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Biotinylated donkey anti rabbit

Manufactured by Jackson ImmunoResearch
Sourced in United States, Panama

Biotinylated donkey anti-rabbit is a secondary antibody that binds to rabbit primary antibodies. It is labeled with biotin, which can be used for various detection and labeling applications.

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14 protocols using biotinylated donkey anti rabbit

1

Multicolor Immunofluorescence Staining of Arterial Tissue

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Arterial tissue sections (S3 Fig.) were incubated overnight at 4°C with rat anti-mouse CD18 (1:50, clone C71/16, Cedarlane), Cy3-conjugated mouse-anti human α-actin (1:15000, clone 1A4, Sigma-Aldrich), goat anti-mouse/human ApoB (1:100, R&D systems), and rabbit anti-Ki67 (1:100, clone SP6, GeneTex). The sections were washed and incubated with F(ab)2 AF594-conjugated monovalent donkey anti-goat (1:200, Jackson ImmunoResearch,) and biotinylated donkey anti-rabbit (1:200, Jackson ImmunoResearch) at room temperature for 45 min, followed by Atto425-conjugated streptavidin (1:200, ATTO-TEC) and AF488-conjugated goat anti-mouse CD31 (1:150, R&D systems) at room temperature for 45 min. Nuclei were stained with DAPI (2 μg/ml for 4 min) and the slides were mounted with ProlongGold mounting media (Life Technologies).
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2

Immunofluorescent Labeling of GRP and Galanin

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Two slides with sections for each animal were treated with 1% H202 (Fisher, Cat# H323-500) for 10 min and antibody incubation solution [saline-buffered sodium phosphate buffer (PBS)] containing 0.1% bovine serum albumin (Fischer, Cat# BP1605-100) and 0.4% Triton X-100 (Fisher, BP151-100). Next, sections were incubated with a polyclonal rabbit antibody specifically recognizing GRP (Phoenix, RRID: AB_2722600, Cat: H-027-12, Burlingame, CA; 1:20,000 in incubation solution; 17 h), biotinylated Donkey anti-rabbit (Jackson, Cat: 711065152, West Grove, PA; 1:500 in incubation solution; 1 h), ABC-elite (Vector, Ref: PK-6100, Burlington, CA; 1:1,000 in PBS; 1 h), tyramine sample amplification (Perkin Elmer, Ref: SAT700B001EA; Walthalm, MA; 1:250 in PBS + 1 μl/ml of 3% H202; 10 min), and with Dylight 488-conjugated streptavidin (Invitrogen; Cat: SA5-10086; Rockford, IL; 1:200; 30 min). Subsequently, sections were incubated with a polyclonal rabbit antibody specifically recognizing galanin (Peninsula, RRID: AB_518348, Cat: T4334, San Carlos, CA; 1:3,000; 17 hours) and Dylight 550-conjugated donkey anti-rabbit (Invitrogen; Cat: SA5-10039; Rockford, IL; 1:100, 30 min).
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3

Immunohistochemical Detection of Phospho-Histone H3

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Paraffin-embedded sections were rehydrated, and antigen retrieval was performed by heating in citrate buffer (pH 6.0) for 20 min at 96 °C. After blocking with normal donkey serum, sections were incubated overnight with Phospho-Histone H3 primary antibody (Cell Signaling, Danvers, MA) at 1:100. The next day, following several washes in PBS, a biotinylated donkey anti-rabbit (Jackson Immunoresearch, Suffolk, UK) at 1:500 was added for 60 min, followed by the ABC complex (Vector, Burlingame, CA) and developed with diaminobenzidine (Dako, Carpinteria, CA). Slides were counterstained with hematoxylin. Pictures were taken from each section with the 10x objective.
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4

