Total RNA was isolated using TRI reagent and reverse transcribed using random hexamers and
Superscript III Reverse Transcriptase (Invitrogen) in a final volume of 20 μl. cDNA was diluted 10-fold, 3 μl of which was used as template for each qRT-PCR. qRT-PCRs were performed using
SYBR Green Universal Master Mix (Roche) in a final volume of 20 μl, and each was performed in triplicate, with a minimum of three biological repeats. A dilution standard curve was used to determine the relative expression levels.
Primer Sequences:
AXIN2 F: 5′-GCCGACTTCAAAAGCAAAAT-3′
AXIN2 R: 5′-GTAGGGGTTAACGGGATCGT-3′
BMP2 F: 5′-CCAACACCGTGTGCAGCTTCCA-3′
BMP2 R: 5′-GAAACGTCGTGCTGTTTTCCCAC-3′
BMP4 F: 5′-TGAGGAGCTTCCACCATGA-3′
BMP4 R: 5′-TGCTGAGGTTGAAGACGAAG-3′
BMP7 F: 5′-CGAACGCTTCGATAATGAAA-3′
BMP7 R: 5′-TTCTGGAGTCGAGCAGGAAC-3′
EDA F: 5′-TGGTCTCGCATCACTATGAAC-3′
EDA R: 5′-AATACTCCGAGTGCATTGCAG-3′
EDAR F: 5′-TTCTTTCGAGCCACTGTCCT-3′
EDAR R: 5′-CGAGGTCTGTTTTCCAGCAT-3′
ETV5 F: 5′-AGGCCTGGCTAGCTGAAGCTCA-3′
ETV5 R: 5′-ATCTTGGCTGGAGGTGGGGCAT-3′
FGF20 F: 5′-GCCAAGACCACAGCCTCTT-3′
FGF20 R: 5′-TTCCAAGGTAAAGGCCACTG-3′
GAPDH F: 5′-GACAACTTTGGCATTGTGGA-3′
GAPDH R: 5′-GGCTGTGATGGCATGGAC-3′
Ho W.K., Freem L., Zhao D., Painter K.J., Woolley T.E., Gaffney E.A., McGrew M.J., Tzika A., Milinkovitch M.C., Schneider P., Drusko A., Matthäus F., Glover J.D., Wells K.L., Johansson J.A., Davey M.G., Sang H.M., Clinton M, & Headon D.J. (2019). Feather arrays are patterned by interacting signalling and cell density waves. PLoS Biology, 17(2), e3000132.