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17 protocols using ab47010

1

Evaluating Cellular Metabolic Regulators in Tumor Xenografts

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Cell lyzates, cytoplasmic lyzates, and nuclear extracts were prepared as previously described (Zhang et al., 2015 (link)). Primary antibodies for SIPA1 (Abcam, ab85928, RRID: AB_1925436), LDHA (Abcam, ab47010, RRID: AB_1952042), HK2 (Abcam, ab104836, RRID: AB_10710018), SLC2A1 (Abcam, ab115730), HIF-2α (Abcam, ab207607, RRID: AB_2618694), HIF-1α (Abcam, ab179483), c-myc (Cell Signaling Technology, Danvers, MA, 9,402), PDK1 (Abcam, ab207450), and secondary antibodies (Cell Signaling Technology, 91196 and 7,074) were used for blotting, and β-tubulin (Absin Bioscience Inc., Shanghai, China, abs830032) was included as a control. The relative amount of protein was quantitated by an ImageJ software.
For immunohistochemistry, the xenograft tumor tissue slides underwent deparaffinization, rehydration, and antigen-retrieval and were then incubated with the primary antibody: HIF-2α (Abcam, ab207607), SLC2A1 (Abcam, ab115730) or PDK1 (Abcam, ab207450). Staining image was monitored using 80i fluorescence microscope (Nikon, Tokyo, Japan).
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2

Western Blot and IHC for LDH Detection

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Western blot for LDH detection was performed as described previously26 (link) using a rabbit anti-LDH antibody (ab47010; Abcam) at a 1:5,000 dilution. Immunohistochemical detection of LDHA was performed in paraffin liver sections as described previously18 (link) using a rabbit polyclonal anti-LDHA antibody (1:50 dilution; Cell Signaling Technology, Danvers, MA, USA).
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3

Comprehensive Protein Expression Analysis

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Western blot analysis was performed as previously described. Briefly, cells were lysed in RIPA buffer to extract total proteins. Proteins were separated by SDS-PAGE gel and were electrically transferred to a polyvinylidene difluoride membrane. The membrane was blocked with 5% non-fat milk to prevent non-specific binding of antibodies and incubated with specific primary antibodies of KCNK3 (A14745, 1:1000, ABclonal, China), GLUT1 (ab115730, 1:10000, abcam, USA), LDHA (ab47010, 1 µg/ml, abcam, USA), AMPK (ab32047, 1:2000, abcam, USA), p-AMPK (2535 T 1:1000, CST, USA) and TXNIP (ab188865, 1:1000, abcam, USA) at 4 °C overnight. Corresponding HRP-conjugated secondary antibodies were incubated for 1 h at room temperature. Immunoreactive proteins were visualized using Image Quant LAS 4000 (GE Healthcare Life Science, Chicago, IL, USA).
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4

Adipose Tissue Immunofluorescence Analysis

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White adipose tissue was excised, fixed in formalin overnight, embedded in paraffin and sectioned. The immunofluorescence analysis of F4/80 (MCA497GA; Abd Serotec, NC, USA), lactate dehydrogenase (ab47010, Abcam)  and HIF-1α (NB100-479; Novus Biologicals, CO, USA) was conducted after deparaffinization as described previously23 (link). Sections were mounted and visualized using a Nikon Eclipse microscope.
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5

Quantitative Protein Expression Analysis

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Cells in each group were lysed with RIPA lysate, and protein concentrations were detected by a BCA kit. The protein was separated by SDS‐PAGE and transferred to a PVDF membrane. The membrane was blocked at room temperature for 1 h and incubated overnight at 4°C with anti‐GLUT1 (ab14683, 1:100, Abcam), LDHA (ab47010, 1:100, Abcam), Ki67 (ab15580, 1:100, Abcam), MMP‐2 (ab92536, 1:100, Abcam), MMP‐9 (ab283575, 1:100, Abcam), and GAPDH (ab8245, 1:100, Abcam). Wash the membrane twice the next day, add diluted enzyme‐labeled secondary antibody, and incubate at room temperature for 1 h. The chemiluminescence reagent was added to develop the protein, and the image was collected in the gel imaging system. The protein level was analyzed by Image J software. GAPDH was used as the internal reference to calculate the relative expression of the protein.
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6

