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18 protocols using luc2p nf κb re hygro

1

NF-κB and RELA 3'-UTR Luciferase Assay

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For the luciferase assay with NF-κB, pGL4.32 (luc2P/NF-κB-RE/Hygro) vector containing five copies of NF-κB response element (Promega) was used. The hDPCs were transfected with the reporter vector and miR-146b mimic or miR-146b NC using Lipofectamine 3000 transfection reagent (Thermo Fisher Scientific) and then stimulated with LPS (100 ng/mL). For the luciferase assay with RELA 3′-UTR reporter vector, synthesized RELA 3′-UTR containing wild-type or mutated hsa-miR-146b-5p target sequences (400 bps each; Eurofins Genomics, Ebersberg, Germany) were inserted into XhoI and HindIII sites of a pMIR-REPORT vector (Thermo Fisher Scientific). The reporter vectors along with miR-146b mimic or miR-146b NC were transfected into hDPCs via Lipofectamine 3000 transfection reagent (Thermo Fisher Scientific). Transfected cells were lysed with a luciferase cell culture lysis reagent and the luciferase activity was measured using luciferase assay system (Promega) and a luminometer (Luminescence PSN; ATTO).
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2

NF-κB Luciferase Reporter Assay

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Cells were transfected with the luciferase reporter plasmid pGL4.32[luc2P/NF-κB-RE/Hygro] (Promega, Madison, WI, USA), and stably expressing cells were selected with hygromycin. Before the luciferase assay, cells were plated on 96-well plates at a density of 1.5 × 104 cells/well and cultured in DMEM for 24 h. The cells were then treated with 20 ng/mL of TNF-α (Wako, Osaka, Japan) for 5 h. Luciferase activity was measured by using the Nano-Glo Dual-Luciferase Reporter Assay System (Promega). Each experiment was independently conducted three times, with five replicates for each sample.
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3

NF-κB Transcriptional Activity Assay

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HEK293 cells were transfected with the luciferase reporter plasmid pGL4.32[luc2P/NF-κB-RE/Hygro] (Promega, Madison, WI), and stably expressing cells were selected by hygromycin. Twenty-four hours before transfection, cells were plated on 96-well plates (1.5 × 104 cells/well). Transfection with plasmids was performed using FuGENE® HD Transfection Reagent (Promega). Twenty-four hours after transfection, cells were treated with tumor necrosis factor-α (TNF-α, 20 ng/ml) (Wako, Osaka, Japan) for 5 h. Then, luciferase activity was measured by using a Nano-Glo® Dual-Luciferase® Reporter Assay System (Promega). Each experiment was independently performed three times with five replicates of each sample.
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4

NF-κB Luciferase Reporter Assay

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For luciferase activity assays, the NF-κB luciferase reporter vector, pGL4.32 (luc2P/NF-κB-RE/Hygro, Promega), which contains five copies of an NF-κB responsive DNA element that drives transcription of the luciferase reporter gene was employed. Cells were co-transfected with the luciferase reporter vector and pRL-null vector expressing renilla luciferase as an internal control to normalize the transfection efficiency using Lipofectamine 2000 (Invitrogen). At 24 h after transfection, cells were treated with or without TNF- (10 ng/ml) for 6 h before luciferase assays. The luciferase activities were detected as previously described [30 (link), 31 (link)].
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5

Luciferase Assay for NF-κB Activation

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We used a previously constructed stable HEK293 cell line containing the luciferase reporter plasmid pGL4.32[luc2P/NF-κB-RE/Hygro] (Promega, Madison, WI, USA) [17 (link)]. Cells were plated in 96-well plates (1.5 × 104 cells/well) and were cultured in Dulbecco’s Modified Eagle Medium (DMEM) for 24 h before transfection with the plasmid and FuGENE HD Transfection Reagent (Promega). Transfected cells were cultured for 24 h and then treated with 20 ng/ml TNF-α (Wako, Osaka, Japan) for 5 h. The Nano-Glo Dual-Luciferase Reporter Assay System (Promega) was used to measure luciferase activity. We performed three independent experiments with five replicate samples each; Student’s t test was used for statistical analysis of these results.
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6

