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5 protocols using dmi 400b fluorescence microscope

1

Immunofluorescent detection of MDM2 and pSmad3

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Cells transfected with pCMVβ-myc3-MDM2 plasmid or empty vector were plated in 6-well plates. Then cells were fixed with 4% paraformaldehyde in PBS for 15 min, and blocked with 3% bovine serum albumin (Sigma-Aldrich, A7906) and 0.3% Triton X-100 in PBS for 1 h at room temperature. MDM2 and p-Smad3 was probed with primary antibodies anti-MDM2 (1 : 50) and anti-pSmad3 (1 : 150) in PBS overnight at 4 °C at room temperature and Alexa Fluor 488 donkey anti- rabbit IgG secondary antibody (Invitrogen, A-11008) or Alexa Fluor 568 donkey anti-mouse IgG secondary antibody (Invitrogen, A-10037) diluted in 1 : 500 in PBS for 1 h at 37 °C. Nuclei were visualised by staining with DAPI (4′ 6-diamidino-2-phenylindole; Sigma-Aldrich, D9542). Cells were than washed thrice with PBS and imaged with Leica DMI 400B fluorescence microscope.
anti-MDM2 (Cat# sc-965), anti-E-cadherin (Cat# sc-7870) were purchased from Santa Cruz (Santa Cruz), and anti-p-Smad3 (Cat# 9520) was from Cell Signaling Technology (Beverly, MA, USA).
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2

Quantifying DNA Damage in HepG2 Cells

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HepG2 cells were exposed to Q6 (50 μM) or TPZ (100 μM) for 1 h. For γ-H2AX foci assessment, the cells were fixed in 4% paraformaldehyde in PBS for 20 min at room temperature followed by three rinses in PBS and permeabilization in 0.1% Triton-X100 (in PBS) for 10 min at 4°C. Next, cells were blocked by 4% BSA and incubated with primary rabbit monoclonal antibody against γH2AX (1:200) for 10 h at 4°C. Following two rinses with PBS, cells were incubated for 1 hour with FITC-conjugated secondary antibody (1:200, A-21206, Invitrogen), and subjected to with DAPI staining (1 μg/mL) and imaged with Leica DMI 400B fluorescence microscope.
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3

Cell Proliferation Assay Using BrdU

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Cells were seeded in 6-well plates at a cell density of 1 × 104 cells/well in reduced serum and growth factor-containing DMEM and treated with the reagents as described above. After treatment for 24 h, BrdU was added at a final concentration of 30 µg/L in the medium, and incubated with the cells for 4 h. The cells were fixed with methanol containing 0.04 % H2O2 for 15 min; they were then incubated in 2 N hydrochloric acid at 37 °C for 1 h. Subsequently, the cells were blocked in 5 % bovine serum albumin (BSA) for 20 min at room temperature, and were then incubated overnight with the BrdU antibody (1:200 dilution) at 4 °C. After the first antibody was washed off, the cells were incubated with goat anti-mouse IgG-FITC (1:50 dilution) for 30 min at room temperature lucifugally. This was followed by excitation at 494 nm, after which BrdU-positive cells were counted under the Leica DMI 400B fluorescence microscope under 200× magnification.
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4

Evaluating Tumor Hypoxia and YAP Localization

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HepG2 cells were collected and inoculating subcutaneously into nude mice. After the tumor size reached a mean group size of 300–500 mm3, the hypoxia probe Hypoxyprobe-1 (Pimonidazole Hydrochloride, PIMO) (60 mg/kg) was injected intraperitoneally to indicate tumor hypoxic regions. One hour later, the tumors were removed and cut into frozen slices. For detection of the intratumor and subcellular localization of YAP, the cells grown in glass bottom dishes (Thermo Scientific Nunc Lab-Tek) as well as the frozen slices were fixed with 4% paraformaldehyde, and blocked with 5% BSA, and incubated with anti-YAP antibody (Cell Signaling Technology, Beverly, Mass) and FITC-conjugated secondary antibody (Invitrogen). The slides were than stained with DAPI and imaged with Leica DMI 400B fluorescence microscope.
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5

Osteocalcin Immunostaining in Cells

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Cells grown and treated in 96-well plates were fixed with 4% formaldehyde in PBS for 15 min, washed two times with PBS, and blocked with 5% FBS and 1% Triton X-100 in PBS for 1 h at room temperature. Osteocalcin were detected with antibody (SC-74495) from Santa Cruz Biotechnology Inc. and PE-conjugated secondary antibody diluted 1∶100 in PBS for 2 h at room temperature. Cells were then washed three times in PBS and imaged with a Leica DMI 400B fluorescence microscope.
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