The largest database of trusted experimental protocols

Superose 6 increase 10 300 gl column

Manufactured by GE Healthcare
Sourced in United States, Sweden, Belgium, United Kingdom, Germany

The Superose 6 Increase 10/300 GL column is a size exclusion chromatography column designed for the purification and analysis of macromolecules such as proteins, nucleic acids, and protein complexes. The column features a hydrophilic, cross-linked agarose matrix that provides a high resolving power and a wide range of separation for molecules with molecular weights between 10,000 and 600,000 Daltons.

Automatically generated - may contain errors

191 protocols using superose 6 increase 10 300 gl column

1

Reconstitution of MICU1-MICU2 complex in nanodiscs

Check if the same lab product or an alternative is used in the 5 most similar protocols
To form empty nanodiscs, 0.2 ml of a lipid/DDM mixture (17 mM DDM, 10 mM lipids: POPE: POPG: cardiolipin [18:1] with a 2:2:1 wt ratio) was combined with 0.25 ml nanodisc scaffold protein (MSP1D1, Sigma, 5 mg/ml). After 1 hr incubation on ice, 0.4 ml buffer (20 mM HEPES pH 7.5, 150 mM NaCl) and ~200 mg wet Bio-Beads SM2 (Bio-Rad) were added, the sample was rotated at 4°C for ~16 hr to remove detergent, and then it was purified by size-exclusion chromatography (Superose 6 Increase, 10/300 GL column, GE Healthcare; equilibrated with 20 mM HEPES pH 7.5, 150 mM NaCl). The peak fractions were pooled, combined with purified MICU1-MICU2 protein (using a molar ratio of 1 MICU1-MICU2 : 1.5 nanodisc scaffold protein; 4°C, 30 min.), and the complex was purified by size-exclusion chromatography (Superose 6 Increase, 10/300 GL column, GE Healthcare; equilibrated with 20 mM HEPES pH 7.5, 150 mM NaCl). The peak fractions were collected, concentrated to 0.5 mg/ml (Vivaspin 2, 100 kDa cutoff), CaCl2 was added to a final concentration of 1 mM, and the sample was used for cryo-EM grid preparation.
+ Open protocol
+ Expand
2

Characterization of SARS-CoV-2 S-ACE2 Complex

Check if the same lab product or an alternative is used in the 5 most similar protocols
The purified SARS-CoV-2 S glycoprotein ectodomain and human ACE2 PD domain were mixed at a molar ratio of 1:3 and were incubated on ice for 2 hours. The mixture was purified by gel filtration chromatography using a Superose 6 increase 10/300 GL column (GE Healthcare) preequilibrated with 20 mM tris-HCl (pH 7.5), 200 mM NaCl, and 4% glycerol. For cross-linking complex, the buffers of purified SARS-CoV-2 S glycoprotein ectodomain and human ACE2 PD domain were exchanged to 20 mM Hepes (pH 7.5) and 200 mM NaCl; then, SARS-CoV-2 S and human ACE2 were mixed at a molar ratio of 1:3. After incubation on ice for 2 hours, the complex was cross-linked by 0.1% glutaraldehyde, which is commonly used in cryo-EM studies of fragile macromolecular complexes (46 (link), 47 (link)). The glutaraldehyde was neutralized by adding 20 mM tris-HCl (pH 7.5) after being incubated on ice for 1 hour. The mixture was run over a Superose 6 increase 10/300 GL column (GE Healthcare) in 20 mM tris-HCl (pH 7.5), 200 mM NaCl, and 4% glycerol. The complex peak fractions were concentrated and assessed by SDS–polyacrylamide gel electrophoresis and negative-staining EM.
+ Open protocol
+ Expand
3

Purification and Analysis of Plant-Derived Hemagglutinin

Check if the same lab product or an alternative is used in the 5 most similar protocols
Purified H5-Strep-tag trimers or H5 oligomers at a final concentration of 63 μg/mL, containing 8.5 μg of Strep-Tactin® XT (the amount of Strep-Tactin®XT required to form 63 μg of H5 oligomers), were loaded onto a Superose™ 6 increase 10/300GL column (GE Healthcare). We used a high-molecular-weight kit containing standard proteins with molecular weights in the range of 44 kDa to 2,000 kDa, which were loaded onto the column to estimate the molecular weights of the proteins of interest. Five hundred microliters per fraction were collected for the haemagglutination test and Western blot analysis.
Plant-derived haemagglutinin trimers purified by IMAC were further purified by size exclusion chromomatography using a SuperoseTM 6 increase 10/300GL column (GE Healthcare Bio-Sciences AB Björkgatan 30 751 84 Uppsala, Sweden) to eliminate host plant proteins. The purity of plant-derived haemagglutinin trimers was analyzed by SDS-PAGE and visualized by Coomassie blue staining (Supplementary Material). Purified haemagglutinin trimers were used as an antigen source to coat ELISA plates.
+ Open protocol
+ Expand
4

