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6 protocols using bca pierce bca protein assay kit

1

Glucose Uptake Measurement Protocol

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Na2SO4 from Laboratoire MAT (Quebec City, QC, Canada), 1.0 M NaOH and HCl solutions as well as acetonitrile optima® LC/MS were provided from Fisher Scientific (Montréal, QC, Canada). Trifluoroacetic acid (TFA) was obtained from J.T. Baker (Phillipsburg, NJ, USA) and KCl was purchased from ACP Inc (Montreal, QC, Canada). Fetal Bovine Serum (FBS) and trypsin (0.25% solution) were obtained from Invitrogen (Burlington, ON, Canada). Nylon filters were from Mandel Scientific (Guelph, ON, Canada). 2-déoxy-D-glucose (nonradioactive), CaCl2, Hepes-Na and MgSO4 were obtained from Sigma Aldrich (Oakville, ON, Canada), NaCl from VWR international (Montreal, QC, Canada). D-2-deoxy-[3H] glucose (radioactive) from Perkin Elmer (Woodbridge, ON, Canada). Finally, Pierce® BCA Protein Assay Kit BCA, from Pierce Biotechnology (Rockford, IL, USA).
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2

Glucose Uptake in L6 Muscle Cells

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KCl was obtained from ACP Inc (Montreal, QC, Canada) and Na2SO4 from Laboratoire MAT (Québec city, QC, Canada). Formic acid, 1.0 M HCl, and 1.0 M NaOH solutions were from Fisher Scientific (Montreal, QC, Canada), trifluoroacetic acid was purchased from J.T. Baker (Phillipsburg, NJ, USA). NaCl, Acetonitrile optima® liquid chromatography-mass spectrometry (LC/MS), and water grade were from VWR international (Montréal, QC, Canada). Concerning the glucose uptake experiments, the alpha-Minimal Essential Medium (α-MEM), Fetal Bovine Serum (FBS), and trypsin (0,25% solution) were obtained from Invitrogen (Burlington, ON, Canada). The 2-déoxy-D-glucose (non-radioactive), CaCl2, Hepes-Na, and MgSO4 were purchased from Sigma Aldrich (Oakville, ON, Canada). D-2-deoxy-[3H] glucose was from Perkin Elmer (Woodbridge, ON, Canada) and Pierce® BCA Protein Assay Kit BCA was from Pierce Biotechnology (Rockford, IL, USA). Insulin was from CHUL’s pharmacy (Québec, QC, Canada). Also, the L6 skeletal muscle cells line, derived from neonatal rat thigh skeletal muscle, were provided by Dr. A. Klip, Hospital for Sick Children (Toronto, ON, Canada).
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3

Hippocampal Protein Extraction and SDS-PAGE

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The hippocampus was removed and placed in 400 μl of RIPA
lysis buffer (10 mM Tris-Cl pH 8.0, 1 mM EDTA, 0.5 M EGTA, 1% Triton X-100,
0.1% sodium deoxycholate, 0.1% SDS, 140 mM NaCl). The tissue was homogenized
on ice, incubated for 30 min on ice, and then centrifuged at 20,000 ×
g for 10 min at 4 °C. The supernatant was
transferred to a new microcentrifuge tube and stored at −80 °C
until processing. The Compat-Able™ Protein Assay Preparation Reagent
Kit (Thermo Scientific ™) was used to eliminate EGTA as an
interfering substance for the BCA Pierce TM BCA Protein Assay Kit (Thermo
Scientific ™). Protein was separated by SDS-PAGE using the
4–15% Criterion™ TGX™ Precast Midi Protein Gel,
18-well, 30 uL (Bio-Rad) ran at 120V for 75 min. The gel was stained using
Coomassie Blue staining (Bio-Rad). The samples were then sent to the UAMS
Proteomics Core for further processing for mass spectrometry.
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4

Hippocampal Protein Extraction and Analysis

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One day after the last MnBuOE injection, a small cohort (n = 4 per) were sacrificed for immediate protein analysis. The hippocampus was removed and placed in 400 µl of RIPA lysis buffer (10 mM Tris-Cl pH 8.0, 1 mM EDTA, 0.5 M EGTA, 1% Triton X-100, 0.1% sodium deoxycholate, 0.1% SDS, 140 mM NaCl). The tissue was homogenized on ice, incubated for 30 min on ice, and then centrifuged at 20,000× g for 10 min at 4 °C. The supernatant was transferred to a new microcentrifuge tube and stored at −80 °C until processing. The Compat-AbleTM Protein Assay Preparation Reagent Kit (Thermo Fisher Scientific Waltham, MA, USA) was used to eliminate EGTA as an interfering substance for the BCA Pierce TM BCA Protein Assay Kit (Thermo Fisher Scientific, Waltham, MA, USA). Protein was separated by SDS-PAGE using the 4–15% Criterion™ TGX™ Precast Midi Protein Gel, 18-well, 30 µL (Bio-Rad, Hercules, CA, USA) ran at 120V for 75 min. The gel was stained using Coomassie Blue staining (Bio-Rad, Hercules, CA, USA). The samples were then sent to the UAMS Proteomics Core for further processing for mass spectrometry.
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5

Hippocampal Tissue Extraction and Protein Quantification

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The hippocampus was removed and placed in 400 µL of RIPA lysis buffer (10 mM Tris-Cl pH 8.0, 1 mM EDTA, 0.5 M EGTA, 1% Triton X-100, 0.1% sodium deoxycholate, 0.1% SDS, 140 mM NaCl). The tissue was homogenized on ice, incubated for 30 min on ice, and then centrifuged at 20,000 × g for 10 min at 4°C. The supernatant was transferred to a new microcentrifuge tube and stored at −80°C until processing. The Compat-Able™ Protein Assay Preparation Reagent Kit (Thermo Scientific™) was used to eliminate EGTA as an interfering substance for the BCA Pierce TM BCA Protein Assay Kit (Thermo Scientific™).
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6

Cell Lysis and Protein Extraction Protocol

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Cells cultured in T-25 flasks were washed three times with Dulbecco’s phosphate-buffered saline (Gibco 14190250) to completely remove culture media. Cells were lysed with cell lysis buffer (Sigma, C3228) supplemented with a protease inhibitor (Thermo Fisher Scientific, 78429). Cells were harvested by scraping and maintained on ice over a rocker for 30 min. Then, the samples were centrifuged at 10,000 g for 10 min at 4°C. The protein samples were then collected and quantified using the BCA pierce TM BCA Protein Assay kit (Thermo Fisher Scientific, 23225).
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