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14 protocols using biotinylated goat anti rabbit igg

1

Evaluating hSETD1A Expression in TNBC

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IHC was conducted to evaluate the hSETD1A expression in tissue samples acquired from 159 TNBC cases. Briefly, tissue samples were fixed in 10% buffered formalin and embedded in paraffin for a routine histologic examination. Tissue sections were cut from a paraffin block of each specimen and applied to slides for IHC. Slides were stained with hematoxylin and eosin with additional immunostains for ER, PR, HER2, and hSETD1A. Primary antibodies (rabbit monoclonal antibody; 1:100 dilution; ab70378, Abcam, MA) were used to evaluate hSETD1A. Staining was performed using goat anti-rabbit biotinylated IgG (Abcam, MA) and incubating in phosphate-buffered saline containing 1% bovine serum albumin for 30 min at ambient temperature, followed by incubation with the ABC reagent (Vectorlabs, CA) for an additional 30 minutes. Immunostaining was visualized using 3,30-diaminobenzidine (Sigma-Aldrich, Darmstadt, Germany).
Two pathologists evaluated all histologic and IHC tumor slides separately for nuclear grade. HER2 status was evaluated using IHC, and ER and PR were considered positive if there were at least 1% positive invasive tumor nuclei in the sample. HSETD1A was considered positive if 10% or more of tumor cells showed positive membrane expression (see Figure 1).
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2

Immunohistochemical Staining of NeuN

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Sections were air-dried overnight, followed by 20 min of fixation in methanol (Sigma-Aldrich) at −20°C. Endogenous peroxidase activity was quenched in cold 10% hydrogen peroxide-methanol solution for 10 min. Sections were blocked with 5% normal goat serum (s-1000, Vector Laboratories) in 0.3% TritonX TBS, incubated with rabbit Anti-NeuN antibody (1:1,500; Abcam ab177487) for 1 h at RT, and with Goat Anti-Rabbit biotinylated IgG (1:250; Abcam ab207995) for 1 h at RT. Slides were washed 3 times with TBS, incubated in avidin-biotin horseradish peroxidase solution (ABC Kit pk-4000, Vector Laboratories) for 30 min and the reaction product visualised with diaminobenzidine (DAB Kit sk-4100, Vector Laboratories). The sections were dehydrated in a series of alcohols, cleared with Histochoice and coverslipped with Permount.
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3

Immunohistochemical Evaluation of Apoptosis Markers

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Mounted sections containing the substantia nigra were dewaxed and hydrated, and antigen retrieval was performed using a microwave. The slides were then incubated with 3% hydrogen peroxide, normal goat serum, and polyclonal rabbit antibodies against Bax, Bcl-2, tyrosine hydroxylase (TH), and phosphorylated (p)-ERK1/2 (all 1:1,000; Cell Signaling Technology, Danvers, MA, USA), at 4°C overnight. The sections were then incubated with biotinylated goat anti-rabbit IgG (1:1,000; Abcam, Cambridge, UK) at 37°C for 30 minutes and streptavidin/horseradish peroxidase solution at 37°C for 30 minutes. Proteins were visualized using 3,3′-diaminobenzidine, counterstained with hematoxylin, dehydrated, permeabilized and mounted. Immunopositive cells appeared as brownish-yellow granules in the cytoplasm under a light microscope (Nikon E100, Shanghai, China). Ten high-power fields were randomly selected for quantification, and the relative expression of Bax, TH, Bcl-2 and p-ERK1/2 was calculated from pixel dots (Hu and Chen, 2015), with one pixel dot equal to 0.095 μm2.
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4

Immunohistochemical Detection of hERG1 in Cells

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To remove paraffin, slides and coverslips with adherent cells were baked on a rack in a dry oven for 2 h at 60°C. The slides and coverslips were then immersed in xylene (Zhongshan Biotechnology) for 3 min twice, hydrated with consecutive incubations in 100%, 95%, 70% and then 50% ethanol (Zhongshan Biotechnology) and rinsed for 5 min in cold tap water. The sections were dewaxed, treated to inhibit endogenous peroxidases, exposed to EDTA at 100°C (1 mM, pH 8.0) to retrieve antigens and then incubated with anti-hERG1 antibody (1:500, Abcam) at 4°C overnight. The next day, the samples were rinsed with PBS and then incubated at room temperature for 1 h with biotinylated goat anti-rabbit IgG (Abcam). The tissues were treated with avidin biotin complex (ABC) (Zhongshan Biotechnology) and diaminobenzamidine (DAB) (Zhongshan Biotechnology) according to manufacturer's instructions, and then counterstained with haematoxylin. Imaging was performed using a confocal microscope (Olympus, Japan).
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5

Immunofluorescence Characterization of iPSC-Derived Mesenchymal Stem Cells

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IPSC-MSCs were plated on glass coverslips in 24-well plates at 5×105/well. The following day, cells were serum starved overnight. iPSC-MSCs were fixed in 4% paraformaldehyde, permeabilized with 0.5% Triton X-100, and blocked with 0.5% BSA prior to antibody addition. Indirect immunofluorescence experiments were performed using the KGFR, FGFR, CD31, and K10 monoclonal antibodies (Abcam) overnight at 4°C. Coverslips were then incubated for 60 minutes at room temperature with biotinylated goat anti-rabbit IgG (Abcam) diluted 1:250 in 0.5% BSA. Nuclei were counterstained with 300 nM 4',6-diamidino-2-phenylindole (DAPI, Suobaolai, Beijing). The stained cells were observed with a confocal laser scanning microscope with 100 times magnification (CLSM Nikon, A1),
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6

