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Eclipse ts100 microscope

Manufactured by Nikon
Sourced in Japan, United States, Australia, Germany, United Kingdom

The Nikon Eclipse TS100 is a compact inverted microscope designed for routine observation and documentation of specimens. It features a stable, vibration-resistant body and a high-quality optical system for clear, high-contrast images. The Eclipse TS100 is suitable for a variety of applications in fields such as cell biology, microbiology, and clinical diagnostics.

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345 protocols using eclipse ts100 microscope

1

Cell Migration Evaluation Protocols

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Cell migration was evaluated by wound healing assay and Transwell migration assay. HemSCs cells were seeded in 6-well-plates, and the cell monolayer was scratched with a sterile tip in the middle when cell confluence reached 80%. Then, the cell debris was washed away with culture medium. The pictures of cell morphology at different time points were taken with the Nikon Eclipse TS100 microscope. The narrowest distance of the gap between the front lines was measured by ImageJ software. Transwell migration assay was performed using the 8 μm pore size membrane chamber (Corning) in 24-well plates. Briefly, 2 × 105 cells were plated in the upper chamber with EBM-2 medium supplemented with 0.5% FBS. For 6 hours, cells were allowed to migrate to the bottom chamber, which contained RTK growth factors (100 ng/mL EGF, FGF2, or VEGF) in EBM-2 medium supplemented with 0.5% FBS or full growth medium. After fixation with 4% paraformaldehyde and staining with 0.1% crystal violet and PBS, images of cells that migrated across the pore membrane were captured with Nikon Eclipse TS100 microscope.
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2

Spatial Analysis of Cell Viability

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PI staining (Sigma-Aldrich Corporation, St. Louis, MO, USA) was used to examine the cell viability in the 1 cm circle, as well as the 2 and 3 cm bands of the irradiation area, providing more spacial information of the cell response to our designed irradiation intensities [34 (link)]. At 2, 24, and 48 h after irradiation, cancer cells were incubated with 7.5 μM PI buffer for 15 min at 37°C and then washed twice with PBS. PI fluorescence was monitored via Nikon Eclipse TS 100 microscope (Nikon Corporation, Tokyo, Japan). The setup for fluorescence imaging of PI fluorescence was as follows: Xenon lamp power (LPS-100, Photon Technology International, Inc. (PTI), Birmingham, NJ, USA); DeltaRAM X High-Speed Multi-Wavelength Illuminator LPS-100 (Photon Technology International, Inc. (PTI), Birmingham, NJ, USA); Nikon Eclipse TS 100 microscope and CCD camera (Nikon Corporation, Tokyo, Japan); ET excitation, 535 ± 15 nm; ET emission, 617 ± 37.5 nm, objective × 20. The emitted signal was captured and presented as an image of 1392 × 1040 pixels on a computer monitor using Macro-ImageJ software (National Institutes of Health, Bethesda, MD, USA). Three random areas were selected from each band for the cell viability assay. The mean fluorescence was analyzed using Adobe Photoshop CS6 (64 Bit) software (Adobe Systems Inc., San Jose, CA, USA) to determine the cell viability.
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Measuring Fungal Capsule Size In Vitro

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Capsule size in vitro was measured as described [25 (link)] and repeated twice. Briefly, 1 × 105 cells/mL of H99W and P15 were added to Dulbecco’s modified Eagle medium (DMEM, Invitrogen, catalog # 10,566–016) and incubated at 37°C + 10% CO2 for 18 h. Cells were collected, suspended in 10 μL PBS and added to a microscope slide with India Ink (Fisher Scientific, catalog # 14–910-56). Cells were imaged on an Eclipse TS100 Nikon microscope (Tokyo, Japan) with a 100× objective. For each strain, pictures of 30 cells were taken. The diameter of the cell body and capsule were measured using Nikon Elements software. Capsule diameter was calculated by subtracting the cell body diameter from the diameter of the entire cell + capsule and dividing by 2.
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Capsule Size Measurement in Cryptococcus

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Capsule size in vitro was measured as described in [47 (link)]. Briefly, 1 x 105 cells/ml of H99W, hva1Δ and hva1Δ+HVA1 were added to 2 ml DME and incubated at 37°C + 5–10% CO2 for 18 h. Cells were collected, resuspended in 10 μl PBS and added to a microscope slide with India Ink. Cells were imaged on an Eclipse TS100 Nikon microscope or an Olympus BX60 microscope at 100X with oil. For each strain, pictures of at least 30 cells were recorded. Cell body diameter and capsule diameter were measured using the Nikon Elements or Olympus software. Capsule diameter was calculated by subtracting the cell body diameter from the diameter of the entire cell + capsule and dividing by 2. This experiment was repeated six times (twice on a Nikon microscope and four times on an Olympus microscope).
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5

