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Sc 2055

Manufactured by Santa Cruz Biotechnology
Sourced in United States

Sc-2055 is a laboratory instrument designed for cellular analysis. It is capable of performing high-sensitivity detection and quantification of cellular components and biomolecules. The core function of Sc-2055 is to provide accurate and reliable data for researchers in the field of biotechnology and life sciences.

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7 protocols using sc 2055

1

Immunodetection with Goat Anti-IgG HRP

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HRP goat anti-mouse IgG (RRID: AB_631736; 1:8000; sc-2055; Santa Cruz, Heidelberg, Germany).
HRP goat anti-rabbit IgG (RRID: AB_631748; 1:8000; sc-2054; Santa Cruz, Heidelberg, Germany).
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2

Protein Expression Analysis by Immunoblotting

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Cells were lysed and then transferred to polyvinylidene difluoride membranes (Millipore). The membranes were blocked and incubated with primary antibodies (Table S1) at 4 °C overnight, followed by incubation with a secondary antibody (1:2000, Cat.#sc-2055, Cat.#sc-2004, Santa Cruz, CA, USA). The membranes were developed using an enhanced chemiluminescence (ECL) detection kit (Amersham Pharmacia Biotech, Piscataway, NJ, USA). Equal sample loading was confirmed by probing the membranes with GAPDH. The intensity of the protein bands was determined via densitometry using ImageJ system.
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3

Protein Fractionation and Western Blot Analysis

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The whole cell lysates were prepared by using RIPA Lysis and Extraction Buffer (Thermo Scientific, IL, USA) with Pierce Protease and Phosphatase Inhibitor Mini (Thermo Scientific, IL, USA). The fractionated lysates were prepared by using the Subcellular Protein Fractionation Kit for Cultured Cells (Thermo Scientific, IL, USA). Protein concentrations were measured using the Bio-Rad Protein Assay (Bio-Rad; CA, USA), and the concentration in individual samples was equalized before adding 4x Laemmli buffer to a final concentration of 1x. Equal amounts of protein (50 μg whole cell lysates, 45 μg fractionated lysates) were run on 10% SDS-PAGE gels and then transferred with iBlot 2 Transfer Stacks and iBlot 2 Dry Blotting System onto PVDF membranes (Invitrogen, Thermo Scientific, IL, USA). After one hour 5% milk block, membranes were probed with the antibodies diluted with 5% BSA (NRF3) or 5% milk (β-actin and PCNA and secondary antibodies) in Tris-buffered saline with 0.1% Tween 20. Primary antibodies anti-NRF3 (HPA055889, Sigma-Aldrich), anti-β-actin (NB600-501, Novus Biologicals, UK), and anti-PCNA (NB600-501SS, Novus Biologicals, UK) were incubated overnight, and appropriate HRP-conjugated secondary antibodies (sc-2054 and sc-2055, Santa Cruz, CA, USA) were incubated at RT for one hour. Blots were detected with the Western blot imaging system Azure 600 (Azure Biosystems, CA, USA).
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4

Quantifying Cardiac Metabolic Enzymes

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Frozen left ventricular (LV) tissue samples (30 mg) were homogenized, resolved by SDS-PAGE, and transferred onto nitrocellulose. The membranes were blocked in 5% fat-free milk for 1 h before being probed with primary antibodies that included: anti–acetyl-lysine (Millipore, AB3879, MilliporeSigma, St. Louis, Missouri), anti–β-hydroxyacyl-CoA-dehydrogenase (βHAD) (ab37673, Abcam, Cambridge, United Kingdom), anti–long-chain-acyl-CoA-dehydrogenase (LCAD) (ab129711, Abcam), anti–pyruvate-dehydrogenase (PDH) (2784, Cell Signaling Technology, Danvers, Massachusetts), and anti–phospho-PDH (PDH ε1a [Ser293]) (Calbiochem, AP1062, MilliporeSigma). The membranes were then incubated with the appropriate secondary antibodies (goat anti-rabbit, catalog sc-2054; goat anti-mouse, catalog sc-2055; and goat anti-chicken, catalog sc-2901; Santa Cruz Biotechnology, Dallas, Texas). Protein bands were visualized with enhanced chemiluminescence and semiquantified via densitometric analysis using the Image J 1.50i software (NIH, Bethesda, Maryland). Tubulin (catalog T6074; MilliporeSigma) acted as the loading control to normalize any variation in protein loading.
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5

Quantification of FTO and ALKBH5 Proteins

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NB4 and MONOMAC6 cells were harvested after FB23-2 treatment for 72 hr and lysed with the RIPA Lysis buffer solution at 4 °C. Supernatants were centrifuged and the protein concentration was quantified with BCA Protein Assay (23225, ThermoFisher). An equal amount of whole-cell lysate from each sample was loaded to the SDS-PAGE. The proteins were transferred onto nitrocellulose membrane (Millipore, USA) and blocked with 5% skim milk and incubated with antibodies against FTO, ALKBH5, RARA, ASB2, GAPDH etc. HRP conjugated Goat Anti-mouse (sc-2055, Santa Cruz Biotechnology) or Anti-rabbit IgG (sc-2030, Santa Cruz Biotechnology) was used as secondary antibody.
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6

Quantitation of Renilla Luciferase Protein Expression

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HEK293T cells were seeded in 6-well plates (5 × 105 cells/well) and the next day were transfected with 5 μg of Renilla luciferase (RLuc)-expression constructs, using the calcium phosphate method as described in [35 (link)]. At 48 h post transfection, cells were washed with ice-cold PBS and lysed in 250 μL of cracking buffer (0.09 M Tris·Cl, pH 6.8. 20% glycerol, 2% SDS, 0.02% bromophenol blue, 0.1 M DTT). Ten microliters of each sample was analyzed by SDS page/Western blotting as described previously [26 (link)], using the α-RLuc mouse monoclonal antibody (Ab; MAB4400, Merck Millipore, Burlington, MA, USA; 1:4000) and the goat α-mouse immunoglobulin Ab conjugated to horseradish peroxidase (sc-2055, Santa Cruz Biotech, Dallas, TX, USA; 1:10,000), both diluted in PBS/BSA 3% (w/v). Immunoblots were developed with the ECL prime substrate (Amersham, Little Chalfont, UK) in combination with Carestream® Kodak® BioMax® light autoradiography films (Merck Millipore).
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7

Western Blot Analysis of p53 Expression

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ME180, MS751, and SCC152 cells seeded at 2 × 105 per well in 6-well plates were treated with test compounds for 48 h. Western blotting was performed as previously described [15 (link)] and cell lysates were analyzed with anti-p53 (DO-1, 1:4000; Santa Cruz Biotechnology, Dallas, TX, USA) and anti-β-actin (A5441, 1:8000; Sigma-Aldrich, St. Louis, MO, USA) mouse primary antibodies. Immunocomplexes were detected with goat anti-mouse antibodies conjugated to horseradish peroxidase (sc-2055, 1:2000; Santa Cruz Biotechnology, Dallas, TX, USA). Uncropped Western blots can be found in the Supplementary Materials.
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