Measurement of NF-κB Promoter Activity

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For this assay, 1 × 106 HUVECs (PeloBiotech, Planegg/Martinsried, Germany) per aluminum cuvette were transiently transfected with a Renilla luciferase control plasmid pGL4.74[hRluc/TK] and a firefly luciferase reporter plasmid pGL4.32[luc2P/NFκB-RE/Hygro] (Promega, Heidelberg, Germany) at a ratio of 5:10 by electroporation (Amaxa nucleofector 2b device; Lonza, Basel, Switzerland). Twenty-four h after transfection, when HUVECs reached a density of 100% (confluency), the cells were treated with the indicated concentrations of 6-shogaol or 6-gingerol for 6 h before they were activated by LPS for 4 h (NFκB). Afterward, HUVECs were exposed to passive lysis according to the manufacturer’s instructions, and NFκB promotor activity was determined using the Dual-Luciferase Reporter Assay System (Promega, Heidelberg, Germany) using a luminometer (SPECTRAFluor Plus, Tecan, Männedorf, Switzerland).
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7

Generation of NF-κB Reporter AGS Cells

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AGS cells (CRL-1739) and HEK 293 cells (CRL-1573) were purchased from ATCC and tested for mycoplasma contamination. AGS cells stably expressing a luciferase-based NF-κB reporter were generated by transfection of the plasmid pGL4.32[luc2P/NF-κB-RE/Hygro] (Promega), antibiotic selection and cloning. AGS cells stably transfected with the NF-κB reporter were also transfected with a mix of shRNAs targeting NOD1. Colonies were selected using puromycin (10 µg/mL) and tested for NOD1 expression by real-time RT-PCR and Western blot.
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8

HVEM-Modulated NF-κB Activation Assay

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Plasmid pGL4.32[luc2P/NF-κB-RE/Hygro] (NF-κB–driven firefly luciferase; Promega) and pRL-TK (Renilla luciferase as an internal control; Promega) were cotransfected with mHVEMWT, mHVEM−BT/160, mHVEM−LIGHT, or control (vector only) into 293T cells by TransIT-LT1 Transfection Reagent (Mirus). 24 h later, transfected cells were co-cultured with control, mCD160-, or mLIGHT-transfected 293T cells. Luciferase activity was measured on the EnVision 2104 Multimode Plate Reader (PerkinElmer) using the Dual-Glo Luciferase Assay System kit (Promega) after another 18 h.
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9

Modulating NF-κB Signaling in AGS Cells

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AGS cells were obtained from ATCC and maintained in RPMI medium supplemented with 10% FBS and 10 mM HEPES. We also used AGS cells expressing a stable luciferase-based NF-κB reporter pGL4.32(luc2P/NF-κB-RE/Hygro; Promega) (29 (link)). Cells were treated with 5 mM DFMO for 7 days; DFMO was removed 24 h before the infection with H. pylori PMSS1 at a multiplicity of infection of 10. Putrescine (10 μM) was added 24 h before infection.
For transfections, AGS cells maintained in Opti-MEM I Reduced Serum Media (Invitrogen) were transfected with 100 nM ON-TARGETplus siRNAs (Dharmacon) directed against human ODC or LMNA (used as a control) using Lipofectamine 2000 (Invitrogen). After 16 h, cells were washed and maintained in fresh media for 36 h prior to infection.
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10

Investigating NF-κB Regulation in Fibroblasts

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NPDFs were plated on 60-mm cell culture plates. NF-κB luciferase reporter gene constructs (luc2P/NF-κB-RE/Hygro and hRluc/TK; Promega, Madison, WI, USA) were transiently transfected into NPDFs by using fetal bovine serum and antibiotic-free DMEM containing 5 µL of FuGENE transfection reagent (Promega). After 5 hours of incubation, the medium was replaced with DMEM containing 10% fetal bovine serum. After incubation for 24 hours, transfected NPDFs were treated with TGF-β1 (5 ng/mL), with or without delphinidin (20 µM), MAPK inhibitors (10 µM), and NF-κB inhibitor (1 µM) at 37℃ for 2 hours. Luciferase assays were performed to determine the firefly luciferase activity relative to the Renilla luciferase activity in the cell lysate using a luminometer (Promega).
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