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Micro ct scanner

Manufactured by Siemens
Sourced in Germany

The Micro-CT scanner is a compact, high-resolution imaging device designed for non-destructive analysis of small samples. It utilizes X-ray technology to capture detailed three-dimensional images of the internal structure and composition of a wide range of materials, including biological, geological, and industrial samples. The Micro-CT scanner provides high-quality data for researchers and technicians in various fields.

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8 protocols using micro ct scanner

1

Micro-CT Analysis of Tibia Bone

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Computed tomography (CT) imaging was performed using a micro-CT scanner (Siemens Medical Solutions, Knoxville, TN). The scanning parameters were an X-ray voltage of 60 kV with an anode current of 250 µA and an exposure time of 1000 ms. 360 rotation steps were performed resulting in a total rotation of 360°. The field of view was set to 31.12 mm × 42.10 mm and the binning factor was 1. Under med-high magnification the effective pixel size was 14.30 μm and the protocol was Hounsfield Unit (HU) calibrated. HU were standardized relative to distilled water and air with cylinder size adapted to the specimen size. For image reconstruction, a downsample factor of 2 was used. Analysis of the reconstructed images was performed using the vendor software package Inveon™ Research Workplace (IRW) software 2.2.
Measurements were performed in the right tibiae using predefined regions of interest (ROI), i.e., in the middle of the tibia (=diaphysis), 3/4 of the distance between the measurement point of the diaphysis and the proximal end of the bone (=metaphysis) and 3/4 of the distance between the measuring point of metaphysis and the proximal end of the bone (=epiphysis) as well as for the whole tibia. The thresholds for determining the volumes and density values were defined as follows: “whole bone” 675–5900 HU, “cortical bone” 1800–5900 HU, “cancellous bone” 675–1800 HU.
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2

Microstructural Analysis of Mouse Femurs

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Each mouse femur was fixed in 4% paraformaldehyde for 24 h and scanned by a microCT scanner (Siemens, Germany) with energy of 80 kV and 500 mA. Femurs were scanned over a total angle of 360° at incremental angles of 0.5°. The scanning time was 800 ms/frame at a resolution of 10.44 μm. The region of interest (ROI) represents the microstructure of the femur, which was 1500 μm above the proximal epiphyseal growth plate and was selected as a 2.5 × 2.5 × 3 mm3 cube. The parameters, including BMD, BV/TV, Tb.Th, Tb.N, BS/BV, Tb.Sp and TbPF were analyzed by COBRA software for microCT. These data were collected for blinded analyses.
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3

Micro-CT Analysis of Bone Structure

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The bone samples were fixed in 4% paraformaldehyde for 24 h prior to scanning using a micro-CT scanner (Siemens, Erlangen, Germany). The scanner was set at a voltage of 80 kV, a current of 500 μA, a resolution of 8.82 μm per pixel, and an exposure time of 1 500 ms. To determine the bone mass and microstructure, the trabecular bone in the L5 vertebra beginning from the cranial growth plate and extending to the caudal growth plate was analyzed. For the femur analysis, the region of interest started from 0.15 mm proximal to the distal epiphyseal growth plate and was extended by 0.5 mm. To analyze callus formation, 100 continuous slices (50 slices up and 50 slices down from the fracture line) covering the middle of the newly formed callus were selected as the region of interest (ROI). Micro-CT software was used to calculate the bone volume (BV) and bone volume fraction (BV/TV) of the callus, excluding the native cortical bone.
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4

Microstructural Analysis of Mouse Femurs

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Each mouse femur was fixed in 4% paraformaldehyde for 24 h and scanned by a microCT scanner (Siemens, Germany) with energy of 80 kV and 500 mA. Femurs were scanned over a total angle of 360° at incremental angles of 0.5 degrees. The scanning time was 800 ms/frame at a resolution of 10.44 μm. The region of interest (ROI) represents the microstructure of the femur, which was 1500 μm above the proximal epiphyseal growth plate and was selected as a 2.5 × 2.5 × 3 mm3 cube. The parameters, including BMD, BV/TV, Tb.Th, Tb.N, BS/BV, Tb.Sp, and TbPF were analyzed by COBRA software for microCT. These data were collected for blinded analyses.
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5

