The largest database of trusted experimental protocols

Ntegra prima setup

Manufactured by NT-MDT
Sourced in Russian Federation

NTEGRA Prima setup is a modular scanning probe microscope (SPM) system designed for high-resolution imaging and analysis of surface structures. It provides a versatile platform for various scanning probe techniques, including atomic force microscopy (AFM) and scanning tunneling microscopy (STM). The NTEGRA Prima setup offers a flexible and customizable solution for nanoscale investigations across a wide range of applications.

Automatically generated - may contain errors

8 protocols using ntegra prima setup

1

AFM Imaging of Biological Samples

Check if the same lab product or an alternative is used in the 5 most similar protocols
For atomic force microscopy (AFM) imaging, samples were diluted with Milli-Q water (10–20 times) and deposited on freshly cleaved mica. After 15 min, the mica was rinsed with Milli-Q water and dried under a gentle nitrogen stream. Images were recorded in intermittent contact mode in air using an NTEGRA Prima setup (NT-MDT) and a gold-coated single crystal silicon cantilever (NT-MDT, NSG01, spring constant of ∼5.1 N/m) and a resonance frequency of ∼180 kHz. Images were analyzed using the Gwyddion software.
+ Open protocol
+ Expand
2

Atomic Force Microscopy of Protein Aggregates

Check if the same lab product or an alternative is used in the 5 most similar protocols
Samples from aggregation reactions were diluted into Milli-Q water (10–20 times; MilliporeSigma, Burlington, MA) and deposited on freshly cleaved mica. After 10 min, the mica was rinsed with filtered Milli-Q water (MilliporeSigma) and dried under a gentle nitrogen stream. Images were recorded on an NTEGRA Prima setup (NT-MDT, Moscow, Russia) using a gold-coated single crystal silicon cantilever (NT-MDT, NSG01, spring constant of ∼5.1 N/m) and a resonance frequency of ∼180 kHz. Here, 512 × 512-pixel images were acquired with a 0.5-Hz scan rate. Images were analyzed using the WSxM 5.0 software. For each sample, images were taken in at least three different 50 × 50-μm areas; the images shown in the figures are representatives for each sample. For the analysis of the oligomer sizes, flooding analysis was used; particles larger than 2 nm were included in the analysis.
+ Open protocol
+ Expand
3

Atomic Force Microscopy of PV Fibrils

Check if the same lab product or an alternative is used in the 5 most similar protocols
PV fibril samples were diluted with Milli-Q water (10–20 times) and deposited on freshly cleaved mica. After 15 min, the mica was rinsed with Milli-Q water and dried under a gentle nitrogen stream. AFM images were recorded in intermittent contact mode in air using an NTEGRA Prima setup (NT-MDT) and single crystal silicon cantilever (NSG01; TipsNano) with a force constant of ∼5.1 N/m at a resonance frequency of ∼180 kHz. Images were analyzed using Gwyddion software (46 ).
+ Open protocol
+ Expand
4

Visualizing Fibrillar Insulin Structure

Check if the same lab product or an alternative is used in the 5 most similar protocols
For atomic force microscopy, fibrillar insulin was deposited on freshly cleaved mica and left to settle for 5 min, after which the mica plates were rinsed with milli-Q water and dried under a gentle stream of nitrogen. AFM images were recorded on an NTEGRA Prima setup (NT-MDT, Moscow, Russian Federation) equipped with a gold-coated single crystal silicon cantilever (NSG-01, spring constant ~ 5.1 N/m, resonance frequency of ~ 150 kHz). The images were processed in the Gwyddion software package (Nečas and Klapetek 2012 (link)) using planar subtraction, polynomial background subtraction and correction for linear aberrations. For fluorescence microscopy, 150 µl of insulin solution was placed on positively charged glass (Thermo Scientific, Waltham, MA, USA) and sealed with a 18 × 18 mm coverslip. A Zeiss AxioObserver.Z1 inverted fluorescence microscope (Carl Zeiss AG, Oberkochen, Germany) with a 100 × oil immersion objective (NA = 1.46) was used in combination with a Photometrics Evolve EMCCD camera (Photometrics, Tuscon, AZ, USA), 100 ms exposure time, to obtain the images of the samples.
+ Open protocol
+ Expand
5

Atomic Force Microscopy of Amyloid Fibrils

Check if the same lab product or an alternative is used in the 5 most similar protocols
Samples from the ThT aggregation assays at 90 h were diluted 10 times in MilliQ water and deposited onto freshly cleaved mica. After 15 min, the mica samples were rinsed 3–4 times with MilliQ water then dried completely under a gentle stream of nitrogen gas. The images were captured using an NTEGRA Prima setup (NT‐MDT, Moscow, Russia) at a resonance frequency around 180 kHz, using a gold‐coated single crystal silicon cantilever (NSG01, spring constant of ~5.1 N/m; NT‐MDT, Moscow, Russia). Images of 512 pixels were captured at a scan rate ranging from 0.3–0.5 Hz. Images were analyzed using WSxM 5.0 software.
+ Open protocol
+ Expand
6

Atomic Force Microscopy of Amyloid Fibrils

Check if the same lab product or an alternative is used in the 5 most similar protocols
Samples from the ThT aggregation assays at 90 h were diluted 10 times in MilliQ water and deposited onto freshly cleaved mica. After 15 min, the mica samples were rinsed twice with MilliQ water then dried completely under a gentle stream of nitrogen. The images were captured using an NTEGRA Prima setup (NT-MDT, Moscow, Russia) at a resonance frequency around 180 kHz, using a gold-coated single crystal silicon cantilever (NSG01, spring constant of ~5.1 N/m; NT-MDT, Moscow, Russia). Images of 512 pixels were captured at a scan rate ranging from 0.3–0.5 Hz, scanning a minimum of four 50 µm × 50 µm areas in each sample. Images were analyzed using WSxM 5.0 software [60 (link)], with around 60 fibers measured per condition. The images shown in this article are representative for each condition.
+ Open protocol
+ Expand
7

Atomic Force Microscopy of ThT Aggregates

Check if the same lab product or an alternative is used in the 5 most similar protocols
Aggregated samples from ThT experiments were diluted into MilliQ water (10–20 times) and deposited on freshly cleaved mica. After 10 min, the mica was rinsed with filtered Milli-Q water and dried under a gentle nitrogen stream. Images were recorded on an NTEGRA Prima setup (NT-MDT) using a gold-coated single crystal silicon cantilever (NT-MDT, NSG01, spring constant of ~ 5.1 N/m) and a resonance frequency of ~ 180 kHz. 256 pixel images were acquired with 0.5 Hz scan rate. Images were analyzed using the WSxM 5.0 software (Horcas et al. 2007 (link)). For each sample images were collected in at least three different 50 × 50 µm areas, the images shown are representative for each sample.
+ Open protocol
+ Expand
8

Atomic Force Microscopy of Amyloid Fibrils

Check if the same lab product or an alternative is used in the 5 most similar protocols
Aggregated samples from ThT experiments were diluted into MilliQ water (10-20 times) and deposited on freshly cleaved mica. After 10 min, the mica was rinsed with filtered Milli-Q water and dried under a gentle nitrogen stream. Images were recorded on an NTEGRA Prima setup (NT-MDT) using a goldcoated single crystal silicon cantilever (NT-MDT, NSG01, spring constant of ∼5.1 N/m) and a resonance frequency of ∼180 kHz. 512-pixel images were acquired with 0.5 Hz scan rate. Images were analyzed using the WSxM 5.0 software (Horcas et al. 2007) .
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!