Quantifying Eotaxin Levels in BALF and Plasma

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Eotaxin-1 and eotaxin-2 levels in BALF and plasma were quantified by using Quantikine ELISA Kits (R&D Systems Inc, Minneapolis, MN). Expression of eotaxins by proangiogenic hematopoietic progenitor cells was quantified using immunofluorescence as described in details elsewhere (30 (link)). Rabbit anti-mouse eotaxin-1 (1/50, Santa Cruz) and goat anti-mouse eotaxin-2 (1/50, Santa Cruz) polyclonal antibodies were used. Biotinylated donkey anti-rabbit (1/1,000 Jackson ImmunoResearch Laboratories, West Grove, PA) and streptavidin Alexa Fluor 568 (1/500, Life Technologies. Carlsbad, CA) were used as secondary and tertiary reagents, respectively, for eotaxin-1 detection. Donkey anti-goat Alexa Fluor 488 (1/500, Life Technologies) was used as secondary antibody for eotaxin-2. Values from different experiments were normalized against OVA/OVA group.
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5

Immunohistochemical Staining Protocols for 5-mC and 5-hmC

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For each immunohistochemical procedure, a series of sections was stained using standard immunohistochemical protocols as previously described [30 (link),31 (link),38 (link)]. Mouse monoclonal anti-5-mC (dilution 1:500, Genway Biotech, San Diego, CA, USA) was used as a primary antibody for 5-mC, and a biotinylated donkey anti-mouse (dilution 1:200; Jackson Westgrove, PA, USA) as the secondary antibody. For the detection of 5-hmC, a rabbit polyclonal anti-5-hmC antiserum (dilution 1:25,000; Active Motif, Rixensart, Belgium) was used as a primary antibody and a biotinylated donkey anti-rabbit (dilution 1:200; Jackson Westgrove, PA, USA) as the secondary antibody. For each primary antibody, the sections were processed as a single batch to avoid differences in staining intensities between batches. The specificity of the commercially available primary antibodies has been confirmed in our previous work [25 (link),39 (link)]
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6

Immunohistochemical detection of Fos expression

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Sections were placed in 0.01M phosphate buffered saline (PBS) solution with 2% sodium azide added and 0.3% hydrogen peroxide for 15 min. After three 5-min washes with PBS, sections were transferred to PBS with 0.3% Triton added (PBST) containing 2% normal donkey serum (NDS) for 2 h. Sections were incubated overnight (16h) in the same solution with the addition of primary antibody (Fos antibody at 1:10,000 Calbichem, Santa Cruz, CA). Sections were rinsed three times (3x) in PBST and transferred to secondary antibody (biotinylated donkey anti-rabbit, 1:500, Jackson ImmunoResearch Laboratories, West Grove, PA) for 2 h. Next, sections were rinsed 3x in PBST and transferred to solution containing avidin-biotin complex (1:500, Vector Laboratories, Burlington, CA) for 1.5 h. Sections were rinsed twice with PBST and once with 0.05 M Tris buffer for 5 min. To visualize Fos-related antigen-positive cells, sections were placed in 3′, 3′-diaminobenzidine (DAB) with 0.0002% H2O2 and 0.6% nickel ammonium sulphate in 0.05 M Tris buffer for 4.5 min. The DAB reaction was stopped by immediately transferring sections into Tris buffer. Next, sections were rinsed 3x in PBS for 5 min and transferred to PBS-Az for 45 min.
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7

Antibody Staining and Drug Testing Protocol

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The antibodies used in the present study are provided in Table 1. Secondary antibodies including biotinylated donkey anti-rabbit (Jackson Immunoresearch, West Grove, PA, USA) (catalog number: 711-065-152), and Alexa fluor 488-conjugated goat anti-rabbit (Life Technologies, Grand Island, NY, USA) (Ref# A11034), horseradish peroxidase-conjugated goat anti-rabbit and anti-mouse (Santa Cruz Biotechnology, TX, USA), (sc-2005 and sc-2004)) were used. The test drug; BSB (catalog number: 14462), ROT (catalog number: R8875), glutathione (GSH) assay kit (catalog number: CS0260) and other analytical grade reagents used in this study were obtained from Sigma Aldrich, St. Louis, MO, USA.
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8

