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6 protocols using anti cd54

1

Isolation and Priming of Neutrophils

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Peripheral blood samples were collected in tubes containing EDTA and processed within an hour after collection. Neutrophils were isolated by density centrifugation using the Histopaque gradient technique (Sigma-Aldrich) according to the manufacturer’s protocol. Contaminating erythrocytes were removed with FACS lysing solution and washed with PBS containing 1% BSA. Viability of neutrophils after purification, assessed by trypan blue exclusion and flow cytometry of propidium iodide-stained cells, was greater than 96%.
For priming of isolated neutrophils, cells (1.5 × 106 cells/mL) were cultured at 37°C in RPMI-1640 (Sigma-Aldrich) supplemented with 10% heat-inactivated fetal calf serum, 2 mM L-glutamine, 1 mM sodium pyruvate, 5 mM HEPES, 100 U/mL of penicillin, 100 µg/mL of streptomycin in the absence or presence of 100 ng/mL LPS (Escherichia coli 0111:B4, Sigma-Aldrich) in a total volume of 500 µL for 4 hours. After stimulation, neutrophils were harvested, washed once with cold PBS and stained with anti-CD54, CD64, CD11b, CD15, TLR2 (clone TL2.1), TLR4 (clone HTA125) (all BioLegend) and analyzed with flow cytometer similarly to the analysis of surface antigens. Supernatants were stored at -80°C until analysis of cytokine production.
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2

Flow Cytometry Analysis of Immune Markers

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Analysis of surface marker expression was carried out by flow cytometry as described previously [28 (link)] using FITC or PerCP/Cy5.5-conjugated antibodies. FITC-conjugated antibodies used were anti-CD3 (BD Biosciences, cat # 349201), anti-CD28 (BD Biosciences, cat # 561790), anti-CD83 (BD Biosciences, cat# 556910), anti-CD86 (Abcam, Cambridge, MA, cat # Ab77276), anti-CD54 (Santa Cruz, Dallas, TX, cat # SC-107), and IgG2a isotype control (Sigma, cat # F6522). PerCP-Cy5.5-conjugated antibodies anti-CD86 (cat # 374215), anti-CD54 (cat # 353119), anti-CD80 (cat # 305231), and IgG1κ isotype control (cat # 400150) were purchased from Biolegend, San Diego, CA.
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3

Immunophenotyping of Hematopoietic Cells

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Flow cytometric analysis of the OP9 cells and primary BM cells were performed with the use of FACSCanto (Becton Dickinson, San Jose, CA). The following antibodies were used: anti-PDGFRβ, anti-CD31, anti-CD45, anti-Ter119, anti-CD54 (Biolegend), anti-CD3, anti-CD4, anti-CD8, anti-CD34, anti-Mac-1, anti-Gr-1, anti-B220, and anti-TER-119, anti-NK.1.1, anti-CD106 anti-hCDRA (BD Biosciences), and anti-CD61 anti-CD140a (eBioscience) anti-CD44 anti-hCD45RO (Pharmingen), anti-Notch-1, anti-Notch-4, anti-Jagged-1 (eBioscience), anti-Notch-2, anti-Notch-3, anti-Dll-1, and anti-jagged-2 (Biolegend).
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4

Multicolor Flow Cytometry Panel for Immune Cells

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The following rat anti-mouse mAbs were used for flow cytometry: anti-CD3 (clone: 17A2, BioLegend), anti-CD4 (clone: RM4-5, BD Pharmingen), anti-CD11b (clone: M1/70, BioLegend), anti-CD11c (clone: HL3, BD Biosciences), anti-CD18 (clone: M18/2, Biolegend), anti-CD25 (clone: 3C7, BioLegend), anti-CD28 (clone: 37.51, BioLegend), anti-CD29 (clone: HMβ1-1, BioLegend), anti-CD44 (clone: IM7, BioLegend), anti-CD45 (clone: 30F11, BioLegend), anti-CD49d (clone: PS/2, Southern Biotech), anti-CD54 (clone: INY1/1.7, BioLegend), anti-CD69 (clone: H1.2F3, BioLegend), anti-CD80 (clone: 16-10A1, BioLegend), anti-CD86 (clone: GL1, BioLegend), anti-GM-CSF (clone: MP1-22E9, BioLegend), anti-IFN-γ (clone XMG1.2, eBioscience), anti-IL-4 (clone: 11B11, BioLegend), anti-IL-5 (clone: TRFK5, eBioscience), anti-IL-10 (clone: JES5-16E3, eBioscience), anti-IL-13 (clone: eBio13A, eBioscience), anti-IL-17A (clone: TC11-18H10, BD Bioscience), anti-MHCII (clone: 2G9, BD Biosciences), anti-RORγt (clone: AFKJS-9, eBioscience). The following mAbs were produced in our lab from hybridomas: anti-CD16/32 (clone: 2.4G2), anti-ICAM-1 (clone: 25ZC7), anti-ICAM-2 (clone: 3C4), anti-α4β7 (clone: DATK 32), anti-LFA-1 (clone: FD448.1), anti-PSGL-1 (clone: 4RA10), anti-α4 (clone: PS/2).
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5

Phenotyping of Extracellular Vesicles

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hBMSC culture supernatants were added directly to Dynabeads (2 mL/mL beads) coated with anti-MHC class II (MHCII) antibodies (clone HKB1; Invitrogen/Dynal, Paisley, United Kingdom), as previously described [24] (link). Beads were labeled with fluorescein isothiocyanate-labeled anti-MHC class I, anti-MHC class II, CD63, CD86 and phycoerythrin-labeled anti-CD54 or isotype-matched controls (BioLegend, San Diego, Calif). Samples were analyzed in a FACS Calibur (BD Biosciences, San Jose, CA) by using forward scatter/side scatter bead gating, and mean fluorescence intensity (MFI) ratios were calculated as the geometric mean of the marker divided by the geometric mean of the isotype control.
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6

Aortic Endothelial Immunophenotyping in Mice

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For en face analysis the inner curvature of the aortic arch from female mice was fixed for 40 min in 4% PFA, washed in PBS and permeabilized with 0.1% Triton X-100 for 10 min, and blocked with 10% normal goat serum in casein. Samples were incubated with either anti-CD54 (Biolegend, 116101) or, VCAM-1 (BD 550547), or the appropriate IgG at 1:50 dilution overnight at 4°C and the appropriate secondary, washed and further stained for β-Cadherin (BD Biosource, 610153) followed by DAPI, mounted and imaged with an Olympus confocal microscope (FV3000).
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