The largest database of trusted experimental protocols

66 protocols using lambda dg 4

1

Fura-2AM-based Ca2+ Imaging Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fura-2AM- (Molecular Probes, Eugene, OR) based Ca2+ imaging experiments were performed as previously described [19 (link)]. Briefly, cells loaded with fura-2AM (5 μM) at 37°C were placed onto an inverted microscope (IX70, Olympus) and illuminated with a 175 W xenon arc lamp. Excitation wavelengths (340/380 nm) were selected using a Lambda DG-4 monochromatic wavelength changer (Sutter Instrument, Novato, CA). Intracellular free Ca2+ concentration ([Ca2+]i) was measured at 36°C via digital video microfluorometry using an intensified charge-coupled device camera (Cascade, Roper Scientific, Trenton, NJ) coupled to a microscope and a Pentium 5 computer with imaging software (Metamorphor, Universal Imaging Corp., PA).
+ Open protocol
+ Expand
2

Fura-2 Fluorescence Imaging Technique

Check if the same lab product or an alternative is used in the 5 most similar protocols
The detailed procedures employed for loading cells with Fura-2 and dye calibration were reported earlier[13 (link), 20 (link)]. In brief, cells were loaded with the dye for 30 min at room temperature, in the dark, in the physiological solution supplemented with 5 μM Fura-2/AM and 0.02% of Pluronic F-127. After loading, the coverslip was placed in a glass-bottomed perfusion chamber mounted on an IX71 microscope (Olympus America, Center Valley, PA) and washed with the physiological solution for 15 min to allow for deesterification of the dye. Fura-2 fluorescence was measured using an ET FURA2 filter set (Chroma Technology, Bellows Falls, VT) and a UApoN340 40×/1.35 objective (Olympus). A fast wavelength switcher Lambda DG4 (Sutter Instruments, Novato, CA) was employed to excite the dye alternatively at 340 and 380 nm and fluorescence was recorded at 510 nm. Images were acquired in a streaming mode (20 ms exposure, 25 image pairs/s) using Metafluor v.7.5 software (Molecular Devices, Sunnyvale, CA) and iXon Ultra 897 EM CCD camera (Andor Technology, Belfast, UK).
+ Open protocol
+ Expand
3

Ratiometric Fura-2 Calcium Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fura-2 fluorescence signals were acquired with a CCD camera (Hamamatsu ORCA-ER) connected to its frame grabber driven by Slidebook software (Intelligent Imaging Innovations, Denver, CO, USA). An ultra-high-speed wavelength switcher Lambda DG-4 (Sutter Instruments, Novato, CA, USA) provided alternating excitation for ratiometric Fura-2 measurements. The filters were 340HT15 and 380HT15. The illumination source was a standard xenon lamp. The sampling frequency of 0.2 Hz was sufficiently fast to capture responses to bombesin and GRP. At this excitation frequency, photobleaching and phototoxicity were minimal. Fura-2AM loading and data acquisition were carried out as described in our previous studies.
+ Open protocol
+ Expand
4

In Vivo GCaMP Imaging in Prefrontal Cortex

Check if the same lab product or an alternative is used in the 5 most similar protocols
GCaMP imaging was performed on an Olympus BX51 upright microscope with a 20× 1.0NA water immersion lens, 0.5× reducer (Olympus), and ORCA-ER CCD Camera (Hamamatsu Photonics). Illumination was delivered using a Lambda DG4 arc lamp (Sutter Instruments). Light was delivered through a 472/30 excitation filter, 495nm single band dichroic, and 496nm long pass emission filter (Semrock).
All movies that were analyzed consisted of 36000 frames acquired at 10Hz (1 hr) with 4×4 sensor binning yielding a final resolution of 256 × 312 pixels. Light power during imaging was 100 – 500 μW/mm2. The Micro Manager software suite (v1.4, NIH) was used to control all camera parameters and acquire movies Any movies that had significant drift (greater than ~0.25 soma diameters), movement, or lacked significant amounts of activity were excluded from further analysis. Significant movement could be detected during independent components analysis (ICA) by the appearance of elliptical rather than circular segments. We observed that active, GCaMP-expressing neurons were found within a discrete layer (c.f. Fig. 1A) consistent with the location of layer 5 in medial prefrontal cortex.
+ Open protocol
+ Expand
5

TIRF Microscopy of Live Cell Dynamics

Check if the same lab product or an alternative is used in the 5 most similar protocols
TIRF was carried out on Olympus IX81 microscope equipped with Lambda DG-4 (Sutter Instruments, Novato CA) widefield illumination system and Evolve 512 EMCCD (Photometrics, Tucson, AZ) camera, with Cell-TIRFTM (Olympus) illuminator and ×60/1.45NA oil objective using Slidebook 6.0.15 (Intelligent Imaging Innovations, Inc. Denver, CO). The cells being imaged were maintained at 37 °C in the Tokai Hit microscope stage top ZILCS incubator (Tokai Hit Co., Japan). For TIRF imaging laser angle was set to obtain penetration depth of 70–120 nm.
+ Open protocol
+ Expand
6