Purification and Characterization of proMbxA

Check if the same lab product or an alternative is used in the 5 most similar protocols
For SEC, proMbxA or MbxA containing IMAC fractions were pooled, concentrated to 0.5 ml and after centrifugation at 21,700 g for 20 min directly applied to a Superose 6 Increase 10/300 GL column (GE Healthcare) in SEC buffer (50 mM TRIS pH 7.8, 100 mM NaCl, 10 mM CaCl2). The chromatography was performed on an ÄKTA Purifier system (GE Healthcare).
proMbxA peaks resulting from the SEC were pooled separately and stored with 20% glycerol at − 80 °C. A subsequent SEC-MALS analysis was carried out to investigate the oligomeric state of the proMbxA species. The separated species were concentrated to 1.3–2.5 mg/ml and 200 µl of each were applied to a Superose 6 Increase 10/300 GL column (GE Healthcare) equilibrated with SEC buffer and connected to a miniDAWN TREOS II triple-angle light scattering detector (Wyatt Technologies) and an Optilab T-rEX differential refractive index detector (Wyatt Technologies). The set up was performed using an Agilent 1260 HPLC system with a flowrate of 0.6 ml/min and the data was analyzed with the ASTRA 7.1.2.5 software (Wyatt Technologies).
+ Open protocol
+ Expand
5

Characterization of Qβ-based VLPs

Check if the same lab product or an alternative is used in the 5 most similar protocols
The Qβ-based VLPs (Qβ, QβApoB, QβCETP, and QβPCSK9) were characterized as previously described[29 (link)] using fast protein liquid chromatography (FPLC), transmission electron microscopy (TEM), dynamic light scattering (DLS), sodium dodecylsulfate polyacrylamide gel electrophoresis (SDS-PAGE), and agarose gel electrophoresis. The Qβ VLPs concentration was determined by measuring the total protein using a Pierce BCA assay kit (Thermo Fisher Scientific). FPLC was performed using an AKTA-FPLC 900 system fitted with Superose 6 Increase 10/300 GL columns (GE Healthcare) using PBS as the mobile phase at flow rate 0.5 mL/min. TEM images were acquired on a FEI Tecnai Spirit G2 Bio TWIN transmission electron microscope. Samples were mounted on 400-mesh hexagonal copper grids and stained with 2% (v/v) uranyl acetate. DLS was carried out on a Malvern Instruments Zetasizer Nano at 25 °C in plastic disposal cuvettes. SDS-PAGE was performed under reducing conditions on NuPAGE 12% Bis-Tris protein gels [Thermo Fisher Scientific] at 120 mV for 35 min. and stained with Coomassie Brilliant Blue. Agarose gels (0.8% (w/v) in TAE buffer) were pre-stained with Gelred™ Nucleic Acid Gel Stain [GoldBio] and samples ran under non-reducing conditions at 100 mV for 30min. The gel images were acquired using the ProteinSimple FluorChem R imaging system.
+ Open protocol
+ Expand
6

SEC-MALS Characterization of Protein Complexes

Check if the same lab product or an alternative is used in the 5 most similar protocols
SEC-MALS analyses were used to determine the absolute molar masses of the protein complexes. The TSKgel G4000SWXL (Tosoh Biosciences) and the Superose 6 Increase 10/300 GL columns (GE Healthcare) were calibrated with at least 2 column volume of the gel filtration buffer (25mM PIPES, pH 7.0, 200 mM NaCl, 1mM MgCl2, 1mM EGTA, 1mM DTT). The columns were inline with a variable UV-absorbance detector (Agilent 1260 Infinity series) and a DAWN8+ MALS detector (Wyatt Technology). Molar masses were calculated with ASTRA 6 software (Wyatt Technology) with the dn/dc value set to 0.185 ml/g. Bovine serum albumin (BSA) was used as a calibration standard.
+ Open protocol
+ Expand
7