Protein Extraction from Cancer Cells

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The protein extraction protocol from cancer cells was previously reported [30 (link)]. Briefly, cells were collected and lysed using Radio Immunoprecipitation Assay (RIPA) protein extraction reagent (Beyotime) with a protease inhibitor cocktail (Roche, IN, USA). Equal amounts of protein lysate were quantified using BCA kit (Thermo Fisher, USA), separated by 10% sodium dodecyl sulfate–polyacrylamide gel (SDS–PAGE) electrophoresis, and transferred onto a polyvinylidene fluoride (PVDF) membrane (Millipore, Billerica, MA, USA). The membrane was then sealed with 5% non-fat milk for 1 hour, and incubated with primary antibodies (Abcam, Cambridge, UK) against: FUS (ab84078, 1/1000), SLC10A1 (ab131084, 1/1000), β-actin (ab8227, 1/1000), GLUT1 (ab14683, 1/2500), HK2 (ab227198, 1/5000), LDHA (ab47010, 1/1000), PGK1 (ab154613, 1/1000) overnight at 4°C, with GAPDH (ab9485, 1/2500) as control. After washing, the membrane was incubated with goat anti-rabbit secondary antibody (ab96899, 1/1000, Abcam, Cambridge, UK) at 37°C for 1 hour. The protein bands were finally detected using enhanced chemiluminescence reagents (Bio-Rad, Hercules, CA, USA) according to manufacturer's instructions.
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7

Immunofluorescence Analysis of GLUT1 and LDHA

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H1975 and H1299 were seeded at 5.0 × 103 cells/well into 24-well plates. Cells were then fixed with 4% paraformaldehyde for 15 min and permeabilized with 0.5% Triton X-100 in PBS for 5 min. Subsequently, cells were incubated with appropriate concentrations of primary antibody of GLUT1 (ab115730, 1:200, abcam, USA) and LDHA (ab47010, 1 µg/ml, abcam, USA) at 4 °C overnight, and then probed with ProteinFind® Goat Anti-Rabbit IgG (H + L), AF488 Conjugate (HS131-01, 1:100, TransGen BioTech, China) for 60 min at room temperature away from light. Next, the secondary antibody solution was removed and the cells were washed thrice by PBS and then incubated with Hoechst for 15 min at room temperature in the dark. Immunofluorescence was visualized and photographed under a fluorescence microscope (OLYMPUS, Tokyo, Japan).
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8

Western Blot Analysis of LDH Isoforms

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Western blot analysis was done following a previously described procedure [43 (link)]. Antibodies against lactate dehydrogenase monomers and beta-actin were purchased from Abcam (Cambridge, United Kingdom) and used in the following concentrations: LDHA (1 µg/mL; ab47010), LDHB (0.1 µg/mL; ab85319), and β-actin (0.5 µg/mL; ab8226). Prior to loading onto the gel, nine samples from each group were pooled by three to obtain three final samples per group (Figure 2 shows two representative bands for each group cut from the same blot, for full blots, see Supplementary Information Figure S2). ImageJ software (National Institute of Health, Bethesda, Maryland, United States) was used for densitometric analyses of immunoreactive bands. Original band density was calculated as the sum of pixel intensities within a band. Final band density was obtained as the ratio of dots per band for the target protein averaged against β-actin (gel loading control). Protein expression is expressed in arbitrary units (AU) from three independent experiments.
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9

Metabolic Enzyme Expression Analysis

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Cells were firstly lysed in RIPA buffer supplemented with a cocktail of protease inhibitors. Cell lysates were centrifuged at 13000 g for 10 minutes at 4°C before aliquots of 20 μg proteins were resolved on SDS-PAGE, transferred onto polyvinylidenedifluoride transfer membrane(PVDF), and blotted for targeting antibodies:MPC1(HPA045119, Sigma-Aldrich, St. Louis, MO,USA, dilution 1:1000), MPC2(ab111380, abcam, Cambridge, UK, dilution 1:1000), GLUT1(Rabbit mAb#12939, cell signaling technology, Leiden, Netherlands, dilution 1:1000), HK2 (ab104836, abcam, Cambridge, UK, dilution 1:1000), LDHA (ab47010, abcam, Cambridge, UK, dilution 1:1000) and α-Tubulin antibody(T9026, Sigma-Aldrich, St. Louis, MO, USA dilution 1:3000).
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10

Western Blot Analysis of Metabolic Regulators

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Cells were lysed in Laemmeli buffer. Protein lysates were resolved by SDS-PAGE and transferred onto a PVDF membrane (Biorad). Membranes were blocked in 5% non-fat milk in TN buffer (50 mM Tris-HCl pH 7.4, 150 mM NaCl) or 5% BSA in TN buffer and incubated in the presence of the primary and then secondary antibodies. After washing in TN buffer containing 0.1% Tween, immunoreactive bands were visualized with the ECL system (Amersham Biosciences). Primary antibody for YAP1 (#4912; 1/1000) and YAP/TAZ (#8418; 1/1000) were obtained from Cell Signaling. Primary antibodies for GLS1 (ab156876; 1/1000), and LDHA (ab47010; 1/1000) were obtained from Abcam. Primary antibody for Tubulin (T4026; 1/5000) was obtained from Sigma Aldrich. Primary antibody for SLC1A3 (sc-7757; 1/200) was obtained from Santa Cruz Biotechnology. Appropriate secondary antibodies (antirabbit, anti-mouse and anti-goat) coupled to HRP were used (Dako).
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