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10 protocols using ab50009

1

Stereologic Analysis of OPCs and Oligodendrocytes

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Two separate sets of serial sections containing the mPFC from each group of rats were chosen and immunoreacted with mouse anti-NG2 antibody (ab50009, Abcam, USA) and mouse anti-CNPase antibody (ab6319, Abcam, USA), respectively, for the stereologic analyses of the total numbers of OPCs and mature oligodendrocytes in the mPFC. The optical fractionator40 (link) was used to estimate the total numbers of NG2+ and CNPase+ cells in the mPFC (Supplementary Fig. 1a, b).
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2

Immunofluorescence Characterization of ADPs

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The ADPs (passage 3) were grown on a four-well chambered cell culture slide. After fixation with 4% paraformaldehyde and washing with PBS, the cells were incubated with primary antibody against CD146 (dilution 1:100; ab210072), PDGFR-β (dilution 1:100; ab69506), NG2 (dilution 1:100; ab50009), CD45 (dilution 1:100; ab10558), CD34 (dilution 1:100; ab81289), CD31 (dilution 1:100; ab119339), CD73 (dilution 1:100; ab175396), CD90 (dilution 1:100; ab225), CD105 (dilution 1:100; ab11414), Nestin (dilution 1:100; ab11306), and MAP2 (dilution 1:100; ab36447) (all from Abcam, see Supplemental Table 1) in PBS/0.1%Tween 20 and 10% normal goat serum overnight at 4°C. The cells were washed with PBS and incubated with secondary antibodies: goat anti-rabbit IgG Alexa Fluor 594 (dilution 1:500; A-11012), goat anti-rabbit IgG Alexa Fluor 488 (dilution 1:500; A-11008), and goat anti-mouse IgG Alexa Fluor 488 (dilution 1:500; A-11029) (all from Thermo Fisher Scientific, Waltham, MA, USA) in PBS for 45 min at room temperature. After washing in PBS, the cells were mounted in antifade reagent with 4’,6-diamidino-2-phenylindole (DAPI; Thermo Fisher Scientific) for 1 min and visualized with an inverted fluorescence microscope Axio Observer A1 (Carl Zeiss, Jena, Germany).
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3

Multicolor Immunofluorescence Imaging of Rat Tissues

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A series of parallel sections from animals that were perfused with FITC-dextran was chosen (n = 3 rats), washed in PBS and blocked. The tissue was co-incubated in CYP4A1 (RPAP-151, 1:200) or GPR75 (LSA1589; 1:200) and CD13 (ab108310, Abcam; 1:250) or CD13 (sc-13536, Santa Cruz; 1:200) for 72 h at 4°C followed by secondary incubations in Dylight (SA5-10041, Fisher; 1:200) and Dylight 550 donkey anti-goat (ab96932, Abcam; 1:200) or AlexaFluor 555 (A-21428, Fisher; 1:200) and AlexaFluor 647 (ab150075, Abcam; 1:200) for 30 min. When labeling for NG2, the same protocol was followed, but CD13 and respective secondary incubation steps were omitted and replaced by a primary incubation in NG2 (ab50009, Abcam) followed by the secondary incubation in AlexaFluor 647 donkey anti-mouse at similar concentrations, times and temperatures. Immunostaining of aSMA is described above.
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4

Retinal Pericyte and Endothelial Cell Labeling

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The retinas were isolated and fixed in cold 4% PFA for 15 min, washed in PBS for 5-10 min, and blocked in 1% TritonX-100/5% BSA for 30 min at 37 °C. The whole-mount retinas were stained with NG2 antibody (1:100, ab50009, Abcam, USA) overnight at 4 °C. The primary antibody was removed and 1 × PBST (0.1% Tween-20 in 1×PBS, pH 7.4) was used to wash the retinas 4 × 10 min. The retinas were then stained with the Alexa Fluor 594 goat anti-mouse IgG (1:500, A11005, Invitrogen, USA) for 3 h at room temperature to label pericytes. Endothelial cells were labeled by staining Isolectin B4 (IB4, 1:100, L2895, Sigma, USA) for 2 h at room temperature. The staining signaling was captured using a fluorescent microscope (IX73P1F, Olympus, Japan).
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5

Immunohistochemical Analysis of Mouse Eyes

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Mouse eyes were enucleated and then fixed in Karnovsky’s fixative for 2 hr prior to embedding in paraffin wax. Sections were stained with H&E and photographed using an Aperio ScanScope digital scanning system (Leica Biosystems). The eyes for immunohistochemistry were fixed in 4% paraformaldehyde overnight and then infiltrated with 30% sucrose at 4°C before embedding in Polyfreeze medium (Polysciences). Immunolabeling was carried out using 6- to 10-μm-thick frozen sections. The following primary antibodies were used: NG2 monoclonal (1:200, Abcam, ab50009); Ki-67 polyclonal (1:500, Abcam, ab15580); and Alpha B Crystallin (CRYAB) monoclonal (1:200, Abcam, ab13496). Secondary antibodies used were Alexa Fluor 488 goat anti-rabbit immunoglobulin G (IgG) or Alexa Fluor 488 goat anti-mouse IgG (Life Technologies). Sections were incubated overnight at 4°C with primary antibody diluted in blocking buffer. After extensive washes in PBS-Tween-20, localization of antibody labeling was detected after a 1-hr incubation, with secondary antibodies diluted in PBS containing 2% normal goat serum. Nuclei were counterstained with DAPI, and then images were acquired using scanning laser microscopy.
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6

