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146 protocols using m csf

1

Isolation and Differentiation of Murine Macrophages

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Peritoneal macrophages were isolated by flushing the peritoneal cavity of 10-week-old mice with cold PBS buffer (Dulbecco's PBS without Mg+ & Ca2+; PAA) and allowed them to become adherent overnight in RPMI medium (RPMI 1640; PAA) supplemented with 10% FCS. Subsequently cells were differentiated in M1 or M2 phenotype by a 4 hours treatment with 1 μg/ml LPS (Sigma-Aldrich) or 10 ng/ml M-CSF (Sigma-Aldrich) respectively [54 (link)].
Bone marrow was isolated by rinsing the shaft of femur and tibia of the same mice with PBS buffer (Dulbecco's PBS without Mg+ & Ca2+, PAA) and a 27G needle. Hematopoietic stem cell were cultured in DMEM medium (DMEM High glucose; PAA) supplemented with 10% FCS and differentiated in Macrophages with a five days treatment of 50 ng/ml M-CSF (Sigma-Aldrich). Afterwards cells were differentiated in M1 or M2 phenotype by a 48 hours treatment with 1 μg/ml LPS (Sigma-Aldrich) or 10 ng/ml M-CSF (Sigma-Aldrich) respectively [54 (link)].
Same was performed with the macrophage cell line J774A.1 following the previously described protocol. M1 and M2 macrophage phenotype was confirmed by RT-PCR expression analysis of M1 (iNOS and IL-6) and M2 (Arginase and CCR2) specific genes using the previously described protocol and the primers listed in Supplementary Table S6 [55 (link)].
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2

Osteoclast Differentiation of Bone Marrow Macrophages

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All animal procedures were approved by the Chosun University Institutional Animal Care and Use Committee (approved number: CICUC2021-S0034). BMMs were isolated from the femurs and tibias of 6-week-old C57BL/6 male mice, as previously described [45 (link)]. Briefly, isolated cells were cultured in α-MEM (Welgene Inc., Gyeongsan, Republic of Korea) supplemented with 10% fetal bovine serum (FBS; Welgene Inc., Gyeongsan, Republic of Korea), 1% penicillin-streptomycin (Welgene Inc., Gyeongsan, Republic of Korea), and 10 ng/mL M-CSF (Sigma-Aldrich, St. Louis, MO, USA) for 16 h. Thereafter, collected nonadherent cells were cultured in 30 ng/mL M-CSF for 48 h. Finally, adherent cells were used as BMM in the present study. To osteoclast differentiation, BMMs were cultured at a density 1 × 104 cells/mL for 72 h in the presence of 30 ng/mL M-CSF and 50 ng/mL RANKL (Sigma-Aldrich, St. Louis, MO, USA) with or without 10, 25, and 50 μg/mL OFLEE.
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3

Isolation and Differentiation of Osteoclasts

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Bone marrow cells and hematopoietic cells were extracted from the tibias and femurs of three-week-old BALB/c female mice under general anesthesia, as described previously (19 (link)). Cells were cultured in α-minimum essential medium (α-MEM) with 15% fetal bovine serum (FBS) (both from Gibco; Thermo Fisher Scientific, Inc., Waltham, MA, USA) and 1% penicillin-streptomycin (PS) at 37°C and 5% CO2 for 3 h to remove adherent cells. Non-adherent cells were seeded onto new plates and cultured in α-MEM with M-CSF (20 ng/ml; Sigma-Aldrich; Merck KGaA, Darmstadt, Germany) for 3 days, which resulted in the growth of bone marrow-derived macrophages (BMMs).
For osteoclast differentiation and TRAP activity staining, BMMs were seeded in 6-well plates and cultured in the presence of M-CSF (20 ng/ml) and RANKL (20 ng/ml; Sigma-Aldrich; Merck KGaA) with or without 1% PRP for 3 days.
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4