Fracture Healing and Bone Strengthening in Goats

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Three groups of goats underwent high-resolution scanning of all tibia samples, which were taken from each groups at 4, 8, 12, and 16 weeks after surgery using a micro-CT scanner from Siemens Medical Solutions (USA, Siemens Inc). The radiographic data were collected and reconstructed with the Inveon Acquisition Workplace (USA, Siemens Inc.), and the Inveon Research Workplace (USA, Siemens Inc.) was used to analyse the data. The scanning protocol used was 80 kV and 500 μA, and the effective pixel size was 28.21 μm. Three-dimensional reconstruction of the volume of interest (VOI) in these regions was carried out, and the radiographic images and CT grey values were analysed to evaluate fracture healing and bone strengthening. General analysis was used to obtain coronal-plane, sagittal-plane and horizontal-plane images. Multimodal 3D visualization was used to obtain a stereoscopic image of the fracture and bone plate region.
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6

Exosome-loaded Porous Microspheres Enhance Bone Regeneration

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Animal experiments were sanctioned by the Peking University Animal Care and Use Committee (LA2020483) and operations were in accordance with the institutional animal guidelines. 5 mm-calvarial defects were operated on 6-week-old male SD rats which were accommodated in a specific pathogen-free (SPF) environment. The total 32 rats were randomly separated into five groups: 1) control group with normal saline treatment (control, n = 8); 2) PDA coating porous PLGA microsphere (PMS-PDA, n = 8); 3) and normal exosomes loaded PMS-PDA treatment (PMS-PDA + Exo, n = 8); 4) hypoxia exosomes loaded PMS-PDA treatment (PMS-PDA + H-Exo, n = 8). At predetermined timepoints (4 and 8 weeks), rats were sacrificed by CO2 inhalation. The calvaria were harvested and fixed with 4% paraformaldehyde for 72 h. Micro-CT scanner (Siemens, Germany) was used to assess the new bone formation by indicators such as bone mineral density (BMD) and the ratio of new bone volume to tissue volume (BV/TV). Hematoxylin & eosin (HE) and Masson staining were performed to evaluate the new bone formation, and the sections were observed from coronal plane. Immunofluorescence analysis of osteogenesis-associated protein OCN and immunohistochemical staining of PCNA, CD31 and COL-I were evaluated to further reveal the new bone formation. The detailed procedures for animal experiments are provided in Supplementary Information.
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7

Microstructural Analysis of Mouse Femur

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After fixation in 4% paraformaldehyde for 24 h, each mouse femur was scanned using a microCT scanner (Siemens, Germany) at energies of 80 kV and 500 mA. Femurs were scanned over a total angle of 360° at incremental angles of 0.5°. The scanning time was 800 ms/frame with a resolution of 10.44 μm. A region of interest (ROI) was chosen to represent the microstructure of the femur. The ROI was 15 μm above the proximal epiphyseal growth plate and selected as a 2.5 × 2.5 × 3 mm3 cube. The parameters, including BMD, BV/TV, Tb.Th, Tb.N, Tb.Sp and TbPF, were analyzed using COBRA software for microCT. These data were collected for blinded analyses.
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8

Quantifying Aortic Calcification via Micro-CT

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The extent of aortic calcification was evaluated using Micro-CT as previously described.7 (link),8 (link),25 (link) Initially, rats were euthanized by an intraperitoneal injection of sodium pentobarbital (150 mg/kg), and their aortas were harvested and promptly fixed with 4% formaldehyde. These aortic samples were scanned with a Micro-CT scanner, from Siemens Inveon, at a resolution of 0.079 mm. Following scanning, Micro-CT images were analyzed using the Siemens Inveon research workplace software.
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