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Dulbecco s modified essential medium

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Dulbecco's modified essential medium (DMEM) is a cell culture medium commonly used to support the growth of various cell types, including mammalian cells. It is a balanced salt solution that provides essential nutrients, vitamins, and other components required for cell maintenance and proliferation.

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50 protocols using dulbecco s modified essential medium

1

Isolation of Primary Dermal Fibroblasts

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Primary Dermal Fibroblasts Mouse dermal fibroblasts were isolated, as previously described, and used in experiments up to passage 6. 50, 67 Briefly, the entire trunk skin of postnatal day 3 C57BL/6N mice and dKO mice was removed and incubated overnight at 37 C with 0.05% trypsin (15090-046; Life Technologies)-EDTA (0.02%) in PBS. On manual detachment from the epidermis, the dermis was minced and cells were liberated by incubation with Dulbecco's modified essential medium (41965; Life Technologies) containing collagenase I (400 U/mL; LS004196; Worthington, Lakewood, NJ) for 1 hour at 37 C. Debris was removed by straining through 70-mm filters (352350; BD Falcon, Heidelberg, Germany), and the cells isolated from one mouse were plated on a 10-cm dish in Dulbecco's modified essential medium supplemented with 10% fetal calf serum (10270; Life Technologies), 2 mmol/L L-glutamine (K0283; Biochrom, Berlin, Germany), and 10,000 U/mL penicillin and 10,000 mg/mL streptomycin (A2213; Biochrom).
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2

Culturing Thyroid Cancer Cell Lines

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WRO (follicular thyroid carcinoma) cell line was maintained in Dulbecco’s modified essential medium (DMEM) supplemented with 10% fetal bovine serum (FBS) (Life Technologies, Grand Island, NY). FTC 133 (follicular thyroid carcinoma) was maintained in DMEM and Hamŕs F12 (1:1 mixture) supplemented with 10% FBS (Life Technologies). FTC 236 (follicular thyroid carcinoma) was maintained in DMEM and Hamŕs F12 medium (1:1 mixture) supplemented with 10% FBS (Life Technologies), thyroid stimulating hormone (TSH 1 mU/mL) and insulin (10 μg/mL) (Sigma-Aldrich, St. Louis, MO). FTC 238 (follicular thyroid carcinoma) was maintained in DMEM and Hamŕs F12 (1:1 mixture) supplemented with 5% FBS (Life Technologies). TPC1 (papillary thyroid carcinoma) was maintained in RPMI supplemented with 10% FBS (Life Technologies). PCCL3 cell line (normal rat thyroid) was maintained in Ham’s F12 medium (Life Technologies) supplemented with 5% FBS, TSH (1 mU/mL), hydrocortisone (10 ng/mL), transferrin (5 μg/mL) and insulin (10 μg/mL) (Sigma-Aldrich). All cell lines were maintained in a 5% CO2 and 37°C humidified incubator.
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3

Antisense Oligonucleotide Modulation of CADM1 and ANK3

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SH-SY5Y cells (ATTC, CRL-2266) were cultured at 37°C, 5% CO2 in Dulbecco’s Modified Essential Medium (Life technologies, US) supplemented with 10% Fetal Bovine Serum. For all treatments in this cell line, cells were seeded to be 70-80% confluent at the day of transfection in 6-well plates.
For antisense oligonucleotide (AON) treatment, cells were transfected at 24 hr with 10 μM of stated AON using Endo-porter transfection reagent (Gene-tools, US) as per manufacturers instructions. At 48 hr post-transfection cell media was removed and cells lysed and RNA extracted with Qiazol. All AONs were purchased from Gene-tools, US, and carried morpholino modifications. Sequences used were:
CADM1:
AON NS:CCTCTTACCTCAGTTACAATTTATA
AON-A1:AGCACACATGAGAAGTATGACTTAC
AON-A2:ATCCAAGCATAAGATTGTCACTTAC
ANK3:
AON NS:CCTCTTACCTCAGTTACAATTTATA
AON-A1:TTTAAAATGGAAAACCAGCACTTAC
AON-A2:AATGGCCAATGCCAAGTTCACTTAC
For cycloheximide treatment after AON-A2 transfection, cells were seeded to be 50-70% confluent at the day of transfection and were treated at 48 hr (first experiment) or 36 hr (second experiment) with either 100 μg/ml of cycloheximide dissolved in DMSO, or an equivalent volume of DMSO alone. At 6 hr post-treatment cell media was removed and cells lysed and RNA extracted using Qiazol (Qiagen, US).
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4

