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65 protocols using mab5406

1

Immunohistochemical Staining Protocols

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We used the following lectins and primary antibodies for staining: biotinylated WFA (B-1355, Vector Laboratories; 1 : 200), mouse anti-parvalbumin (clone PARV-19, P3088; Sigma-Aldrich Japan, Tokyo, Japan; 1 : 1,000), mouse anti-NeuN (clone A60, MAB377; Millipore, Bedford, MA; 1 : 500), mouse anti-aggrecan (Cat-315; MAB1581, Millipore; 1 : 1,000), rabbit anti-GFAP (ab7260; Abcam, Cambridge, MA; 1 : 1,000), rabbit anti-IBA-1 (019-19741; FUJIFILM Wako Pure Chemical Corporation, Osaka, Japan; 1 : 1,000), mouse anti-GAD67 (clone 1G10.2, MAB5406; Millipore; 1 : 1,000), and guinea pig anti-VGLUT1 (AB5905; Millipore; 1 : 1,000).
We used the following secondary antibodies for visualization: Alexa Fluor 488-conjugated goat anti-mouse IgG (ab150113; Abcam, Cambridge, MA; 1 : 1,000), Alexa Fluor 594-conjugated goat anti-guinea pig (A-11076; Thermo Fisher Scientific, Waltham, MA; 1 : 500), FITC-conjugated anti-mouse IgM (sc-2082, Santa Cruz Biotechnology, Santa Cruz, CA, 1 : 1,000), Texas Red-conjugated goat anti-rabbit (TI-1000; Vector Laboratories, Funakoshi Co., Tokyo, Japan), and streptavidin-conjugated Alexa Fluor 594 (S11227, Thermo Fisher Scientific; 1 : 1,000).
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2

Immunohistochemical Analysis of Neuronal Subtypes

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To mark PCs, brain sections were incubated with a rabbit anti-calbindin D28K antibody (1:1000, PA1-931, Invitrogen, Waltham, MA) at 4 °C for 24–48 h. After being washed in PBS, sections were incubated with a goat anti-rabbit Cy5 (1:500, A10523, Invitrogen) at room temperature for 3 h. After another rinse with PBS, sections were mounted on slides and cover-slipped with a mounting medium (H-1500, Vector Labs). To identify subtypes of c-Fos positive neurons following the social recognition test, sections were incubated with primary antibodies of guinea pig anti-c-Fos (1:1000, 226308, Synaptic Systems, Gottingen, Germany), rabbit anti-CaMKII (1:200, PA5-99558, Invitrogen) and mouse anti-GAD67 (1:500, MAB5406, Millipore, Burlington, MA) at 4 °C for 24–48 h. After being washed in PBS, sections were incubated with secondary antibodies of goat anti-guinea pig Alexa 488 (1:1000, A11073, Invitrogen), goat anti-rabbit Alexa 555 (1:1000, A21428, Invitrogen) and goat anti-mouse Alexa 647 (1:1000, A21236, Invitrogen) at room temperature for 3 h. After another rinse with PBS, sections were mounted on slides and cover-slipped with a mounting medium (H-1500, Vector Labs). Images were taken with a Zeiss LSM 710 confocal microscope and Zen 2.0 software (Oberkochen, Germany).
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3

Immunofluorescence Labeling of Tyrosine Hydroxylase and GAD67 in Mouse Brain

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Mice were anaesthetized with Avertin (250 mg/kg, i.p.) and transcardially perfused with 4% paraformaldehyde (PFA) in PBS. Brains were postfixed in 4% PFA over 12 h and dehydrated in 10, 20, and 30% sucrose over 72 h for cryoprotection. Then frozen sections (40 µm; CM1950, Leica) were collected for permeabilization (0.3% Triton X-100 in PBS) and blocking (2% bovine serum albumin in PBS). After that, the sections were incubated with rabbit anti-TH primary antibody (1:500; AB152, Millipore) or mouse anti-GAD67 primary antibody (1:500; MAB5406, Millipore) overnight at 4 °C. After three washes, the sections were incubated with secondary antibodies (1:500; donkey anti-rabbit 594, A21207 or donkey anti-mouse 488, A21202; Invitrogen) for 1 h and DAPI for nuclear staining at room temperature. The sections were mounted on slides with 50% glycerol and kept at –20 °C. Immunofluorescence images were captured using a laser scanning confocal microscope (LSM710, Carl Zeiss) and paired sections were imaged and processed at the same settings. ImageJ (v1.51t, NIH, USA) and Adobe Illustrator (v2019-23.1.0, Adobe Systems) were used for image processing.
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Immunohistochemical Characterization of Primary Cell Cultures

