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Z devd fmk

Manufactured by Selleck Chemicals
Sourced in United States, China

Z-DEVD-FMK is a caspase-3 inhibitor, a type of enzyme that plays a critical role in the process of apoptosis, or programmed cell death. This product is a synthetic compound that can be used in research applications to study the role of caspase-3 in various biological processes.

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36 protocols using z devd fmk

1

Sorafenib and Autophagy Modulation in Cancer

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Sorafenib (Sf) (Selleckchem, Houston, TX) was used at different concentrations at micromolar scale. Doxercalciferol (1-hydroxyvitamin D2; D2) (Sigma-Aldrich, St. Louis, MO) was used at the final concentration of 100 nM. Carnosic acid (CA) (Enzo Life Sciences Inc., Farmingdale, NY) was used at the final concentration of 10 μM (7 (link),27 (link)). Autophagy inhibitor chloroquine (Sigma) was used at 10 μM and caspase 3 inhibitor Z-DEVD-FMK (Selleckchem) at final concentration of 1 μM. The following antibodies were used for Western blotting: Beclin1 (#3738), Cleaved Caspase 3 (#9661), Capase 9 (#9502), Atg3 (#3415), p62 (Cat#39749S), LC3I/II (#12741) and HRP-linked anti-rabbit (#7074) antibodies were purchased from Cell Signaling Technologies (Danvers, MA). The loading control for Western blotting β-actin antibody was purchased from Sigma-Aldrich. Propidium Iodide Nucleic Acid Stain kit was purchased from Invitrogen (Carlsbad, CA).
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2

Cytokine and Hepcidin Regulation Analysis

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The ELISA kit for analysis of human hepcidin was purchased from CUSABIO (College Park, MD, USA). ELISA kits for human TNF-α, IL-17, and IFN-γ were all purchased from BioLegend (San Diego, CA, USA). The RNeasy kit was purchased from Qiagen (Valencia, CA, USA). SYBR PrimeScript RT reagent kits were purchased from TaKaRa (Dalian, China). Dulbecco's Modified Eagle's Medium (DMEM), fetal bovine serum (FBS), penicillin (100 U/mL) and streptomycin (100 g/mL), L-gentamycin, and 2-ME were all purchased from HyClone (Logan, UT, USA). Human normal LO2 hepatocytes and human liver-derived hepatoma G2 cells (HepG2) were purchased from the Chinese Academy of Sciences Committee Type Culture Collection cell bank (Shanghai, China). The CCK-8 kit was purchased from the Shanghai Yeasun Biotechnology Company, Ltd. (Shanghai, China). The JNK inhibitor (JNK-IN-8, 10 μM), NF-κB inhibitor (BAY 11-7082, 10 μM), and caspase-3/8 inhibitor (Z-DEVD-FMK, 50 μM) were purchased from Selleckchem (Shanghai, China).
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3

Cell Viability Assay with Apoptosis Inducers

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Cells were plated and incubated at 37°C and 5% CO2 in DMEM containing 2% FBS. After 20 h, each compound was added at the indicated concentration and for the indicated times. Compounds used in vitro experiments were purchased from Selleckchem (Houston, TX): obatoclax; ABT-737; staurosporine; zVAD-FMK; zDEVD-FMK; and dinaciclib. For the in vivo test, ABT-737 was purchased from AstaTech Inc. (Bristol, PA).
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4

Evaluating EGFR Expression in Lapatinib-Treated Breast Cancer Cells

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MDA-MB-468 cells were plated in 12-well cluster plates and the following day were left untreated (control) or treated with lapatinib, Th1 cytokines, or both. Twenty-four hours later 50μM of Z-DEVD-FMK (Selleckchem) was added to some groups to suppress caspase 3 activity. All cells were harvested after 72 hours total culture time and stained with EGFR/HER-1 antibody conjugated to PE/Dazzel 594 (Biolegend). Flow cytometry was performed using a Flowcyte device (Amnis-Millipore) employing a488nm excitation laser and results analyzed via Ideas software suite.
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5

Evaluating Apoptosis Inhibitor Efficacy

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The inhibitors, z-vad-fmk, z-devd-fmk, and Ac-devd-cho, were purchased from Selleckchem (Houston, TX, USA; Catalog No. S7023, S7312, S7901). z-vad-fmk and z-devd-fmk were first dissolved in DMSO and then diluted in culture medium to achieve the final concentrations, as indicated in figure legends. Ac-devd-cho was first dissolved in ddH2O and then diluted with culture medium to achieve the final concentrations, as indicated in figure legends. Cells were either transferred to the diluted solution immediately post electrotransfer, or kept in the pulsing buffer at room temperature for 5 min, then transferred to the solution. Thereafter, the cells were cultured normally for 24 h before being analyzed.
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6

