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3 protocols using ab195627

1

Western Blot Analysis of PXR and CYP3A2

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For western blotting, equal amounts of proteins were resolved by 10% SDS-PAGE (CW Biotech Co., Ltd.). Proteins were blotted onto a methanol-charged PVDF membrane using a wet transfer system (70 V, 2 h). The membrane was blocked with 5% bovine serum albumin for 1.5 h at room temperature, washed with Tris-buffer saline containing 0.1% Tween-20 (TBST) three times (5 min each time), and then incubated with the primary antibodies anti-PXR (1:1000, ab192579, Abcam, Cambridge, UK), anti-CYP3A2 (1:1000, ab195627, Abcam), or anti-GAPDH (1:4000, ab94282, Abcam). The membrane was washed with TBST five times (5 min each) and incubated for 1 h with goat anti-rabbit IgG H&L (HRP) secondary antibody (1:5000, ab6721, Abcam). After five washes with TBST, the protein bands were detected by chemiluminescence reagents (ECL kit ab133406, Abcam). An imaging system (ImageQuant LAS 500, GE Heathcare Life Sciences, Chicago, IL, USA) was used to visualize the protein bands, and densitometry was performed with Image J software. The density of each immunoreactive band was normalized to the density of its corresponding GAPDH band.
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2

Quantification of TMAO and Related Metabolites

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Trimethylamine hydrochloride, TMAO, NADPH, magnesium chloride, tris (hydroxymethyl) aminomethane (Trizma® base), Trizma® hydrochloride, n-octylamine, methimazole, L-arginine and formic acid ( ≥ 95%) were purchased from Sigma-Aldrich (St. Louis, MO). Deuterated internal standard (d9-trimethylamine N-oxide) was purchased from Cambridge Isotopes (Cambridge, MA, USA). Optima LC–MS grade water, acetonitrile, and methanol was purchased from Fisher Scientific (Pittsburgh, PA). Taqman® primers used for mRNA quantification were purchased from Applied Biosystems (Foster City, CA). All fluorescent antibodies were purchased from Abcam (Cambridge, MA) (Codes: ab2769, ab8226, ab22717, ab126790, ab195627, ab186693 and ab175774).
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3

Midazolam Metabolite Quantification Protocol

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MDZ base was purchased from the United States Pharmacopeial Convention (Rockville, MD, USA). The 1 0hydroxy (1 0 -OH-MDZ) and 4-hydroxy (4-OH-MDZ) metabolites of MDZ were procured from Cerilliant Corporation (Round Rock, TX, USA) and Sigma-Aldrich (St. Louis, MO, USA), respectively. The stable isotopes 1 0 -hydroxymidazolam-d 5
(1 0 -OH-MDZ-d 5 ) and 4-hydroxymidazolam-d 5 methanoate (4-OH-MDZ-d 5 ) were purchased from Toronto Research Chemicals (North York, ON, Canada). The primary antibodies against rat CYP3A2 (ab195627), calreticulin (Ab92516), and VDAC1 (Ab15895) and the secondary antibody (Ab6721) were purchased from Abcam (Cambridge, MA, USA). All the other reagents and chemicals were of high purity and purchased from commercially available sources.
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