Immunohistochemical Detection of Neuron-Specific Enolase

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Paraffin-embedded sections were prepared (Li et al., 2009), dewaxed, and antigen retrieval was performed using citrate buffer solution (0.01 M, pH 6.0). The sections were incubated with rabbit anti-human neuron-specific enolase monoclonal antibody (1:1,000; Abcam) overnight at 4°C. They were rinsed with 0.01 M phosphate buffer solution, incubated with biotinylated goat anti-rabbit IgG (1:1,000; Abcam) at room temperature for 30 minutes, and incubated with peroxidase-labeled streptavidin for 15 minutes before mounting. The slides were viewed under a light microscope and stained cells were counted using Image-Pro Plus 6.0 software.
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7

Histological Analysis of Tumor Xenografts

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Mice were sacrificed by CO2 suffocation. Tumors were extracted and washed using normal saline solution. The samples were then instantly frozen in liquid nitrogen and sectioned. All tissues were stained with hematoxylin and eosin for the histologic evaluation. Light microscopy images were acquired with an Olympus IX51 microscope.
Immunohistochemical analysis was performed on xenografts and GEMM tissue samples as described previously (14 (link), 21 (link)). Briefly, unstained 5-µm sections were fixed by standard techniques before antigen retrieval in ethylenediaminetetraacetic acid buffer. The samples were then incubated by the 1:50 dilution of antiperiostin rabbit polyclonal IgG (ab14041; Abcam) overnight at 4°C. The sections were washed in Tris-buffered saline and polysorbate 20 mixture and incubated with biotinylated goat antirabbit IgG (Abcam) for 1 h. The staining was developed by incubation in liquid 3,3′-diaminobenzidine (Dako) for 1 min. Slides were washed in distillated water and counterstained with hematoxylin (Richard-Allan Scientific) and dehydrated before mounting. Two esophageal cancer tissue arrays (ES2081 and ES2001; US Biomax) were stained for periostin expression with slight modification of the technique described above. The scoring for periostin expression was done as previously described (13 (link)).
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8

Immunohistochemistry of IGF1R in Femur

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Following our previously reported methods,(28 ) femurs were cleaned of adherent tissue, fixed overnight at 4 °C in 4% paraformaldehyde in PBS, rinsed in PBS, dehydrated through an ethanol series, cleared in xylene, embedded in paraffin, and cut into 5-μm sections. Deparaffinized and rehydrated sections were incubated with 3% hydrogen peroxide in methanol to block endogenous peroxidase and with protein blocker (Abcam, Cambridge, MA, USA) to block the nonspecific binding of antibodies. The sections were then reacted with rabbit IGF1R antibody (1:200) (Aviva Systems Biology, San Diego, CA, USA) at 4 °C overnight. After washing with PBS, the sections were incubated with biotinylated goat anti-rabbit IgG (Abcam), then streptavidin peroxidase (Abcam), and visualized by 3,3′-diaminobenzidine.
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9

Immunohistochemical Analysis of MAP2 Expression

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Immunohistochemistry was carried out as described previously (Zan et al. 2014 (link)). After being blocked, coronal sections (n=6 rats/group) were incubated with rabbit anti-MAP2 (a mature neuronal marker, 1:1000, Abcam) at 4°C overnight and then with biotinylated goat anti-rabbit IgG (1:1000, Abcam) for 1 h at room temperature. The immunoreactions were visualized with diaminobenzidine-H2O2 solution. Control sections were processed without the primary antibody and showed no positive signals. MAP2-positive cells were counted around the lesion under a 40× objective from 15 randomly selected locations per rat (5 fields per section × 3 sections per rat). Quantifications were averaged and expressed as positive cells per field. Sections were selected and analyzed by an investigator blinded to the experimental cohort.
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10

Hydrogel-Cartilage Composite Histological Analysis

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Hydrogel-cartilage composites were fixed in 10% formalin and, then, embedded in paraffin. The paraffin blocks were sectioned in 5 μm thick slices which were later deparaffinized and stained for different ECM components. GAG molecules were visualized by staining deparaffinized sections with safranin-O. Type I and II collagens were stained using an immunohistochemical method. Briefly, slices were first immersed in a series of solutions including citrate buffer (99 °C), hydrogen peroxide (0.3%), and goat serum (1%) based blocking buffer. The samples were then incubated overnight with rabbit anti-human collagen I or II antibodies (Abcam, Cambridge, MA, USA) and sequentially with biotinylated goat anti-rabbit IgG (Abcam) and streptavidin-conjugated horseradish-peroxidase complex (Vector Labs, Burlingame, CA, USA), followed by the addition of diaminobenzidine chromogen reagent. The negative staining control was established by incubating sections derived from the 2.5% agarose constructs with normal rabbit serum in lieu of primary antibodies, and no nonspecific staining was observed (images are available upon request). Color images were captured under a light microscope (Nikon Eclipse Ti, Tokyo, Japan).
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