Pericyte Visualization and Kidney Injury Assessment

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Pericytes were labelled by expression of DsRed under control of the NG2 promoter (in mice), or with antibodies to NG2 (1:200; Abcam ab50009, Cambridge, United Kingdom), α-smooth muscle actin (α-SMA) (1:100; Abcam ab5694, Cambridge, United Kingdom), or myosin light chain (phospho S20, 1:100, Abcam ab2480, Cambridge, United Kingdom), and the capillary basement membrane and pericytes were labelledwith isolectin B4-Alexa Fluor 647 (1:200, overnight; Molecular Probes, I32450, Thermo Fisher Scientific, Waltham, MA). Z-stacks of the cortex and outer medulla (frame size 640.17 × 640.17 µm) for cell counting were acquired confocally (Zeiss LSM 700, Oberkochen, Germany). Pericyte intersoma distance was calculated between pairs of pericytes on capillaries within the same imaging plane. Kidney damage was assessed using kidney injury molecule-1 (Kim-1) antibody (1:100, overnight; Novus Biologicals, NBP1-76701, Abingdon, United Kingdom). Red blood cells were labelled with antibody to glycophorin A (1:2000, AbCam ab9520, Cambridge, United Kingdom). Alexa Fluor conjugated secondary antibodies were added overnight (1:500; ThermoFisher, A31572, A31556, A31570, Waltham, MA).
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7

Quantifying Blood-Brain Barrier Permeability

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Confocal microscopy was performed to confirm an increased BBB permeability to Evans Blue dye. Rats were decapitated and the brains were quickly removed, fixed with 4% neutral buffered formalin for 24 h, and cut into 50-µm thick slices on a vibratome (Leica VT 1000S Microsystem, Germany). The slices were incubated for one night with the goat anti-mouse NG2 antibody (1:500; ab 50009, Abcam, Cambridge, United Kingdom) and goat anti-rabbit GFAP antibody (1:500; ab 207165, Abcam, Cambridge, United Kingdom). In the next day, after several rinses in phosphate-buffered saline, the slices were incubated for 1h with 130 µl fluorescent-labeled secondary antibodies (goat anti-mouse IgG (H+L) Alexa Four 647; goat anti-rabbit IgG (H+L) Alexa Four 488; Invitrogen, Molecular Probes, Eugene, Oregon, USA). The slices were analyzed using a confocal microscope (Leica SP5, Germany). Approximately 8–12 slices per animal from cortical and subcortical (excepting hypothalamus and choroid plexus where the BBB is leaky) regions were imaged.
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8

Retinal Vasculature Visualization Protocol

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After the pups were humanly sacrificed, the eyeballs were harvested. Retinas were acquired according to previous study [19 ]. Fixation and dehydration were accomplished with 4% paraformaldehyde (PFA) and 2×phosphate-buffered saline (PBS), respectively. The retina was acquired by discarding the anterior and posterior segments. Before staining, the retina was incubated with methanol and stored at −20°C to increase permeabilization. Staining was conducted according to the manufacturer's protocol. Isolectin-B4 was purchased from Sigma-Aldrich LLC, and primary antibody of NG2 (ab50009) and secondary antibody against mouse (ab150115) were purchased from Abcam plc. Retinas were photographed using a confocal microscopy (Fluoview 1000, Olympus, Tokyo, Japan). In Isolectin-B4 staining, the superficial vascular plexus (SVP) was presented with green, and the inner and outer deep vascular plexus (iDVP, oDVP) were yellow and purple, respectively. A comprehensive illustration of the retinal vasculature was generated and assembled using Adobe Photoshop and Adobe Illustrator (Adobe Systems, San Jose, CA, USA). In Isolectin-B4 and NG2 double staining, vessels were shown as green and NG2 was red.
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9

In Vitro Pericyte-Endothelial Cell Interaction

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The mixtures of CECs and pericytes (at a ratio of 1:1) were suspended in the complete medium and seeded onto the Matrigel-precoated 24-well plate, then incubated at 37 °C in a humidified atmosphere of 5% CO2 for up to 12 h. The harvested cells were fixed in 4% paraformaldehyde for 15 min, washed with PBS, and permeabilized with PBS containing 0.1% Triton X-100 for 30 min. These cells were stained with CD31 (1:200; 550300, BD Pharmingen) and NG2 (1:100; ab50009, Abcam) to identify ECs and pericytes, respectively. The images were observed under an IX73P1F fluorescent microscope (Olympus, Tokyo, Japan). Image J software was used to calculate pericyte coverage.
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10

Choroidal Pericyte Coverage Analysis

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The sprouting choroidal tissue was used for detecting pericyte coverage by immunofluorescence staining. The choroidal explants were gently washed with ice-cold PBS, fixed with 4% paraformaldehyde for 15 min at room temperature, and blocked with 0.1% Triton X-100/3% BSA for 30 min at 37 °C. Pericytes were labeled with NG2 (1:100; ab50009, Abcam) overnight at 4 °C and Alexa Fluor 594 goat anti-mouse IgG (1:500; A11005, Invitrogen) for 3 h at room temperature. ECs were labeled with Isolectin GS-IB4 (1:100; L2895, Sigma, USA) for 2 h at room temperature. The images were captured under a fluorescence microscope (Olympus, Tokyo, Japan). NG2 positive area was measured using the Image J software.
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