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Biosciences accuri c6

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The BD Biosciences Accuri C6 is a compact and user-friendly flow cytometer designed for versatile analytical applications. It offers reliable performance and intuitive software for efficient data acquisition and analysis.

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4 protocols using biosciences accuri c6

1

Evaluating Lysosomal Changes in NPC

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We evaluated the effects of cyclodextrins and miglustat on lysosomal changes as NPC manifestations using LysoTracker® Green DND-26. WT and Npc1-null CHO cells were seeded at 1 x 105 cells /well in 12-well plates and incubated at 37 °C for 24 h to allow cell adhesion. The cells were then treated with or without cyclodextrins and miglustat for 24 h. We confirmed that 8–24 h of treatment with HP-β-CD exerted sufficient and significant attenuating effects against NPC in our preliminary results (data not shown). The concentration ranges of cyclodextrins and miglustat were based on our previous studies [23 (link),28 (link)]. The cells were washed with phosphate-buffered saline and stained with 50 nM LysoTracker® dissolved in DMEM/F12 (1:1) with 10% FBS and antibiotics for 15 min at 37 °C. Then, the cells were collected by trypsinization, and LysoTracker® fluorescence was measured by a flow cytometer (BD Biosciences Accuri™ C6, Becton Dickinson Biosciences, Franklin Lakes, NJ, USA) using a 488 nm laser. Finally, using a 530 ± 30 nm filter, fluorescence was detected in the FL1 channel. Data from 10,000 cells were collected and represented as the mean fluorescence intensity using BD Accuri C6 software (Becton Dickinson Biosciences). We performed three independent experiments (N = 3) for each group and show the mean value and standard error of the mean (SEM) of the three values.
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2

Apoptosis Analysis of MFAP2-Silenced Cells

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BCPAP and TPC-1 cells were cultivated in 6-well plate and transfected with MFAP2-siRNA or negative control siRNA for 48 h, all the cells were harvested and double-stained with FITC-Annexin V and PI with Annexin V-fluorescein isothiocyanate (FITC) apoptosis kit (#556547; Becton, Dickinson and Company, Franklin Lakes, NJ, USA) based on the manufacturer’s manual. Flow cytometry (BD Biosciences Accuri C6; Becton, Dickinson and Company) was used to examine cell apoptosis and Flowjo software (Flowjo, Ashland, OR, USA) was used to analyze the results.
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Measuring Cell Apoptosis by Annexin V-FITC

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Cell apoptosis ability was detected by Annexin V-fluorescein isothiocyanate (FITC) apoptosis kit (#556547; Becton, Dickinson and Company, Franklin Lakes, NJ, USA) with specification of manufacturer. After 48 hours transfection, cells were gathered and washed 3 times by phosphate-buffered saline (PBS). Then, we resuspended the cells into 1× binding buffer (1×106 cells/ml). Next, cells were stained with Annexin V-FITC for 15 minutes and propidium iodide (PI) for 5 minutes in the dark before examined by flow cytometry (BD Biosciences Accuri C6; Becton, Dickinson and Company). And the results were analyzed by Flowjo software (Flowjo, Ashland, OR, USA). The experiment was repeated three times.
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Annexin V-FITC Apoptosis Assay

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Cell apoptosis was detected with an Annexin V-fluorescein isothiocyanate (FITC) apoptosis kit (#556547; Becton, Dickinson and Company, Franklin Lakes, NJ, USA) according to the manufacturer’s instructions. Cells were collected and washed three times with phosphate-buffered saline. Next, 500 uL of 1× binding buffer was used to resuspend the cells, and the cell suspension was dyed successively with Annexin V-FITC for 15 min and propidium iodide (PI) for 5 min in the dark. A flow cytometer (BD Biosciences Accuri C6; Becton, Dickinson and Company) and FlowJo software (FlowJo, Ashland, OR, USA) were used to analyze the cells. The Annexin V- / PI+, Annexin V+ / PI+, Annexin V+ / PI- and Annexin V- / PI- populations corresponded to necrotic cells (quadrant 1), late apoptotic cells (quadrant 2), early apoptotic cells (quadrant 3) and viable cells (quadrant 4), respectively.
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