Bile acid effects on cell proliferation

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Cells (3000 cells/well) were seeded in 96‐well plates overnight and treated with different doses of CA, DCA and LCA (Sigma‐Aldrich, St. Louis, MO) and with or without caspase inhibitors (Z‐VAD‐FMK and Z‐DEVD‐FMK), necroptosis inhibitors (necrostatin‐1) (Selleck, Shanghai, China) or β‐catenin agonist (Wnt‐3A) (R&D Systems, Minneapolis, MN). Cell proliferation was determined by cell counting kit‐8 (CCK‐8) assays (Dojindo, Kumamoto, Japan) in accordance with the manufacturer's instructions. The optical density (OD) at 450 nm was tested using BioTek ELx800 microplate reader (BioTek, Winooski, VT). All assays were performed in triplicate.
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7

Pharmacological Modulation of Inflammatory Pathways in CLP Rats

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The CLP rats were injected with 150 ng/g ODN2088 (agonist of TLR9, InvivoGen, San Diego, CA, USA), 50 ng/g SB203580 (inhibitor of p38 MApK, Cell Signaling Technology, Beverly, MA, USA), 75 ng/g PD98059 (inhibitor of ERK, Cell Signaling Technology), 150 ng/g SP600125 (inhibitor of JNK, Cell Signaling Technology), 100 ng/g Z-DEVD-FMK (inhibitor of apoptosis, Selleck, Houston, TX, USA), 12.5 ng/g INF39 (inhibitor of pyroptosis, Selleck), 37.5 ng/g Nec-1s (inhibitor of necroptosis, Cell Signaling Technology), and 1% dimethyl sulfoxide (DMSO) (vehicle, Sigma-Aldrich, St. Louis, MO, USA).[22 (link)–28 (link)]
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8

Pyroptosis Pathway Modulation Assay

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Cobalt chloride (Cat# 232696) and N-acetyl-L-cysteine (Cat# A9165) were purchased from Sigma-Aldrich (St. Louis, MO, USA). The caspase inhibitors Ac-YVAD-CMK (Cat# S9727) and Z-DEVD-FMK (Cat# S7312) were purchased from Selleck Chemicals (Houston, TX, USA). The antibodies against HIF-1α (Cat# 36169), Bax (Cat# 2772), B-cell lymphoma-2 (Bcl-2; Cat# 3498), caspase-1 (Cat# 3866), cleaved caspase-1 (Cat# 4199), caspase-3 (Cat# 9662), cleaved caspase-3 (Cat# 9661), cleaved caspase-7 (Cat# 9491), caspase-9 (Cat# 9502), PARP (Cat# 9532), GSDMD (Cat# 97558), IL-1β (Cat# 12242), IL-18 (Cat# 54943), and α-tubulin (Cat# 2125) were purchased from Cell Signaling Technology (Danvers, MA, USA). The antibody against caspase-7 (Cat# sc-28295) was obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). The antibodies against NLRP3 (Cat# ab263899) and GSDME (Cat# ab215191) were purchased from Abcam (Cambridge, MA, USA).
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9

Cytotoxicity Assay of V13 and δVFH

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The cytotoxicity assay was performed as reported previously.42 Briefly, the PMA-pretreated THP-1 cells were incubated with V13 or δVFH at different concentrations (15.625–1000 nM). In the case where a specific inhibitor was used, the cells were pretreated with the inhibitor for 1 h and then treated with V13 or δVFH as above. The inhibitors included MCC950 (50 μM) (PZ0280, Sigma), Nec-1s (50 μM) (S8641, Selleck), Z-DEVD-FMK (50 μM) (S7312, Selleck), Ac-YVAD-CMK (50 μM) (SML0429, Sigma), NSA (20 μM) (S8251, Selleck), and BAPTA-AM (50 μM) (S7534, Selleck) targeting NLRP3, RIPK1, caspase 3, caspase 1, GSDMD, and Ca2+, respectively. After treatment, the cells were observed with a microscope (Ti-S/L100, Nikon, Japan), and lactate dehydrogenase (LDH) release was measured with the CytoTox 96 Non-Radioactive Cytotoxicity Assay kit (G1780, Promega) according to the manufacturer’s instruction. Briefly, the supernatant of the cells was transferred to a 96-well plate. An equal volume of CytoTox 96 Reagent was added to each well. The plate was incubated for 30 min at room temperature. Stop Solution was then added to the plate, and absorbance at 490 nm was determined with a microplate reader (Synergy H1, BioTek, USA).
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10

PRL3 Inhibition and Apoptosis Suppression

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PRL3 activity was inhibited using rhodanine derivative PRL3 inhibitor (P0108, Sigma-Aldrich, St. Louis, Missouri). Cell apoptosis was inhibited using caspase-3 (Z-DEVD-FMK, S7312, Selleck Chemicals, Houston, TX) and pan-caspase (Z-VAD-FMK, Selleck S7023) small molecules at 50uM.
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