Immunohistochemistry for Fluorescent Markers

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IHC. Tissue was processed for GFP, mCherry, dsRed and/or c-Fos (FOS-IR) IHC as previously described (D’Agostino et al., 2016 ). Briefly, mice were transcardially perfused with phosphate buffered saline (PBS) followed by 10% neutral buffered formalin (Sigma-Aldrich). Brains were extracted, post-fixed in 10% neutral buffered formalin at 4°C, cryoprotected in 20% sucrose at 4°C and then sectioned coronally on a freezing sliding microtome at 25 μm. Tissue was processed for chicken anti-GFP (1:1000; AbCam, ab13970), rabbit anti-dsRED (1:1000; Rockland, 600-401-379), goat anti-mCherry/RFP (1:1000; Sicgen, AB0040-200) or anti-c-FOS (1:5000, rabbit, Calbiochem, PC38) primary antibodies and a biotinylated donkey anti-rabbit (1:500, Jackson ImmunoResearch Laboratories, Inc.) or Alexa Fluor (1:500, Life Technologies) secondary antibodies using standard protocols previously described (Lam et al., 2009 (link), Heisler et al., 2006 (link)). Tissue was then mounted on slides, cover slipped and the NTS visualized using an Axioskop II microscope (Carl Zeiss, Oberkochen, Germany) and Adobe Photoshop CS5 software. Images of single-label immuoreactivity (IR) for GFP or mCherry were used to visualize and analyze NTS injection sites.
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9

Immunohistochemical Analysis of Brain Tissue

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Tissue preparation and immunohistochemistry were done as described (Palop et al., 2011 (link)). After fixation, brains were cryoprotected in 30% sucrose in phosphate-buffered saline (PBS) for 2 days and sectioned with a sliding microtome (Leica Microsystems) into 30-µm sections. Ten stereological subseries sections from each hemibrain were stored in a solution containing 30% glycerol, 30% ethylene glycol, and 40% PBS at −20°C until staining. Primary antibodies used included rabbit anti-GFP (1:3,000; Life Technologies), chicken anti-GFP (1:500; Aves Labs), rabbit anti-Nav1.1 (1:500; Alomone), mouse anti-parvalbumin (1:3,000; Swant), rabbit anti-parvalbumin (1:3,000; Swant), rat anti-somatostatin (1:50; Novus), rabbit anti-neuropeptide Y (1:2000; Immunostar), rabbit anti-Iba-1 (1:1000; Wako), rabbit anti-GFAP (1:3000; Sigma), and biotinylated 82E1 (1:1000; Immuno-Biological Laboratories). Primary antibodies were detected with biotinylated donkey anti-rabbit (1:500; Jackson ImmunoResearch), Alexa Fluor 488 donkey anti-rabbit (1:300; Life Technologies), Alexa Fluor 488 donkey anti-chicken (1:300; Life Technologies), Alexa Fluor 594 donkey anti-rat (1:300; Life Technologies), Alexa Fluor 594 donkey anti-mouse (1:300; Life Technologies), or Alexa Fluor 594 donkey anti-rabbit (1:300; Life Technologies).
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10

Antibodies for Tau Protein Analysis

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Phosphorylated tau rabbit polyclonal antibody (Ser396; sc‐101815, Ser262 sc‐101813), p‐GSK‐3β goat polyclonal antibody (Ser9; sc‐11757), p‐PP2A‐Cα/β mouse monoclonal antibody (F‐8; sc‐271903), tau mouse monoclonal antibody (A‐10; sc‐390476), GSK‐3β rabbit polyclonal antibody (H‐76; sc‐9166) and PP2A‐Aα goat polyclonal antibody (C‐20; sc‐6112) were purchased from Santa Cruz. Mouse monoclonal GFAP and Phospho‐PHF‐tau pSer202/Thr205 Antibody (AT8) were obtained from Associate Professor John Power from the Alzheimer's and Parkinson's laboratory of Flinders University. The p‐AMPK rabbit polyclonal antibody (Thr172, #2531) and AMPK rabbit polyclonal antibody (#2532) were purchased from Cell Signalling Australia. Catalase sheep affinity purified antibody was purchased from the Proteomics Facility of Flinders University. Mouse NeuN antibody (MAB377) was purchased from Merck Millipore Australia. Secondary antibodies were purchase from Jackson Immuno Research, USA (HRP donkey anti‐mouse, anti‐rabbit, anti‐goat, Biotinylated donkey anti‐rabbit, Alexa Fluor® 488 Donkey anti‐rabbit, Alexa Fluor® CY3 Donkey anti‐mouse and Alexa Fluor® CY3 Donkey anti‐Sheep).
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