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4 protocols using anti lmnb1

1

Characterization of Cellular Response to TNF-α

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HEK293T cells (ATCC, CRL-3216™). A549 cells (SCSP-503) and THP-1 cells (TCHu 57) were purchased from the National Collection of Authenticated Cell Cultures (Shanghai, China). Sendai virus (SeV) was kindly provided by Prof. Yanyi Wang (Wuhan Institute of Virology, CAS) and propagated in SPF chicken embryonated eggs. Lipo293™ Transfection Reagent (Beyotime Biotechnology, C0521), Lipofectamine 2000 (Invitrogen, 11,668,019), dual-specific luciferase assay kits (Promega, E1980), human recombinant TNFα (R&D Systems, 210-TA-020/CF), BAY 11–7082 (MCE, HY-13,453), mouse anti-Flag (Sigma, F3165), rabbit anti-Flag (Proteintech, 20,543–1-AP), anti-β-actin (Cell Signaling Technology, # 3700S), anti-GAPDH (HuaBio, #R1210–1), anti-LMNB1(Proteintech, 2987–1-AP), anti-HA (Origene, TA100012), anti-TNF-α (Proteintech, 60,291–1-Ig), anti-phospho-NF-κB p65(Cell Signaling Technology, #3033S), anti-phospho-IκBα (Cell Signaling Technology, #9246S), anti-phospho-IKKα/β (Cell Signaling Technology, # 2697S), anti-IKK-β (Proteintech, 15,649–1-AP) anti-IκBα (Santa Cruz, sc-1643), anti-p65 (Santa Cruz, sc-8008), donkey anti-mouse IgG-Cy3 (Absin, abs20015) and goat anti-Rabbit IgG-FITC (Absin, abs20004ss) were purchased from the indicated companies.
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2

Angiogenesis Inhibition Assay Protocol

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Ethanol, fibrinogen, aprotinin, thrombin and Pyrrolidine dithiocarbamate (PDTC) were purchased from Sigma Chemical Co. (St. Louis, MO). Cyanidin-3-glucoside (C3G) was prepared as previously described [38 (link)]. Anti-MCP1 and anti-VEGF antibodies were obtained from Abcam (Cambridge, MA). Anti-NF-κB p65, IκBα, p-IκBα and anti-LMNB1 antibodies were purchased from Protein Tech Group (Chicago, IL, USA). Anti-β-actin was obtained from Cell signaling Technology (Danvers, MA). Anti-CD31 antibody was obtained from BD Pharmingen (San Diego, CA). Reactive oxygen species detection reagents were obtained from Invitrogen Molecular Probes (Eugene, OR). MTT assay kit was purchased from Roche Molecular Biochemicals (Indianapolis, IN). Matrigel Invasion Chambers were purchased from BD Biosciences (Bedford, MA). Cytodex 3 beads were purchased from Amersham Pharmacia Biotech (Piscataway, NJ).
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3

Protein Expression Analysis by Western Blot

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The different samples of cells were lysed in urea buffer containing 2 M Thiourea, 4%CHAPS, 40 mM Tris-Base, 40 mM DTT, 2% Pharmalyte and sonicated to shear DNA. Protein expression was detected by ECL and visualized by Image studio system (ECL, LI-COR, Lincoln, Georgia, USA). Image J software (National Institutes of Health, Bethesda, MD, USA) was used to quantify protein expression. The sources and dilution ratio of the primary antibodies are shown as follows: anti-iASPP (Sigma, #A4605, 1:2000), anti-LMNB1 (Proteintech, #12987-1-AP, 1:2000), anti-Keap1 (Proteintech, #10503-2-AP, 1:2000), anti-Bcl2 (Proteintech, #12489-1-AP, 1:2000), anti-GAPDH (Proteintech, #10494-1-AP, 1:2000), anti-α-tubulin (Proteintech, #11224-1-AP, 1:2000), anti-Histone-H3.1 (Proteintech, #17168-1-AP, 1:2000), anti-p53 (Proteintech, #10442-1-AP, 1:2000), anti-p21 (Proteintech, #10355-1-AP, 1:500) and anti-Nrf2 (Proteintech, #16396-1-AP, 1:1000).
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4

Western Blot Protein Quantification

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Total protein was extracted from cultured cells or tissues using radioimmunoprecipitation assay (RIPA) buffer containing protease inhibitors and quantified using the BCA Protein Assay Kit (Beyotime, China). The protein samples were diluted with the appropriate amount of loading buffer and PBS to 2 μg/l, and denatured by heating at 95 °C for 15 min. The samples were resolved by 10% or 12% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to polyvinylidene fluoride (PVDF) membranes (Amersham, Munich, Germany). Following overnight incubation with rabbit anti-FBL (1:2000 Magna, Proteintech, Rosemont, IL, USA), rabbit anti-PARP1 (1:2000 Magneto, Proteintech), rabbit anti-PARP4 (1:2000, Bioss, Woburn, MA, USA), anti-ITPR3 (1:2000, LSBio), anti-LMNB1 (1:10,000, Proteintech), anti-Vinculin (1:10,000, Proteintech), anti-GAPDH (1:5000, Proteintech) and anti-α-tubulin (TUBA1B/1C) (1:2000, Proteintech) antibodies at 4 ℃, the membranes were washed thrice with 1% Tris-buffered saline-Tween20 (TBST) buffer for 10 min each time. The membranes were then incubated with the secondary antibody for 2 h, and washed again with 1% TBST buffer for 10 min. The bands were visualized using an enhanced chemiluminescence system (NCM Biotech, Suzhou, China), and the protein levels were quantified using grayscale values.
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