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4 protocols using anti foxp3 fitc

1

Lymph Node Immunophenotyping by Flow Cytometry

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The following extracellular, anti-human monoclonal antibodies were used for lymph node immunophenotyping: anti-CD3 PE-Cy 7, anti-CD8+PE-Cy 5, anti-CD4 FITC, anti-CD62L PE-Cy 5, anti-CD69 FITC, anti-CD152 (CTLA-4) PE, anti-CD11c PE-Cy 5, anti-CD86 PE-Cy 7, anti-HLA-DR PE, anti-CD3 FITC, anti-CD14 FITC, anti-CD16 FITC, anti-CD19 FITC, anti-CD123 PE-Cy 7, anti-CD141 PE, anti-CD68 PE-Cy 5, anti-CD20 PE, anti-CD56 PE, anti-CD279 (PD-1) APC, anti-CD11b PE, anti-CD64 FITC (BD Pharmingen, San Jose, CA).
The human monoclonal antibodies, anti-CD4 PE-Cy 5 and anti-CD25 PE, were purchased from Biolegend (San Diego, CA) and used in conjunction with intracellular staining with anti-FoxP3 FITC for the quantification of regulatory T cells. Cell death was determined by propidium iodine staining (eBioscience, San Diego, CA USA). Four-color flow cytometry was performed on a Guava 8HT flow cytometer (EMD Millipore, Billerica, MA USA) capturing 25,000 events for all samples. Results were analyzed using Guava Soft Incyte (EMD Millipore, Billerica, MA USA).
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2

Tumor Immune Cell Profiling

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Tumors were harvested, weighed, minced, and digested for 45 minutes with gentle shaking at 37°C, in HBSS containing 7 mg/ml Collagenase D and 2 mg/ml DNase-I (Roche). Single cell suspensions were stained with antibodies including anti-CD45-APC-Cy7, anti-CD3-Vioblue, anti-CD8-PCP, anti-CD4-PCP, anti-Foxp3-FITC, anti-CD11b-APC, CD11b-PCP, anti-Gr-1-PE-Cy7, anti-Ly6C-PE, and anti-Ly6G-PE-Cy7 (BioLegend or eBioscience); anti-CCR2-APC or control Rat IgG2B-APC antibody were obtained from R&D. Cells were fixed/permeabilized using reagents from the Foxp3 staining kit (eBioscience). Flow cytometry was performed on a Miltenyi MACSQuant 10 Analyzer. Representative gating strategies are presented in Supplementary Fig. S1. To determine absolute cell number per gram of tumor, total numbers of cells in appropriate gates were multiplied by a correction factor for the proportion of the tumor sample run through the cytometer, and normalized for total tumor weight.
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3

Phenotypic Analysis of Tumor-Infiltrating Immune Cells

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Mice immunized and challenged with CT26 cells were sacrificed five weeks after tumor inoculation. Splenocytes were harvested and cultured overnight at 37°C, then were used for staining. Cells within the tumor microenvironment were isolated and harvested from mice two weeks after immunization and tumor challenge by 0.1% collagenase. Antibodies used to phenotype the cells were anti-CD4-APC, anti-CD8-FITC, anti-CD69-PE, anti-IFN-γ-PE, anti-CD11b-APC, anti-Gr-1-FITC, anti-CD25-PE and anti-FoxP3-FITC (Biolegend).
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4

Multicolor Flow Cytometry Immune Profiling

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All fluorophore-conjugated antibodies were obtained from Biolegend: anti-CD45-FITC, anti-CD206-PE, anti-F4/80-PE/Cy7, anti-CD115-APC, anit-IA/IE-APC/Cy7, anti-CD3-BV421, anti-FoxP3-FITC, anti-CD45-PE, anti-CD4-PE/Cy7, anti-RoRγt-PE/Cy7, anti-CD8a-APC/Cy7, anti-Granzyme B-FITC, anti-PD-1-APC, and anti-CD11b-BV421. Cell staining was performed for 1 hour at 4 °C, with 2% rat serum (Sigma) to reduce antibody binding to Fc receptors. In all conditions, doublets and multiplets were excluded by forward scatter pulse width (FSC-W) vs. forward scatter pulse area (FSC-A) gating and live cells were selected via negative selection for Yellow Amine Dye (Life Technologies) staining. Gating of positively stained cells was determined by fluorescence-minus-one (FMO) controls. Cells were analyzed using an 8-color MACSQuant 10 (Miltenyi Biotec) with three laser sources (405 nm, 488 nm, 635 nm) and FlowLogic 501.2 A software (Inivai Technologies).
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