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2 protocols using gapdh

1

Antioxidant Enzyme Assay Protocol

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Fructose syrup (55%) was purchased from Chao Khun Agro Products Co., Ltd. (Bangkok, Thailand). Bovine serum albumin (BSA), 5,5-dithiobis-(2-nitrobenzoic acid) (DTNB), glutathione reductase, oxidized glutathione (GSSG), reduced glutathione (GSH), nitrotetrazolium blue chloride (NBT), reduced β-nicotinamide adenine dinucleotide phosphate (NADPH), standard malondialdehyde (MDA), standard superoxide dismutase (SOD) from bovine erythrocytes, 4-vinylpyridine (4-VP), and xanthine oxidase were from Sigma Aldrich (St. Louis, MO, USA). Hydrogen peroxide (H2O2) was obtained from Fisher Scientific (Leicestershire, UK). 2-Thiobarbituric acid (TBA) was supplied by Fluka Chemika Co. (Steinheim, Switzerland). Trizol® was supplied by Invitrogen® (Carlsbad, CA, USA). ReverTraAce® and Taq DNA polymerase were purchased from Toyobo Co., Ltd. (Osaka, Japan) and Vivantis Technologies Sdn. Bhd. (Selangor Darul Ehsan, Malaysia), respectively. The random primers and RNase inhibitor were products of Takara Bio Inc. (Shiga, Japan). The forward and reverse primers for CAT, CuZn-SOD, Mn-SOD, GPx, and GAPDH (Table 1) were synthesized by Bio Basic, Inc. (Markham, Ontario, Canada). All other laboratory chemicals were of the highest available purity from commercial suppliers.
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2

Quantitative Analysis of TGF-β Expression

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Extraction of RNA from formalin-fixed samples and subsequent cDNA synthesis were performed from the tissue of normal esophagus, BE, and cardiac epithelium. PCR reactions were performed in duplicate for each sample, with first strand cDNA synthesis kit (Thermo, RevertAid™). Expression of TGF-β was determined with primers and probe supplied by Applied Biosystems. The target gene expression was normalized against mRNA expression of the housekeeping gene glyceraldehyde-3-phosphate dehydrogenase (GAPDH, Bio Basic Inc.). For each sample under investigation, the amount of target gene mRNA and GAPDH mRNA was determined from a standard curve.
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