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Anti pgk1 antibody

Manufactured by Thermo Fisher Scientific
Sourced in Italy, Japan, United States

The Anti-Pgk1 antibody is a laboratory reagent used for the detection and quantification of Pgk1 protein in biological samples. Pgk1, or Phosphoglycerate kinase 1, is an enzyme involved in the glycolytic pathway. The antibody can be utilized in various immunoassay techniques, such as Western blotting, immunohistochemistry, or immunoprecipitation, to study the expression and localization of Pgk1 in cells and tissues.

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26 protocols using anti pgk1 antibody

1

Yeast Cell Lysis and Western Blot

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We collected 1.5 ml yeast cell culture and the cell pellets were resuspended in 100 µl H2O and then 100 µl 0.2 M NaOH was added. The mixture was left at room temperature for 5 min. The pellet was resuspended in the loading buffer. We used 10% Acrylamide gels for SDS-PAGE. The anti-HA (16B12) (Covance Research Products, Inc.) was used at a 1:750 dilution. The anti-Pgk1 antibody (Molecular Probes, Eugene, OR) was used at 1:10,000 dilution. Proteins were detected with ECL (Perkin-Elmar LAS, Inc.).
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2

Alkaline Protein Sample Preparation

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Protein samples were prepared using an alkaline method and resolved by 10% SDS–PAGE. Anti-Flag antibody was purchased from Sigma-Aldrich (St. Louis, MO); anti-GFP antibody was from Santa Cruz Biotechnology (Santa Cruz, CA); anti-Pgk1 antibody was from Molecular Probes (Eugene, OR); anti-HA antibody was from Covance Research Products (San Diego, CA). The horseradish peroxidase–conjugated goat anti-mouse IgG secondary antibody was from Santa Cruz Biotechnology (Santa Cruz, CA).
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3

Protein Isolation and Western Blot Analysis

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Protein was isolated from cells pellets with FA-1 lysis buffer (50 mM HEPES pH 7.5, 150 mM NaCl, 1 mM ethylenediaminetetraacetic acid (EDTA), 1% Triton X-100, 0.1% Sodium Deoxycholate, 1 mM phenylmethylsulfonyl fluoride (PMSF) and protease inhibitors) using bead-beating. The buffer was supplemented with protease inhibitor cocktail tablet (Roche). Total protein was resolved by sodium dodecyl sulphate-polyacrylamide gel electrophoresis. The gel was transferred to Polyvinylidene fluoride (PVDF) membrane, probed with anti-SNF2 antibody (yN-20, Santa Cruz) at a 1:200 dilution in 2% milk or anti-acetylated lysine (ST1027, Millipore) at a 1:2000 dilution in 5% milk. Signal was detected using ECL (Thermo Scientific) as per the manufacturer's instructions. For Pgk1 western blotting, the membrane was probed with anti Pgk1 antibody (Molecular probes) at a 1:3000 dilution in 5% milk.
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4

Protein Sample Preparation and Immunoblotting

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Protein samples were prepared using an alkaline method and resolved by 10% SDS–PAGE. Anti-Myc antibody was purchased from Covance (Madison, WI); anti-Flag antibody was from Sigma-Aldrich (St. Louis, MO); anti-GFP antibody was from Santa Cruz Biotechnology (Santa Cruz, CA); and anti-Pgk1 antibody was from Molecular Probes (Eugene, OR). The horseradish peroxidase–conjugated goat anti-mouse immunoglobulin G secondary antibody was purchased from Jackson ImmunoResearch (West Grove, PA).
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5

Yeast Protein Extraction and Detection

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Yeast cells (1.5 ml) were collected by centrifugation and the cell pellets were resuspended in 200μl 0.1 M NaOH. After incubation at room temperature for 5 min, the samples were centrifuged and the pellets were resuspended in 100μl 1×SDS protein loading buffer. The protein samples were boiled for 5 min and resolved by 8% SDS-PAGE. After probing with antimyc or anti-HA primary antibodies (Covance Research Products, Inc.) followed by HRP-conjugated secondary antibody (Jackson ImmunoResearch, Inc.), the proteins were detected with ECL (Perkin Elmer LAS, Inc.). We used anti-Pgk1 antibody (Molecular Probes) to detect Pgk1 protein levels, which are used as a loading control.
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6

Western Blot Protein Quantification

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At each timepoint, three OD eq of cells were harvested and centrifuged at 14,000 × g for 2 min. Cell pellets were then resuspended in 100 µl SUME buffer (1% SDS, 8 M urea, 10 mM MOPS, 10 mM EDTA, pH 6.8) with protease inhibitors (1 mM phenylmethylsulfonyl fluoride, 260 mM 4-(2-aminoethyl) benzenesulfonyl fluoride hydrochloride, 100 mM leupeptin hemisulfate, 76 mM pepstatin A, 5 mM 6-aminocaproic acid, 5 mM benzamidine, and 142 mM TPCK). Silica beads were then added, and cells were lysed on a multivortexer (1 min of vortexing at room temperature followed by 1 min on ice, repeated three times). A 100 µl of 2X urea sample buffer (8 M urea, 4% SDS, 200 mM dithiothreitol, 125 mM Tris, pH 6.8) was added to each lysed sample, and the mixture was then boiled at 95°C for 8 min. Finally, samples were centrifuged at 14,000 × g for 5 min.
In all cases, samples were resolved on 10% acrylamide gels by SDS–PAGE, transferred to nitrocellulose in 13% methanol, and blotted with mouse monoclonal anti-GFP antibody (Living Colors) or anti-PGK1 antibody (Molecular Probes) followed by goat anti-mouse HRP-conjugated secondary antibody (Jackson ImmunoResearch).
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7

