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5 protocols using pparg

1

Immunohistochemical Analysis of SCARB1, PPARG, and ADFP

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FFPE sections of 4 µm thickness were stained with the following immunohistochemistry (IHC) stains: SCARB1 (1:200; Abcam, Cambridge, UK), PPARG (1:300; Abcam, Cambridge, UK), and adipose differentiation-related protein (ADFP) (1:200; Sigma-Aldrich, St. Louis, MO, USA). IHC staining was performed with a Ventana BenchMark GX (Roche Diagnostics). Antigen retrieval was performed by CC1 antigen retrieval solution (Roche Diagnostics) for 30 minutes. Specimens were incubated with primary antibody for 32 minutes, followed by visualization with the ultraView Universal DAB Detection Kit (Roche Diagnostics) for 12 minutes. Sections were counterstained with hematoxylin, dehydrated, and coverslipped. ADFP is the structural component of lipid droplets, which is required for the formation and maintenance of lipid storage droplets.10 (link) ADFP immunostaining is helpful in distinguishing sebaceous carcinoma from other neoplasms with overlapping histology.11 (link) Interpretation of SCARB1 staining was done by semiquantitative scoring as follows: negative (0) = 0% to 1% of cells positive, weak (1) = 1% to 25% of cells positive, moderate (2) = 26% to 50% of cells positive, and strong (3) = 51% to 100% of cells positive.12 (link) Interpretation of PPARG staining was done by semiquantitative scoring as follows: negative (0), weak (1), moderate (2), and strong (3).13 (link)
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2

Immunofluorescence Analysis of BMSC Lineage

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To observe the expression level of osteogenic-related genes and adipogenic-related genes of BMSCs, we conducted immunofluorescence staining according to the standard protocols. First, cells grown on sterile glass coverslips were washed by PBS gently. After fixation by 4% PFA for 30 min at room temperature, the cells were permeabilized by 0.4% Triton X-100 (Biosharp, China) for 30 min and blocked in the presence of 5% normal goat serum (Biosharp, China) for 30 min. Next, the cells were incubated with primary antibodies against RUNX2 (1:1,000; Abcam, UK) or PPARG (1:1,000; Abcam, UK) at 4°C overnight with gentle shaking. Then, the cells were incubated with the specified secondary antibodies for 1 h at room temperature in a dark room. Finally, the nuclei were counterstained with DAPI (Solarbio, China). Images were captured with a fluorescence microscope (Olympus, Japan) equipped with proper filters. Images were captured in 10 randomly chosen fields in each group.
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3

Immunofluorescence Analysis of Spinal Cord

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The anesthetized rats (described above) were perfused with 200 mL of cold PBS. The ipsilateral L4-6 spinal cord tissue was rapidly excised, fixed in 4% PFA, embedded in paraffin, and sectioned. Paraffin sections were then sequentially dewaxed in xylene, anhydrous ethanol, 85% alcohol, and 75% alcohol, and placed in antigen retrieval buffer (100 × EDTA, pH 8.0). PBS (pH 7.4) was then used to wash the sections three times (5 min each), followed by 30 min of permeabilization with 0.3% Triton X-100 and a second wash with PBS, after which the sections were blocked for 1 h using 3% BSA. For co-staining, PPARG (1:100; Abcam), Iba-1 (1:500, Abcam, Cambridge, United Kingdom) and CD86 (1:100, Abcam) were co-incubated at 4 °C overnight, followed by 3 times of washing (5 min each) and 2 h of incubation in the dark at 20 °C in the presence of Alexa Fluor-488 or -594 goat anti-rabbit (1:500, Abcam), and counterstained with DAPI at 20 °C for 10 min in the dark. The analysis was performed using a 3DHISTECH slide scan system (CaseViewer; 3DHISTECH Ltd., Hungary).
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4

Evaluation of Cell Death Pathways

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Anti-p-Akt antibody (#0458), anti-cleaved caspase-3 (#9664), and anti-β-actin (#13E5) antibodies were purchased from Cell Signaling Technology, USA. PPARg (#ab70405) was purchased from Abcam, Inc. (Abcam, Cambridge,UK). Annexin V-FITC/PI Staining Kit was purchased from Roche, Switzerland. Atglistatin (#SML1075), methyl methacrylate monomer (#55909), necrostatin-1 (#N9037), Hoechst33342 (#861405) and 2`,7`-dichlorofluorescin diacetate (DCFH-DA;#D6883) were purchased from Sigma, USA. Superoxide dismutase (SOD; #A001-1) and malonaldehyde (MDA; #A002-1) detection kit were purchased from JIANCHENG Bioengineering Institute, China. Recombinant rat PEDF was synthesized by CUSABIO BIOTECH CO. Ltd, China. Cell Counting Kit (CCK-8) was from Dojindo Molecular Technologies (Kumamoto, Japan).
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5

Protein Expression Analysis in Adipocytes

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Cells were lysed in RIPA solution (Beyotime, China), and proteins isolated from cells were quantitated by bovine serum albumin method. Total 20 μg protein samples were separated by 12% sodium dodecyl sulfate-polyacrylamide gel and transferred to polyvinylidene difluoride membrane (Millipore, USA). The membrane was blocked at 4°C for 2 h with 5% goat serum, incubated with antibodies (1:1,000) against PPARg (Abcam, USA), FABP4 (Abcam, USA), ADIPOQ (Abcam, USA), GLUT4 (Abcam, USA), VEGF-B (Abcam, USA) and GAPDH (Simo Biotech, Shanghai, China) for 2 h at 25°C, followed by incubation with secondary antibody (Cell Signaling, Danvers, MA, USA) for 1 h at 25°C. The ECL Chemiluminescence reagents (Millipore, USA) were used to visualize the protein bands and the quantity-one software was used to quantify them.
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