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6 protocols using anti mouse antibody

1

REG4 Protein Expression Analysis

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Cells at a concentration of 1 × 105 cells/mL were plated into a 6-well dish. After 3 days of incubation, cells in each well were lysed with lysis buffer at 4 °C for 30 min. The lysates were loaded and analyzed using SDS-PAGE following standard protocols. Primary antibodies used were anti-REG4 antibody (1:500, Abcam, Cambridge, UK) and anti-Actin antibody (1:1000, Proteintech, Wuhan, China). Secondary antibodies used were anti-mouse antibodies (1:1000, Proteintech, Wuhan, China) and anti-rabbit antibodies (1:1000, Proteintech, Wuhan, China).
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2

Rg3 Modulates NF-κB Signaling in Cancer Cells

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Dulbecco’s modified Eagle’s medium (DMEM), fetal bovine serum (FBS), TRIzol and Lipofectamine™ 2000 reagents were purchased from Invitrogen (Camarillo, CA, USA). Rg3 was provided by Dalian Fusheng Pharmaceutical Co., Ltd. (Dalian, China). It was diluted with cell culture media to final concentration. Cell Counting kit-8 (CCK-8) was purchased from Dojindo Laboratories (Kumamoto, Japan). Annexin V/FITC kit was purchased from Nanjing KeyGen Biotech Co., Ltd. (Nanjing, Jiangsu, China). Antibodies specific for PARP, caspase-3, -8, -9, Bcl-2, survivin, Bax, FUT4, β-actin, HRP-conjugated anti-rabbit and anti-mouse antibodies were purchased from Proteintech Group (Wuhan, China). Antibodies specific for p-p65, p65, pIκBα, IκBα, pIKKα/β and IKKα/β were purchased from Cell Signaling Technology (Boston, MA, USA). p65 siRNA was purchased from the Shanghai GenePharma Co. (Shanghai, China). NF-κB inhibitor (Bay 11-7082) was purchased from Selleck Chemicals (Houston, TX, USA). Nuclear extract kit and EMSA kit were purchased from Thermo Fisher Scientific (Waltham, MA, USA). ChIP kit was purchased from Millipore (Billerica, MA, USA). The enhanced chemiluminescence (ECL) assay kit was purchased from Amersham Biosciences (Pittsburgh, PA, USA).
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3

Analyzing p53 and Cell Cycle Regulators

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Cells were washed with phosphate buffered saline (PBS, 137 mM NaCl, 2.7 mM KCl, 10 mM Na2HPO4, 1.8 mM KH2PO4, pH 7.4) and lysed in radioimmunoprecipitation assay (RIPA) buffer (20 mM Tris-HCl, 1% NP-40, 0.25% deoxycholic acid, 150 mM NaCl, 1 mM EDTA) containing 1 mM PMSF and 1x protease inhibitor (539134, Calbiochem). Total cell lysates were then collected by sonication of the cells followed by centrifugation at 16,000g for 5 min at 4 °C. Total cell lysates (30–50 μg) were separated by SDS-PAGE and then transferred onto nitrocellulose membranes. The membranes were hybridized with anti-p53 (Proteintech Group), anti-p53-S15 (Cell Signaling Technology), p53-T18 (GeneTex, Inc), p53-T55 (Abcam), p53-T81 (Cell Signaling Technology), p53-T155 (Santa Cruz Biotechnology, Inc), anti-Cdc25B (Cell Signaling Technology), anti-Cdk1 (Santa Cruz Biotechnology, Inc), anti-pCdk1-Y15 (Abcam), anti-p27 (GeneTex, Inc), anti-p21 (Cell Signaling Technology), anti-p16 (Proteintech Group), anti-pRB (S780, Cell Signaling Technology), or anti-RB (Proteintech Group). Horseradish-peroxidase-conjugated donkey anti-rabbit (GE Healthcare Life Sciences) or anti-mouse antibodies (Proteintech Group) were used as the secondary antibodies. The T-Pro LumiLong Plus Chemiluminescent Substrate Kit (T-Pro Biotechnology) was used to visualize the antibody-bound proteins.
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4

Western Blot Analysis of Cellular Proteins

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Cell samples were lysed using radioimmunoprecipitation assay (RIPA) buffer (Beyotime, Shanghai, China) supplemented with phenylmethylsulfonyl fluoride (PMSF) (Beyotime, Shanghai, China) and total protein was extracted. The total protein samples were separated by electrophoresis in SDS-polyacrylamide gels and then transferred to NC membranes (Pall Corporation, East Hills, NY, USA). After blocking the membrane in 5% skim milk for 2 h, the primary antibody was incubated overnight (4 °C) and the secondary antibody was incubated at room temperature for 1 h. Protein bands were exposed with chemiluminescent reagents (Thermo, Waltham, MA, USA). An anti-α-Tubulin antibody was used as the loading control. The protein expression was quantified using ImageJ (https://imagej.nih.gov/ij/, accessed on 18 June 2021). The following primary antibodies were used: CDC10 (1:1000, Abcam), CyclinD1 (1:500, Proteintech), CyclinB1 (1:500, Proteintech), α-Tubulin (1:1000, Proteintech), C/EBPα (1:500, Proteintech), and PPARγ (1:500, Proteintech). The secondary antibodies were anti-rabbit (1:10,000, Proteintech) and anti-mouse antibodies (1:10,000, Proteintech). The targeted proteins were detected using the Tanon-5200 (Tanon, Shanghai, China) instructions of the manufacturer.
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5

m6A RNA Immunoblotting Protocol

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Total RNAs were spotted onto N+ nylon membranes (GE Healthcare, MD, USA). After ultraviolet cross-linking, the membranes were blocked with 5% fat-free milk in TBST for 1 h and then incubated with an anti-m6A antibody (1:1000, Proteintech, Wuhan, China) overnight at 4 °C. After washing, the membranes were incubated with an anti-mouse antibody (1:5000, Proteintech, Wuhan, China) for 1 h at 25 °C. After further washing, the membranes were incubated with enhanced ECL detection reagent (Biology, Wuhan, China) and visualized using a detection system. After washing, the membranes were stained with 0.2% methylene blue as a control.
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6

Western Blot Protein Detection Protocol

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The samples were electrotransferred to polyvinylidene fluoride membranes (Millipore) at 90 V for 1 h at 4 °C after SDS-PAGE. The membranes were incubated with methyl alcohol for 3 min and washed for 3 min with the transfer buffer (25 mM Tris, 192 mM glycine). Then, the membranes were blocked by 5% nonfat milk at room temperature for 1 h. After blocking, the membranes were incubated with primary antibodies, anti-Flag antibodies (Proteintech Company) for Tom20 and Tom22, or anti-Strep antibodies (Proteintech) for Su9-TEV-DHFR-EGFP and DHFR-EGFP, at room temperature for 1 h with a 2,000× dilution. Then the membranes were washed by TBS-T buffer (150 mM NaCl, 10 mM Tris, 10% Tween-20). The secondary antibody, anti-mouse antibody (Proteintech), was incubated with the membranes at room temperature for 1 h with a 10,000× dilution. After thorough washing, the protein bands were visualized by Western Quick Block Kit (GenScript) on Chemidoc MP (BIO-RAD).
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