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Primary cultures were prepared and pharmacological and cell morphology studies conducted as described previously (18 (link), 22 (link)). Immunohistochemistical analyses of microtubule-associated protein 2 (MAP2) (Abcam, ab5392, 1:10000), choline acetyl transferase (ChAT) (Millipore, AB144P, 1:1000) and glutamate decarboxylase (GAD67) (Millipore, MAB5406, 1:1000) were performed on DIV13 cells. GAD, ChAT, and MAP2 positive cells were counted.
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5

Antibodies Used for Protein Detection

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The following primary antibodies were used in the described experiments: mouse anti-HIP1R (612118, BD Biosciences Pharmingen), rabbit anti-HIP1R (AB9882, Milipore), mouse anti-GluN2B and rabbit anti-GFP (homemade mAb), rabbit anti-GluN2A (ab133265, Abcam), mouse anti-GluA1 (MAB2263, Millipore), rabbit anti-GluA1 (ab131507, Abcam), mouse anti-Myc (A2814, Santa Cruz), rabbit anti-Myc (ab32027, Abcam), mouse anti-MAP2 (M9942, Sigma-Aldrich), mouse anti-GAD67 (MAB5406, Millipore), rabbit anti-γ-aminobutyric acid A receptor (GABAA)-α1 (2583376, Millipore) mouse anti-postsynaptic density (PSD95; MAB1596, Millipore), mouse anti-synaptophysin (S5768, Sigma-Aldrich), and mouse anti-β-actin (A5316, Sigma-Aldrich).
The secondary antibodies used for western blotting were goat anti-mouse IgG-HRP (31460, Pierce) and goat anti-rabbit IgG-HRP (31420, Pierce). The secondary antibodies used for immunostaining were from Life Technologies (Grand Island, NY, USA).
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6

Quantifying GABAergic Neurons in Rat VTA

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Juvenile, adolescent and adult rats fed a standard diet, CE-2, were perfused in the same manner as described above. The VTA-containing sections (−4.9 mm to −5.8 mm from the bregma) were washed in PBS incubated with a blocking solution (0.1% Triton-X, 0.2% BSA, 0.2% NGS) for 30 min. These sections were then incubated with a mouse monoclonal anti-GAD67 antibody (MAB5406, 1:500, Millipore, CA) overnight at 4 °C. Then, the sections were incubated with Daylight 594-labelled anti-mouse IgG (ThermoFisher, IL) for 30 min, mounted with mount medium on glass slides, and covered with a cover glass. The images were acquired using a confocal laser-scanning microscope (Fluoreview FV10i; Olympus, Osaka, Japan). All images were captures in the same light intensity. GAD-positive neurons were counted from the microscope images and the relative intensity of brightness was measured by NIH image software (Image J 1.48 v, National Institute of Health).
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7

Immunofluorescent Staining Protocol for Neuronal Markers

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Immunofluorescent staining was performed as described previously (Gao et al., 2019 (link)). Tissue sections were blocked for 1 hr at room temperature in PBST (0.3% Triton X-100) with 5% normal donkey serum, followed by incubation with primary antibodies at 4°C overnight and secondary antibodies at room temperature for 2 hr in PBST (0.3% Triton X-100) with 1% normal donkey serum. Primary antibodies used for immunofluorescent staining were anti-MOR (rabbit, 1:500 for brain and spinal cord, 1:1000 for DRG, ABCAM, ab134054), anti-CGRP (goat, 1:500, ABCAM, ab36001), FITC-IB4 (1:200, Sigma, L2895), anti-c-Fos (rabbit, 1:15000, Synaptic System, 226003), anti-VGluT2 (guinea pig, 1:2000, Millipore, AB2251-I), anti-GAD67 (mouse, 1:500, Millipore, MAB5406). Secondary antibodies were donkey anti-goat IgG-Cy5, donkey anti-rabbit IgG-Cy3, donkey anti-rabbit IgG-Alexa 488, donkey anti-mouse IgG-Alexa 488 and donkey anti-guinea pig IgG-Cy5 (1:200, Jackson ImmunoResearch Laboratories).
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8