Characterization of Virus-Like Particles by Advanced Analytical Techniques

Check if the same lab product or an alternative is used in the 5 most similar protocols
The VLPs were characterized by fast protein liquid chromatography (FPLC), transmission electron microscopy (TEM), dynamic light scattering (DLS), and sodium dodecylsulfate polyacrylamide gel electrophoresis (SDS-PAGE). FPLC was performed using an AKTA-FPLC 900 system fitted with Superose 6 Increase 10/300 GL columns (GE Healthcare), using PBS (pH 7.4) as the mobile phase at a flow rate of 0.5 mL/min. TEM images were acquired on an FEI Tecnai Spirit G2 Bio TWIN transmission electron microscope. Samples were mounted on 400-mesh hexagonal copper grids and stained with 2% uranyl acetate. DLS was carried out on a Malvern Instruments Zetasizer Nano at 25 °C, in plastic disposal cuvettes. SDS-PAGE was performed on NuPAGE 12% Bis-Tris protein gels (Thermo Fisher Scientific) at 150 mV for 75 min. The gels were stained with Coomassie Brilliant Blue and images were acquired using the ProteinSimple FluorChem R imaging system.
+ Open protocol
+ Expand
8

Characterization of Hybrid Virus-Like Particles

Check if the same lab product or an alternative is used in the 5 most similar protocols
The VLPs were characterized as previously described27 (link),28 (link),29 (link). The VLP concentration was determined using a Pierce BCA assay kit (Thermo Fisher Scientific). To confirm hybrid QβS100A9 assembly and peptide display, 10 μg of QβS100A9 particles was analyzed by SDS-PAGE under reducing conditions on NuPAGE 12% Bis-Tris protein gels (Thermo Fisher Scientific) stained with GelCode Blue Safe protein stain (Thermo Fisher Scientific). The gel images were acquired using the ProteinSimple FluorChem R imaging system, and densitometry was used to determine the number of peptides displayed per hybrid QβS100A9 VLP. The integrity of VLPs was confirmed by TEM using a FEI Tecnai Spirit G2 BioTWIN instrument to examine samples stained with 2% uranyl acetate. FPLC was carried out using an AKTA-FPLC 900 system fitted with Superose 6 Increase 10/300 GL columns (GE Healthcare) using PBS as the mobile phase. Particle size was confirmed by DLS using a Malvern Instruments Zetasizer Nano at 25 °C and plastic disposable cuvettes.
+ Open protocol
+ Expand
9

SEC-MALS Characterization of Protein Complexes

Check if the same lab product or an alternative is used in the 5 most similar protocols
SEC-MALS analyses were used to determine the absolute molar masses of the protein complexes. The TSKgel G4000SWXL (Tosoh Biosciences) and the Superose 6 Increase 10/300 GL columns (GE Healthcare) were calibrated with at least 2 column volume of the gel filtration buffer (25mM PIPES, pH 7.0, 200 mM NaCl, 1mM MgCl2, 1mM EGTA, 1mM DTT). The columns were inline with a variable UV-absorbance detector (Agilent 1260 Infinity series) and a DAWN8+ MALS detector (Wyatt Technology). Molar masses were calculated with ASTRA 6 software (Wyatt Technology) with the dn/dc value set to 0.185 ml/g. Bovine serum albumin (BSA) was used as a calibration standard.
+ Open protocol
+ Expand
10

Characterization of Virus-Like Particles

Check if the same lab product or an alternative is used in the 5 most similar protocols
The concentration of VLPs was measured using a Pierce BCA assay kit (Thermo Fisher Scientific) as per the manufacturer’s protocols. VLPs were characterized by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), fast protein liquid chromatography (FPLC), dynamic light scattering (DLS), and transmission electron microscopy (TEM). SDS-PAGE was carried out using NuPAGE 12% Bis–Tris protein gels (Thermo Fisher Scientific) for 37 min at 200 V. Images were acquired using the FluorChem R imaging system (ProteinSimple) after staining the gel with Coomassie Brilliant Blue (Fisher Scientific). FPLC was performed using 300 μL of ~1 mg/mL VLP solution by an AKTA-FPLC 900 system fitted with the Superose 6 Increase 10/300 GL columns (GE Healthcare); PBS (pH 7.4) served as the mobile phase at a flow rate of 0.4 mL/min. DLS measurements were done with 100 μL of 0.1 mg/mL VLP solution using a Malvern Instruments Zetasizer Nano at 25 °C in plastic disposal cuvettes. The size was calculated from the weighted average of the number distribution. TEM was performed on an FEI Tecnai Spirit G2 Bio TWIN transmission electron microscope. The samples were prepared by mounting 0.2 mg/mL VLPs on the 400-mesh hexagonal copper grids and stained with 2% (w/v) uranyl acetate.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!