Isolation and Expansion of Fetal and Adult MSCs

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Fetal livers were obtained by dissection and collected in 1 mL of MSC media consisting of Dulbecco’s modified essential medium low glucose, 10% fetal bovine serum, 1% L-glutamine (all Life Technologies, CA, USA), and 1% Antibiotic-Antimycotic (100×, Gibco, Sigma-Aldrich, Missouri, USA), as previously described [18 (link)]. The aMSCs were isolated from 10 to 20 mL bone marrow aspirates and expanded as previously described [19 (link)], using the same MSC media as used for fMSCs. For the experiments in this study, the fetal and adult MSCs were in Passage (P) 5–8. After isolation, the MSCs were plated at 4000 cells/cm2.
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5

Antisense Oligonucleotide Modulation of CADM1 and ANK3

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SH-SY5Y cells (ATTC, CRL-2266) were cultured at 37°C, 5% CO2 in Dulbecco’s Modified Essential Medium (Life technologies, US) supplemented with 10% Fetal Bovine Serum. For all treatments in this cell line, cells were seeded to be 70-80% confluent at the day of transfection in 6-well plates.
For antisense oligonucleotide (AON) treatment, cells were transfected at 24 hr with 10 μM of stated AON using Endo-porter transfection reagent (Gene-tools, US) as per manufacturers instructions. At 48 hr post-transfection cell media was removed and cells lysed and RNA extracted with Qiazol. All AONs were purchased from Gene-tools, US, and carried morpholino modifications. Sequences used were:
CADM1:
AON NS:CCTCTTACCTCAGTTACAATTTATA
AON-A1:AGCACACATGAGAAGTATGACTTAC
AON-A2:ATCCAAGCATAAGATTGTCACTTAC
ANK3:
AON NS:CCTCTTACCTCAGTTACAATTTATA
AON-A1:TTTAAAATGGAAAACCAGCACTTAC
AON-A2:AATGGCCAATGCCAAGTTCACTTAC
For cycloheximide treatment after AON-A2 transfection, cells were seeded to be 50-70% confluent at the day of transfection and were treated at 48 hr (first experiment) or 36 hr (second experiment) with either 100 μg/ml of cycloheximide dissolved in DMSO, or an equivalent volume of DMSO alone. At 6 hr post-treatment cell media was removed and cells lysed and RNA extracted using Qiazol (Qiagen, US).
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6

Culturing Huh7 and HepG2 Cells

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Huh7 and HepG2 cells were obtained from the American Type Culture Collection (Rockville, Maryland, USA). Both cell lines were cultured in Dulbecco's modified essential medium (Life Technologies, Carlsbad, California, USA) supplemented with 10% heat‐inactivated fetal calf serum (Life Technologies) and 100 U/mL penicillin and 100 μg/mL streptomycin sulfate (Life Technologies) in a humidified incubator with 5 % CO2 at 37°C.
For experimental conditions, Interferon (IFN)‐alpha (IFN‐α), IFN‐gamma (IFN‐γ), N'‐hydroxy‐N‐phenyloctanediamide (SAHA) as well as ionomycin and phorbol 12‐myristate 13‐acetate (PMA) were obtained from Sigma‐Aldrich (St. Louis, Missouri, USA) and dissolved as described by manufacturer's instructions.
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7

U87 Cell Culture Protocol

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U87 cells grew (37 °C, 5 % CO2) in Dulbecco’s modified essential medium (Life Technologies) supplemented with 10 % heat-inactivated fetal calf serum (PAA), 100 U/ml penicillin (PAA), 100 μg/ml streptomycin (PAA), and 1 % NEAA (Life Technologies).
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8

