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2 protocols using antibody diluent

1

Multiplex Immunofluorescence Staining and Analysis

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Multiplexed immunofluorescent staining and multispectral image analysis were performed as previously described [42 (link)]. In brief, 4‐mm‐thick formalin‐fixed paraffin‐embedded slides were deparaffinized in a Leica auto‐stainer (Leica Biosystems, Nussloch, Germany), and citrate buffer pH 6.0 (Shanghai Epizyme Biomedical Technology) was used for antigen retrieval. Slides were subsequently blocked with Antibody Diluent (BioGenex Laboratories, Fremont, CA, USA) and incubated with primary antibodies for 30 min at room temperature. Primary antibodies included ARID1A (1:300), CD8 (1:100, C8/1444B, Dako), GB (1:300), PD‐L1 (1:100) and NPM1 (1:200). After washing with TBST, the slides were incubated with horseradish peroxidase‐linked secondary antibodies (Life Technologies, Carlsbad, CA, USA). Afterwards, tyramide‐conjugated fluorophores (Opal, PerkinElmer, Waltham, MA, USA) were added at a 1:50 dilution and incubated for 10 min at room temperature. This process was repeated for all 5 antibodies, and 4’,6‐diamidino‐2’‐phenylindole (Life Technologies) was diluted at 1:500. Finally, slides were cover slipped with VECTASHIELD Hard Mount (Vector Laboratories, Burlingame, CA, USA). Scanning was performed with a Vectra automated multispectral microscope (PerkinElmer), and inForm software (PerkinElmer) was used for analysis.
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2

Immunohistochemical Staining of Xenograft Tumors

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For immunohistochemical staining of xenograft tumors, 5-μm serial sections were deparaffinized, rehydrated and subjected to antigen retrieval with 10 mM sodium citrate (pH 6.0) for 45 min. Before staining, non-specific binding was blocked by incubation with hydrogen peroxide as peroxidase suppressor (Thermo Scientific) and normal horse serum (Vector Laboratories) as blocking buffers, followed by incubating with 1:100 anti-CD31 (Abcam) antibodies in antibody diluent (Biogenex) at 4 °C overnight. All sections were briefly washed with phosphate-buffered saline and incubated at room temperature with horseradish peroxidase-conjugated secondary anti-rabbit antibody. Color was then developed by incubation with a DAB substrate kit (Vector Laboratories). Nuclei were counterstained blue with hematoxylin (Sigma Aldrich) and mounted in VectaMount Permanent mounting medium (Vector Laboratories). Isotype IgG controls were used as negative controls for the staining.
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