Measurement of Intracellular Calcium Dynamics

Check if the same lab product or an alternative is used in the 5 most similar protocols
The intracellular Ca2+ concentration ([Ca2+]i) was measured as previously described. Briefly, [Ca2+]i was measured using the Lambda DG-4 fluorescence measurement system (Sutter Instruments, Novato, CA, USA). Cells were placed on glass coverslips and loaded with Fura-2/AM in darkness for 30 min at 37 °C. After dye loading, the cells were washed and transferred to a perfusion chamber on a fluorescence microscope. Fura-2 signals were obtained by alternating excitation at 340 or 380 nm, and detecting emission at 510 nm. A normal physiological salt solution was used for bath perfusion that contained 135 mM NaCl, 5.4 mM KCl, 1 mM MgCl2, 2 mM CaCl2, 5 mM HEPES, and 10 mM glucose (pH 7.4). The data were analyzed using MetaFluor software (Sutter Instruments). All [Ca2+]i measurements were performed at 37 °C using a heat controller (Warner Instruments, Hamden, CT, USA).
+ Open protocol
+ Expand
7

Doxorubicin Fluorescence Monitoring in BNL1 ME Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cultured BNL1 ME cells were perfused continuously at 2 ml per min with DMEM and examined with an inverted microscope equipped with Epi-Fl attachment, perfect focus system (Nikon) and EXi Aqua monochromator (QImaging). Doxorubicin fluorescence was measured as absorbance at 480 nm (580 nm for emission, Lambda DG4, Sutter Instruments). Images were taken every 10 min, monitored online, and analyzed offline using Nikon Elements AR Software (Nikon). 2-APB (200 μM) or CBD (10 μM) and doxorubicin (1 and 5 µM) were bath applied using a fast-step valve control perfusion system, at a rate of ∼1 ml per min.
+ Open protocol
+ Expand
8

Imaging Endothelial Cell Excitation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Endothelial cells were excited with a 175-W xenon arc lamp. Hoechst and Alexa 488 were excited at wavelengths of 350 nm and 495 nm and fluorescence emission captured at 450 nm and 515 nm, respectively. Excitation wavelengths were generated by a Lambda-DG4 controller (Sutter). Images were collected using a Nikon Eclipse Ti microscope equipped with an x10 Plan Flour oil immersion DIC objective, numerical aperture of 0.3 coupled with a Quantem 512SC camera. Fluorescence images were acquired using NIS Elements (Nikon) software.
+ Open protocol
+ Expand
9

Measuring Neuronal Calcium Dynamics

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cortical neurons were cultured on coverslips and were loaded in Tyrode’s solution with 5 μM Fura-2 AM (Abcam) and 0.02% Pluronic F-127 (Invitrogen) in incubator for 30 min. Neurons were pre-incubated in 5 mM [K+]o solution and perfused with high [K+]o solution, then washed out by 5 mM [K+]o. Fluorescence ratio (F340/F380) was achieved with a standard ratiometric Ca2+ imaging system, which included an inverted IX71epi-fluorescence microscope (Olympus), a camera of EMCCD DU-897D (Andor Technology), the light source of Lambda DG-4 (Sutter instrument), the excitation filters of 340 nm and 380 nm: FF01-340/26-25 (Semrock) and FF01-380/14-25 (Semrock), the emission filters of ~510 nm: FF01-504/12-25 (Semrock), and the dichromatic mirror: DM 400 in U-MWU2 cube (Olympus). Images were acquired and analyzed by MetaFluor software (Molecular Devices).
+ Open protocol
+ Expand
10

Measurement of Neuronal Calcium Dynamics

Check if the same lab product or an alternative is used in the 5 most similar protocols
The [Ca2+]c was measured according to our previous publication [36 (link)]. Briefly, neuron-plated cover slips were exposed to Fura-2-AM (5 μM) for 30 min at room temperature, washed 3 times with regular Tyrode’s solution, and given 30 min for de-esterification. For Ca2+ microfluorometry, the fluorophore was excited alternately with 340-nm and 380-nm wavelength illumination (150W Xenon, Lambda DG-4, Sutter, Novato, CA), and images were acquired at 510 nm using a cooled 12-bit digital camera (Coolsnap fx, Photometrics, Tucson, AZ) and inverted microscope (Diaphot 200, Nikon Instruments, Melville, NY). Recordings from each neuron were obtained as separate regions (MetaFluor, Molecular Devices, Downingtown, PA) at a rate of 3 Hz. After background subtraction, the fluorescence ratio R for individual neurons was determined as the intensity of emission during 340-nm excitation (I340) divided by I380, on a pixel-by-pixel basis. The [Ca2+]c was then estimated by the formula Kd·β·(RRmin)/(RmaxR) where β = (I380max)/(I380min). Traces were analyzed using Axograph X 1.1 (Axograph Scientific, Sydney, Australia). Activation-induced transients were generated by depolarization produced by microperfusion application of KCl 50 mM for 3 s.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!