Retroviral Transduction of Bone Marrow Macrophages

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Retrovirus packaging and BMM infection by using retroviral vectors pMX-IRES-green fluorescent protein (GFP) and pMX-constitutively active (CA)-NFATc1-IRES-GFP were performed as described previously [24 (link)]. In brief, retrovirus packaging was performed by transient transfection of these pMX vectors into Plat-E retroviral packaging cells (Cell Biolabs, San Diego, CA, USA). BMMs were incubated with the viral supernatant from Plat-E cells together with polybrene (6 μg/mL, Sigma-Aldrich) and M-CSF (60 ng/mL) for 12 h. After removing viral supernatant, BMMs were cultured in the presence of M-CSF for 1 day and then treated as indicated.
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5

Osteoclastogenesis from Mouse Bone Marrow

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Bone marrow was flushed from the long bones of 6–8 week old C57BL/6 WT or DGKζ−/− mice and cultured in α-minimum Eagle’s medium (α-MEM; Sigma-Aldrich, St. Louis, MO) containing 5% heat-inactivated fetal bovine serum, glutamine and 1/50 volume CMG 14–12 culture supernatant as source of M-CSF (17 ) for 3 days to generate BMMs. For osteoclastogenesis, BMMs were further cultured in the presence of 100 ng/ml GST-RANKL (purified from BL21 with pGEX-6-RANKL plasmid, using HOOK GST protein purification kit, G-BIOSCIENCES, St. Louis, MO) and 25 ng/ml M-CSF (Sigma-Aldrich, St. Louis, MO) for an additional 3–5 days. For TRAP staining, cells were fixed in 4% paraformaldehyde and stained using the leukocyte acid phosphatase kit (Sigma-Aldrich). For bone resorption, BMMs were cultured on tissue culture plates in the presence of osteoclastogenic medium for 2 days, lifted, and replated in equal number on bone slices for additional 2 days. Cells were scraped and bones stained with 20 μg/ml peroxidase-conjugated wheat-germ agglutinin (Sigma-Aldrich) for 1h at room temperature, followed by incubation with 3,3′-diaminobenzidine (Sigma-Aldrich) for 30 min. Bone resorptive pits were analyzed using a light microscope (Nikon) and quantified using Image J software.
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6

Infection Assay of Bone Marrow-Derived Macrophages

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Primary wild-type BMDMs from C57BL/6JRj mice (Janvier) were differentiated in DMEM (Sigma) with 20% M-CSF (supernatants of L929 mouse fibroblasts), 10% v/v FCS, 10 mM HEPES, nonessential amino acids and penicillin (100 IU ml−1)/streptomycin (100 μg ml−1) (all BioConcept). One day before infection, BMDMs were seeded into 24- or 96-well plates (Eppendorf) at a density of 1.5 × 105 or 5 × 104 cells per well in DMEM (Sigma) with 10% M-CSF (supernatants of L929 mouse fibroblasts), 10% v/v FCS, 10 mM HEPES and nonessential amino acids (all BioConcept). Where required, BMDMs were pre-stimulated overnight with LPS (from Escherichia coli strain O111:B4 (InvivoGen; tlr-3pelps)). F. novicida were grown overnight at 37 °C with aeration as described above. The bacteria were added to the BMDMs at a multiplicity of infection of 100 or the indicated value. The plates were centrifuged for 5 min at 500g to ensure similar adhesion of the bacteria to the cells and were incubated for 120 min at 37 °C. Next, the medium was replaced with fresh medium containing 10 μg ml−1 gentamicin (BioConcept) to kill extracellular bacteria, then plates were incubated at 37 °C for the indicated length of time.
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7

