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4 protocols using ep1793y

1

Western Blot Analysis of Cellular Proteins

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Cells were lysed with Laemmli sample buffer containing 2.5% β-mercaptoethanol and heated at 95°C for 5  min. Samples were loaded to 4–15% polyacrylamide gels (Bio-Rad) for electrophoresis. Proteins were then transferred to a Poly Vinylidene DiFluoride (PVDF) membrane (Merck), which was blocked with 5% dry milk, Tris buffered saline, 0.2% Tween, and incubated with primary antibodies (overnight at 4°C) followed by secondary antibodies (1:10000) for 1  hr at room temperature. Proteins were detected by using Luminata Crescendo (Merck) and LAS600 (GE Healthcare). The following antibodies were used: anti-MMP14 rabbit monoclonal (1:1000, EP1264Y, Abcam), anti-alpha-catenin rabbit monoclonal (1:1000, EP1793Y, Abcam), anti-Vimentin mouse monoclonal (1:1000, 1A4, Sigma), anti-Fibronectin rabbit polyclonal (1:1000, Sigma), anti-integrin β1 mouse monoclonal (1:1000, P5D2, Abcam), anti-integrin β3 rabbit monoclonal (1:1000, ERP17507, Abcam), and anti-actin mouse monoclonal antibody (1:2000, AC-40, Sigma).
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2

Immunohistochemical Analysis of Catenin Alpha-1

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Catenin alpha-1 protein expression was evaluated by immunohistochemistry (IHC) in section from a representative formalin-fixed and paraffin-embedded tumor tissue block. Briefly, a mouse monoclonal antibody against catenin alpha-1 (clone EP1793Y, Abcam, Cambridge, UK) was incubated at 1/200 for 20 min, and staining was performed with the Leica Bond-III instrument according to the manufacturer’s instructions. Immunostained slides were evaluated by a pathologist. Diffuse gastric tumors known to be negative for CTNNA1 and CDH1 germline variants were used as controls to assess the specificity of the staining.
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3

Immunofluorescence Analysis of Cadherin and Catenin Proteins

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Cells cultured on glass coverslips were rinsed several times in Ca2+- and Mg2+-containing PBS, fixed in 4% paraformaldehyde (PFA) for 10 min at 37°C, and permeabilized in 4% PFA containing 0.1% Triton X-100 for 1 min at room temperature. After blocking in 4% Block Ace solution (Yukijirushi Inc., Sapporo, Japan), the cells were incubated for 1 hr separately with primary antibodies: OB-cadherin (#4442; Cell Signaling Technology, Beverly, MA, USA) at 1:100 dilution; and EPLIN (16639-1-AP; Proteintech, Rosemont, IL, USA), β-catenin (H102 sc-7199; Santa Cruz, Dallas, TX, USA) and α-catenin (anti-α1 catenin antibody EP1793Y; Abcam, Cambridge, UK) all at a dilution of 1:50. After washing, bound antibodies were detected using Alexa Fluor 488-labeled anti-rabbit secondary antibody (Thermo Fisher Scientific) for 30 min. Then, F-actin (Phalloidin, Thermo Scientific) was stained in all slides. Cell nuclei were stained with DAPI (SlowFade Gold Antifade Mountant with DAPI; Thermo Fisher Scientific). As a negative control, normal rabbit IgG was used at the same concentration instead of the primary antibody in each experiment. Microphotos were taken using a fluorescence microscope (BZ-9000; Keyence, Osaka, Japan).
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4

Immunohistochemical Analysis of α-Catenin Expression

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Catenin alpha-1 protein expression was studied by immunohistochemistry (IHC) in formalin-fixed and paraffin-embedded material. Briefly, IHC staining was performed on one representative tumor block from each case. Sections of 4 µm were incubated with a mouse monoclonal antibody against α-E-catenin for 20 min (clone EP1793Y, Abcam, dilution 1/200). Staining was performed with a Leica immunohistochemistry automate. Catenin alpha 1 was detectable in normal epithelial structures (e.g., the glands of the stomach). Staining was scored according to the percentage of positive tumor cells.
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