Western Blot Protein Extraction

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Three OD eq cells were harvested by centrifugation at 14,000 × g for 5 min. Pellets were resuspended in 100 µl SUME (SDS, urea, MOPS, ETDA) buffer (1% SDS, 8 M urea, 10 mM MOPS, 10 mM EDTA, pH 6.8) with protease inhibitors (PIs) (1 mM phenylmethylsulfonyl fluoride, 260 mM 4-(2-aminoethyl) benzenesulfonyl fluoride hydrochloride, 100 mM leupeptin hemisulfate, 76 mM pepstatin A, 5 mM 6-aminocaproic acid, 5 mM benzamidine, and 142 mM tosyl phenylalanyl chloromethyl ketone [TPCK]), and 0.5 mm glass beads were added to the meniscus. Cells were lysed three times at 1-min intervals on a multivortexer at room temperature with 1 min on ice in between. After the addition of 100 µl 2× urea sample buffer (2× USB: 8 M urea, 4% SDS, 200 mM dithiothreitol [DTT], 125 mM Tris, pH 6.8), samples were heated at 95°C for 10 min and clarified by centrifugation at 14,000 × g for 5 min. Samples were resolved by SDS–PAGE, transferred to nitrocellulose in 12% methanol, and blotted with mouse monoclonal anti-GFP antibody (Living Colors), anti-HA antibody (Thermo Fisher Scientific), or anti-PGK1 antibody (Molecular Probes) (loading control) followed by goat anti-mouse HRP-conjugated secondary antibody (Jackson ImmunoResearch).
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8

Yeast Cytoplasmic-Membrane Fractionation

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Equal amounts of cells were collected and quenched using TCA 6% and lysed in lysis buffer (6M UREA, 1% SDS, 50 mM Tris-HCl pH7.5, 5 mM EDTA). The cytoplasmic-membrane fractionation experiment was conducted using the MEM-PER kit (Thermo), following the manufacturer’s instructions on yeast spheroplasts. Western blot analysis was performed using anti-Synuclein antibody (1:1000, Sigma Aldrich), anti-Pgk1 antibody (1:1000, Molecular Probes, used as loading control and cytoplasmic marker) and anti-Pma1 antibody (1:1500, Abcam, used as membrane marker).
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9

Antibodies and Reagents for Protein Analysis

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Rat monoclonal anti‐hemagglutinin (HA) antibody (clone 3F10) was purchased from Roche and used at 1:2,000 dilution for immunoblot and 1:1,000 for immunoprecipitation; mouse anti‐myc antibody was purchased from Roche and used at 1:1,000 dilution; rabbit polyclonal anti‐GFP and anti‐Kar2 antibodies were purchased from Santa Cruz Biotechnology and used at 1:1,000 dilution; anti‐Pgk1 antibody was purchased from Invitrogen and used at 1:10,000 dilution; rat monoclonal (3H9) anti‐GFP antibody was purchased from Chromotek and used at 1:2,000 dilution; anti‐Dpm1 antibody was purchased from Life Technologies and used at 1:3,000 dilution; rabbit polyclonal anti‐Erg1 antibody was raised against the full‐length protein as described in Foresti et al (2013). Cycloheximide (Sigma‐Aldrich) was used at 250 μg/ml. Monodansyl pentane (MDH) was purchased from Abgent and used at 0.1 mM. All other reagents and chemicals were purchased from Sigma‐Aldrich.
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10

Immunoblotting for Protein Detection

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Extracts were prepared as described previously (23 (link), 24 (link), 33 (link)). Extracts were subjected to SDS-PAGE on 8% acrylamide gels followed by electroblotting onto an Immobilon membrane (Millipore). To detect myc-tagged and hemagglutinin (HA)-tagged proteins, the membrane was incubated with anti-myc antibody (9E10; Santa Cruz Biotechnology) (1:2,000) and anti-HA antibody (HA11; Santa Cruz Biotechnology) (1:2,000), respectively, and then with HRP-labeled secondary antibody (Calbiochem) (1:4,000). To control for equal loading of the lanes, the blots were probed with anti-Mcm2 antibody (Santa Cruz Biotechnology) (1:1,000) or anti-Pgk1 antibody (Invitrogen) (1:1,000) and peroxidase-conjugated secondary antibody (Calbiochem) (1:3,000).
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