Murine Bone Marrow-Derived Macrophage Generation and Cytokine Stimulation

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For murine BMDMs, bone marrow was flushed from the femur and tibia of mice using ice-cold sterile PBS and the subsequent cell suspension treated with red cell lysis buffer. Treated cells were then washed in ice-cold sterile PBS. BMDMs were generated by incubation of bone marrow cells in RPMI-1640 medium containing 10% FCS and 1X penicillin-streptomycin (both Sigma-Aldrich) (referred to as complete RPMI (cRPMI)) supplemented with 100 ng/ml murine macrophage colony-stimulating factor (M-CSF; Peprotech). M-CSF-supplemented culture medium was replaced on day 3 and adherent BMDMs were harvested on day 5-6.
For cytokine stimulation experiments, plated BMDMs were stimulated with 20 ng/ml murine GM-CSF (Peprotech) or control media (cRPMI supplemented with 20 ng/ml M-CSF) for 16 h. For macrophage-ILC3 co-cultures, 2.5-5 × 104 BMDMs were plates in flat-bottomed 96-well plates (Sigma-Aldrich) in cRPMI supplemented with 20 ng/ml M-CSF overnight before co-culture with flow-sorted intestinal ILC3s (2:1 ratio of macrophages:ILC3s) or ILC3-conditoned media. After 24-72 h, cells were harvested or used for downstream assays. ILC3-conditioned media was generated by culture of ILC3s in cRPMI supplemented with 50 ng/ml murine IL-1β (Peprotech) for 16 h at a concentration of 1 × 106 ILC3s/ml cRPMI. cRPMI supplemented with IL-1β was used as a control in these experiments.
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8

RNAi Vector Construction and Retroviral Transduction

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RNAi expression vectors were constructed with piGENEmU6 vector (iGENE Therapeutics; Tokyo, Japan) as described [32 (link)] [33 (link)], and the U6 promoter and inserts were cloned into pMx vectors. Retroviruses carrying specific genes were prepared by transfecting BOSC packaging cells with retrovirus vectors and collecting the supernatant after 2 days. For retroviral infection, after the first 2 days of culture, BMMs were incubated with retrovirus in the presence of 30 ng/ml M-CSF and 4 ng/ml polybrene (Sigma-Aldrich; St Louis, MO, USA) for 6 h and cultured overnight in the presence of 10 ng/ml M-CSF. To select the transduced BMMs, cells were detached with Trypsin/EDTA (Sigma-Aldrich; St Louis, MO, USA) and cultured with 10 ng/ml M-CSF and 2 μg/ml puromycin (Sigma-Aldrich) for 2 days. Primer sequences were as follows: shNedd9_1 (sense) 5′-gtttGCATTAGATCTTTGGTCGACAgtgtgctgtccTGTTGGCCAAAGGTCTGATGCttttt-3′, shNedd9_1 (antisense) 5′-atgcaaaaaGCATCAGACCTTTGGCCAACAggacagcacacTGTCGACCAAAGATCTAATGC-3′, shNedd9_2(sense) 5′-gtttGCAGTGCTAGGAGTGACATGTgtgtgctgtccACATGTTACTCCTGGTACTGCttttt-3′, shNedd9_2 (antisense) 5′-atgcaaaaaGCAGTACCAGGAGTAACATGTggacagcacacACATGTCACTCCTAGCACTGC-3′.
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9

Rat Bone Marrow Cell Differentiation

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Bone marrow (BM) cells collected from SD rat femur were cultured in α‐Minimum Essential Medium (α‐MEM) for 3 hours to initiate adherence; then, the non‐adherent cells in the medium were collected and re‐seeded at a density of 1 × 106 cells/mL. The cells were cultured in complete medium with macrophage colony‐stimulating factor (M‐CSF) (20 ng/mL; Sigma Aldrich) for 3 days; then, the medium was refreshed every 3 days with complete medium supplemented with M‐CSF (20 ng/mL) and receptor activator of nuclear factor kappa‐Β ligand (RANKL) (20 ng/mL; Sigma Aldrich).
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10

BMDM Polarization and Gene Expression

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BMCs isolated as described above were seeded at 5 × 106 per 6‐cm dish in RPMI‐1640 (Sigma) with 20% heat‐inactivated FBS (Omega Scientific), penicillin (100 U/ml; Gibco), streptomycin (100 μg/ml; Gibco) and 10 ng/ml M‐CSF (R&D) at 37°C with 5% CO2 for 6 days. BMDMs were then stimulated for 6‐h with activation media consisting of DMEM with 0.25% heat‐inactivated FBS, penicillin, streptomycin and 10 ng/ml M‐CSF with or without IL‐4 (25 ng/ml; Sigma) and IL‐10 (10 ng/ml; Sigma). RNA was collected in Trizol for QPCR analysis as described above. PPIA and TPT1 were used as reference genes for QPCR experiments using BMDMs.
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