Cell Culture Conditions for Breast Cancer

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MDA‐MB‐468 and MDA‐MB‐231 cells were maintained in Dulbecco's modified essential medium (Life Technologies, Carlsbad, CA, USA) supplemented with 1% penicillin‐streptomycin solution (Life Technologies) and 10% fetal bovine serum (HyClone, Logan, UT, USA). T47D cells were cultured in RPMI 1640 medium (Gibco, Grand Island, NY, USA) supplemented with 1% penicillin‐streptomycin solution and 10% fetal bovine serum. MCF10A cells were maintained in DMEM/F12 media with 10% horse serum, 100 ng/mL cholera toxin, 20 ng/mL epidermal growth factor (EGF), 500 ng/mL hydrocortisone, 0.01 mg/mL insulin and 1% penicillin‐streptomycin solution. In the current study, all cell lines used were all origin from ATCC and used within 6 months after authenticated via the short tandem repeat (STR) typing.
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9

Radioresistant Cancer Cell Preparation

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Three cancer cell types were studied in the present study: highly radioresistant U87 glioblastoma cancer cells, radioresistant SkBr3 breast cancer cells and relatively less radioresistant HeLa cervix cancer cells. U87 and HeLa cells were obtained from ATCC (American Type Culture Collection, Manassas, VA, USA). SkBr3 was commercially available and used for several SMLM studies in our laboratory. U87 and HeLa cells were grown in Dulbecco’s modified essential medium (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with 10% heat-inactivated fetal calf serum (Thermo Fisher Scientific, Waltham, MA, USA), 100 U/mL penicillin (PAA), 100 μg/mL streptomycin (PAA), and 1% NEAA (Thermo Fisher Scientific, Waltham, MA, USA). Cell cultures were kept in T-25 cell flasks at 37 °C in a humidified atmosphere with 5% CO2.
For the experiments with SMLM, SkBr3 cells were prepared as described in detail elsewhere [72 (link)]. SkBr3 cells were grown in McCoy’s 5A cell medium, containing 10% fetal bovine serum (FBS) and 1% penicillin/streptomycin. Cells were cultivated and maintained at 37 °C in a humidified atmosphere at 95% air/5% CO2. Then, the cells were trypsinized and transferred to coverslips, put into six-well plates and further cultivated (about three passages, i.e., about 38 h) until 80% confluence.
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10

Mesenchymal Stem Cell Culture and Nanomaterial Interaction

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Human mesenchymal stem cells (hMSCs) were purchased from a commercial source (Lonza Biologics, Slough, UK) and expanded up to passage number 3. These cells were derived from human bone marrow of a Caucasian female aged 29. hMSCs were cultured in Alpha Minimum Essential medium (Invitrogen, Carlsbad, CA) supplemented with 20% fetal bovine serum (FBS) and 1% Antibiotic-Antimycotic (Thermo Fisher Scientific, East Grinstead, UK). Human umbilical vein endothelial cells (HUVECs) were cultured in endothelial basal medium supplemented with EGM2 SingleQuot Kit supplement and growth factors. HeLa cells were cultured in Dulbecco’s modified essential medium (Thermo Fisher Scientific) supplemented with 10% fetal calf serum and 1% Antibiotic-Antimycotic. Cells were cultured at 37°C and 95% air/ 5% CO2 with the medium being changed every other day.
For fixed cell experiments, media was aspirated and samples were washed with phosphate buffered saline (PBS, Invitrogen) before fixing with 3.7% paraformaldehyde solution after 6 h of culture on nanoneedle arrays (NNAs). For visualization under an upright microscope, cells were incubated with 0.5μg/ml of wheat germ agglutinin (WGA) Alexafluor 488 Conjugate (Thermo Fisher Scientific) for 10 min and washed in PBS. For live experiments, cells were stained with WGA and then supplemented with Lebovitz-15 media at 37°C (Thermo Fisher Scientific).
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