Wound Healing Assay Protocol

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Cells were plated in 6-well plates at a density of 1 × 106 cells per well and incubated overnight to allow cell attachment, as described by Liang et al. [25 (link)]. The center of the confluent cell monolayers was scratched, and cell cultures were treated as described. Selected areas were marked and photographed immediately (0 h) and, subsequently, every 24 h to record cellular migration into the wounded areas until 120 h, using an ECLIPSE TS100 Nikon microscope (Nikon, Tokyo, Japan) and dedicated software. Cell migration (space between scratch edges) was quantified by measuring the distance between both leading edges using ImageJ software (National Institutes of Health) [26 (link)].
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6

Long-term Spheroid Culture under Shear

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After 96h, representative images at both the center and edges of each 100mm culture dish were taken to monitor and measure spheroid growth using a 2M series Nikon digital camera attached to an inverted Eclipse TS 100 Nikon microscope with a 10x objective (Nikon Instruments, Inc., Melville, NY). Next, cells suspended in the supernatant were collected and all cells -both adherent and spheroids from the supernatant- were trypsinized. Cells were then stained with Trypan Blue (Sigma Aldrich, St. Louis, MO) and counted with a hemocytometer to determine the number of viable cells before re-seeding at the initial seeding density for successive 96-hour periods (3 in total). This experimental setup allows for the long-term exposure of growing and dividing cells to FSS while also allowing the enrichment of cells with FSS-induced altered phenotypes. Spheroid diameters were measured using NIS Elements AR software (Nikon Instruments, Inc., Melville, NY). All cell count data and spheroid diameter measurement data presented are means ± SEM of at least two biological replicates each performed in triplicate.
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7

Quantification of Cryptococcal Capsule Thickness

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Capsule thickness in vitro was determined as previously described [20 (link),21 (link)]. Briefly, 1 × 105 cells/mL of H99, rta1Δ, and rta1Δ+RTA1 were added to Dulbecco’s modified Eagle medium (DMEM, Invitrogen, Waltham, MA, USA, catalog #10566-016) and incubated at 37 °C + 10% CO2 for 18 h. Cells were collected, suspended in 10 μL PBS and added to a microscope slide with India Ink (Fisher Scientific, Waltham, MA, USA, catalog #14-910-56). Cells were imaged on an Eclipse TS100 Nikon microscope (Tokyo, Japan) with a 100× objective. For each strain, pictures of 50–70 cells were captured. The diameter of the cell body and capsule were measured using Zeiss AxioVision software, v4.9.1. Capsule thickness was calculated by subtracting the cell body diameter from the diameter of the entire cell + capsule and dividing by 2.
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8

Cell Density Quantification via Bright-field Microscopy

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The bright-field images were randomly acquired at different locations using a Nikon Digital Sight camera attached to a Nikon Eclipse TS100 microscope with 20× objective. Three independent experiments were performed. At least two bright-field images were taken for each well. Cells were manually counted and converted to cells/mm2.
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9

Semi-quantitative Analysis of SOFG Staining

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Histological sections were imaged using an Eclipse TS100 microscope and a DS-FI2 color camera (Nikon instruments). The successive images were assembled using MosaicJ-ImageJ. Red coverage of SOFG staining was semi-quantitatively analyzed using ImageJ 30 . Color images were first converted to Red-Green-Blue stacks and viewed as gray-scale images under green stack. Tissue appeared light and SOFG-positive stained regions appeared dark. Images were analyzed using the threshold function with a black to red ratio of 1:3. The percentage of GAG coverage was then measured for each section.
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10

Histopathological Analysis of Mouse Organs

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After incubation, mice were anesthetized using sodium pentobarbital, sacrificed by cervical dislocation and organs were removed immediately according to the CPCSEA SOP for laboratory experimental animals. Lung, liver and intestine were quickly dissected out, washed with PBS (pH 7), fixed in 10% neutral buffered formalin and processed for paraffin wax embedding. Five micron thick sections were stained in hematoxylin and eosin using Rapid H&E staining kit (BioLab Diagnostics, Tarapur, India) according to manufacturer’s instructions to observe the histopathological changes, if any, in a Nikon Eclipse TS100 Microscope (USA).
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