Tracing Neurogenesis and GABAergic Neurons

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After continuous administration of ZTC for 8 days, BrdU was firstly injected twice by 2 h interval; and after 20 days, BrdU was again injected twice by 2 h interval; and after another 24 h, the mice were sacrificed and the brain slices were prepared for immunochemistry experiment. The mouse brain was treated with 4% paraformaldehyde for more than 48 h, and then dehydrated by two steps in 20% and 30% sucrose, separately. Coronal continuous sections, thickness 20 um, each 10 pieces were collected in a small hole in a 24-well plate. Subsequently, different samples were randomly sampled at the same location and stained and the results were counted (Liang et al., 2017 (link)). BrdU staining: Sections were blocked with 1% H2O2 in dark at room temperature for half an hour, and melted by 2M HCI at 37°C for 1 h, and the primary antibody (1: 500; Cat. No. MAB3424, Millipore) was incubated at 4°C overnight. GAD67 staining: brain sections were blocked with 0.5% Tween in PBS for 2 h, and diluted with 0.05% Tween in PBS for primary antibody (1: 500; Cat. No. MAB5406, Millipore) and incubated overnight at 4°C. DCX brain sections were blocked with 0.5% Triton-100 in PBS for 2 h, and diluted with 0.3% Triton-100 in PBS for primary antibody (1: 500; Cat. No. 4604, Cell Signaling) and incubated overnight at 4°C.
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9

Visualization of Inhibitory Neurons in Mouse V1

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Two weeks after the rabies virus injection, mice were anaesthetised with isoflurane, injected with sodium pentobarbital (0.01 mL/g) and perfused trans-cardially with ice-cold phosphate buffered saline (PBS), followed by 4% ice-cold PFA in PBS. The brain was extracted, postfixed for 24h in 4% PFA PBS at 4°C, and finally transferred to a 30% sucrose PBS at 4°C. 50 μm thick coronal sections were serially cut on a vibratome to span the whole V1, washed in PBS, blocked with a 0.3% triton-X100, 1% BSA solution in PBS and processed with the following antibodies: mouse anti-GAD67 primary antibody (1:1500, Millipore MAB5406), donkey anti-mouse IgG Alexa 647 conjugate secondary antibody (1:800, Merk Millipore AP192SA6). Sections were mounted on SuperFrost slides (Molecular Probes), air dried, and cover-slipped with Fluoromount (Sigma-Aldrich). Z-stacks tile scans of each slide were imaged with a Nikon Eclipse Ti2-E inverted epifluorescence microscope and manually aligned to the corresponding sections from in vivo z-stacks. Images were high-pass filtered for display (Extended Data Figure 5).
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10

Multimodal Phenotyping of Mouse Brain

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Gelatin-embedded, 40 μm sections of PFA-fixed mouse brains were stained with the following antibodies: mouse anti-Gad67 (cat. no.: MAB5406; Millipore; 1:1000; RRID: AB_2278725); chicken anti-GFP (cat. no.: GFP-1020; Aves; 1:1000; RRID: AB_10000240); rabbit anti-NeuN (cat. no.: ABN78; Millipore; 1:1000; RRID: AB_10807945); mouse anti-parvalbumin (cat. no.: 235; Swant; 1:7000; RRID: AB_10000343); rabbit anti-calretinin (cat. no.: 7699/4; Swant; 1:5000; RRID: AB_2313763); and AlexaFluor-, Cy3- or Cy5-conjugated secondary antibodies (Invitrogen or Jackson ImmunoResearch). To ensure a more homogeneous GAD67 fluorescence for the post-hoc immunostaining of imaged brains, the brain slices were incubated twice in the primary antibody solution, each for 1 week at 4°C. The secondary antibody was also applied twice, but overnight at room temperature. Cell counting was performed manually in FIJI using the Cell Counter plug-in on confocal z-stacks. Confocal images were acquired using a Zeiss LSM700 microscope. Overview epifluorescence images were acquired using a Zeiss AxioImagerM2 equipped with a Zeiss Axiocam 503 mono camera.
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