h. After washing with PBS, the membranes were incubated with the secondary antibodies at room temperature for another 2 h. Lastly, the signals of protein bands were developed with enhanced chemiluminescence (ECL).
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8

Western Blot Analysis of Heart Tissue Proteins

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Protein lysates were harvested from heart tissues. The proteins were separated using sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto polyvinylidene difluoride (PVDF, MilliporeSigma, Burlington, MA, USA) membranes. After being blocked with 5% non-at milk, the membranes were incubated with the following primary antibodies: anti-IFIT3 (1:1,000; A3924, ABclonal), anti-JNK (1:1,000; AF6318, Affinity, Changzhou, China), anti-p-JNK (1:1,000; AF3318, Affinity), p38 (1:1,000; AF6456, Affinity), p-p38 (1:1,000; AF4001, Affinity), ERK (1:1,000; AF0155, Affinity), p-ERK (1:1,000; AF1015, Affinity), collagen I (1:1,000; AF0134, Affinity), collagen III (1:1,000; AF0136, Affinity), α-SMA (1:1,000; AF1032, Affinity), and anti-β-actin (1:1,000; sc-47778, Santa Cruz Biotechnology, Dallas, TX, USA) at 4°C overnight. Next, the membranes were incubated with horseradish peroxidase (HRP) goat anti-rabbit IgG and HRP goat anti-mouse IgG (1:5,000; A0208/A0216, Beyotime) at 37°C for 45 min. Finally, the protein bands were visualized by using enhanced chemiluminescence liquid (ECL, Beyotime), and the OD values were analyzed by a Gel-Pro Analyzer (Liuyi, Beijing, China).
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9

Protein Expression Analysis by Western Blot

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Total proteins were extracted using radioimmunoprecipitation assay lysis buffer containing proteinase inhibitors (No. 04693159001, Roche Diagnostics, Switzerland), and phosphatase inhibitors (No. 04906845001, Roche), separated by sodium dodecyl-sulfate polyacrylamide gel electrophoresis (SDS-PAGE), transferred to polyvinylidene difluoride (PVDF) membranes, and analyzed by immunoblotting. Primary antibodies against the following proteins were used: TH (66334-1-Ig, Proteintech), protein kinase A (PKA) (AF5450, Affinity (China)), p-HSL (AF8026, Affinity), hormone-sensitive lipase (HSL) (AF6403, Affinity), p-p38 mitogen-activated protein kinase (MAPK) (AF4001, Affinity), p38 MAPK (AF6456, Affinity), PGC1α (AF5395, Affinity), UCP1 (NB100-2828, Novus Biologicals), and GAPDH (60004-1-Ig, Proteintech). The antibodies were diluted 1:1,000 with PBS. The membranes were then incubated with a peroxidase-conjugated secondary antibody (BS13278, Bioworld (China); SA00001-1, Proteintech; SA00001-3, Proteintech), and antibody-specific signals were detected by enhanced chemiluminescence and quantified using the Automatic Chemiluminescence Imaging System (Complex 2000; Nanjing PuoAoXin Biotechnology, China).
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10

Western Blot Analysis of Cellular Proteins

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ARPE‐19 cells were lysed in a lysis buffer to extract total protein, and the protein concentration was measured by a bicinchoninic acid assay kit (Beyotime, Shanghai, China). Samples were loaded and separated in 10% Bis‐Tris‐polyacrylamide electrophoresis gels. Then, the proteins were transferred to PVDF membranes, which were blocked with 5% nonfat milk followed by incubation with primary antibodies at 4 °C overnight. After incubation with the secondary antibody for 1 h, the Western blot signals were detected by ECL Plus reagents. ImageJ was used to analyze the protein bands. Primary antibodies against Occludin (1:800, Cat No. 17590‐1‐AP), TLR4 (1:800, Cat No. 66350‐1‐Ig), p65 (1:500, Cat No. 10745‐1‐AP), JNK (1:500, Cat No. 24164‐1‐AP), p‐JNK (1:500, Cat No. 80024‐1‐RR) and MYD88 (1:800, Cat No: 23230‐1‐AP) were purchased from Proteintech. Antibodies against p‐p65 (1:1000, AF2006), GADD45G (1:1000, A10286), p‐p38 (1:1000, AF4001), p38 (1:1000, AF6456), GAPDH (1:3000, AF7021), β‐actin (1:3000, AF7018) and OR11H1 (1:1000, DF5186) were purchased from Affinity.
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