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Synapt g2 s hdms instrument

Manufactured by Waters Corporation
Sourced in United Kingdom

The Synapt G2-S HDMS instrument is a high-resolution mass spectrometer designed for advanced analytical applications. It utilizes ion mobility separation technology to provide additional structural information about analytes, complementing the high-resolution mass data. The core function of the Synapt G2-S HDMS is to perform accurate mass measurements and ion mobility separations to enhance the analysis of complex samples.

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4 protocols using synapt g2 s hdms instrument

1

Structural Analysis of Biomolecules via TWIMS-MS

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TWIMS-MS experiments were carried out on a Waters Synapt G2-S HDMS instrument (Milford, MA, USA). All samples were introduced via nano-electrospray ionization (nESI) using a custom-built ion source interface operated in positive ion mode. The interface was designed to accommodate nESI emitters made from Pyrex melting point capillaries (Corning, NY, USA) using a vertical micropipette puller. The capillary voltage was maintained between 0.9 – 1.5 kV. Sample cone voltage and source temperature were maintained at 10 V and 80°C, respectively. TWIMS parameters were held constant for all experiments: 60 mL/min nitrogen gas flow, 40 V wave height, and 600 m/s wave velocity. The mass spectra and TWIMS arrival time distributions (ATDs) were extracted and analyzed using DriftScope 2.7 and MassLynx 4.1 (Waters), with further analysis and graphing being performed in Igor Pro 7.0 (WaveMetrics; Lake Oswego, OR, USA) and SigmaPlot 13.0 (Systat; Chicago, IL, USA).
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2

Drift Tube Ion Mobility-Mass Spectrometry

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Drift tube (DT) IM-MS measurements were performed on a modified Synapt G2-S HDMS instrument (Waters Corporation, Manchester, UK), described in detail elsewhere [15 (link)]. Direct infusion measurements were performed in positive ion mode using platinum/palladium (Pt/Pd, 80/20)-coated borosilicate capillaries prepared in-house. For nanoelectrospray ionization (nESI), typically 5 μL of sample was loaded to a capillary and electrosprayed by applying a capillary voltage of 0.6–1.1 kV.
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3

Native Glycan Characterization by IM-MS

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Traveling wave (TW) IM-MS
measurements were performed on a Synapt G2-S HDMS instrument (Waters
Corporation, Manchester, UK), described in detail elsewhere.25 (link) Direct infusion measurements with released native
glycans were performed in positive ion mode using platinum/palladium
(Pt/Pd, 80/20) coated borosilicate capillaries prepared in-house.
For nanoelectrospray ionization (nESI), typically 5 μL of the
sample was loaded to a capillary and electrosprayed by applying a
capillary voltage of 0.6–1.1 kV.
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4

Linear Drift Tube IM-MS Measurements

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Linear drift tube (DT) IM-MS measurements were performed on a modified Synapt G2-S HDMS instrument (Waters Corporation, Manchester, UK), described in detail elsewhere. 22 Measurements were performed in positive and negative ion mode with platinum/palladium (Pt/Pd, 80/20) coated borosilicate capillaries prepared in-house. Prior to measurements, each sample was diluted from stock solution with methanol : water (1 : 1) to result in a final concentration of 10 µM. Salt solutions were generated by adding a 10 mg mL -1 aqueous stock solution of KCl/LiCl/NaCl to the labelled glycan solution to result in a 1 : 5 ratio (salt : glycan).
For nano-electrospray ionization (nano-ESI) typically 5 µL of sample was loaded to a capillary and electrosprayed by apply-ing a capillary voltage of 0.6-1.1 kV. Typical parameters in positive ion mode were: 60 V sampling cone voltage, 1 V source offset voltage, 30 °C source temperature, 0 V trap CE (MS) up to 30 V trap CE (MSMS), 2 V transfer CE, 3 mL min -1 trap gas flow. Ion mobility parameters were: 2.
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